RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 TMPOP42166 694 aaKnown RBP12.13□□□□□ -0.47
DNMT1-223ENST00000591239 RIPK4P57078 832 aa12.13□□□□□ -0.47
DNMT1-223ENST00000591239 RUNDC1Q96C34 613 aa12.13□□□□□ -0.47
DNMT1-223ENST00000591239 SYT17Q9BSW7 474 aa12.13□□□□□ -0.47
DNMT1-223ENST00000591239 HEG1Q9ULI3 1381 aa12.13□□□□□ -0.47
DNMT1-223ENST00000591239 STARD3NLO95772 234 aa12.12□□□□□ -0.47
DNMT1-223ENST00000591239 THUMPD2Q9BTF0 503 aaKnown RBP12.12□□□□□ -0.47
DNMT1-223ENST00000591239 TEX13AQ9BXU3 409 aaPredicted RBP12.12□□□□□ -0.47
DNMT1-223ENST00000591239 MIS18AQ9NYP9 233 aa12.12□□□□□ -0.47
DNMT1-223ENST00000591239 CCDC184Q52MB2 194 aa12.11□□□□□ -0.47
DNMT1-223ENST00000591239 ZBTB1Q9Y2K1 713 aa12.11□□□□□ -0.47
DNMT1-223ENST00000591239 RRP7AQ9Y3A4 280 aaKnown RBP12.11□□□□□ -0.47
DNMT1-223ENST00000591239 ZBTB22O15209 634 aa12.1□□□□□ -0.47
DNMT1-223ENST00000591239 GYS1P13807 737 aa12.1□□□□□ -0.47
DNMT1-223ENST00000591239 LMOD3Q0VAK6 560 aa12.1□□□□□ -0.47
DNMT1-223ENST00000591239 NEUROD2Q15784 382 aa12.1□□□□□ -0.47
DNMT1-223ENST00000591239 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
DNMT1-223ENST00000591239 NLGN1Q8N2Q7 840 aa12.1□□□□□ -0.47
DNMT1-223ENST00000591239 PNISRQ8TF01 805 aaKnown RBP12.1□□□□□ -0.47
DNMT1-223ENST00000591239 SOS1Q07889 1333 aaPredicted RBP12.1□□□□□ -0.47
DNMT1-223ENST00000591239 SNRPA1P09661 255 aaKnown RBP12.09□□□□□ -0.47
DNMT1-223ENST00000591239 CANXP27824 592 aaKnown RBP12.09□□□□□ -0.47
DNMT1-223ENST00000591239 SRP68Q9UHB9 627 aaKnown RBP12.09□□□□□ -0.47
DNMT1-223ENST00000591239 USP16Q9Y5T5 823 aa12.09□□□□□ -0.47
DNMT1-223ENST00000591239 USP42Q9H9J4 1324 aaKnown RBP12.09□□□□□ -0.47
DNMT1-223ENST00000591239 PRAMEF22A3QJZ6 481 aa12.08□□□□□ -0.48
DNMT1-223ENST00000591239 ZPR1O75312 459 aa12.08□□□□□ -0.48
DNMT1-223ENST00000591239 A1BGP04217 495 aa12.08□□□□□ -0.48
DNMT1-223ENST00000591239 MMP10P09238 476 aa12.08□□□□□ -0.48
DNMT1-223ENST00000591239 C4AP0C0L4 1744 aa12.08□□□□□ -0.48
DNMT1-223ENST00000591239 COL15A1P39059 1388 aa12.07□□□□□ -0.48
DNMT1-223ENST00000591239 EIF5P55010 431 aaKnown RBP12.07□□□□□ -0.48
DNMT1-223ENST00000591239 TRIM35Q9UPQ4 493 aa12.07□□□□□ -0.48
DNMT1-223ENST00000591239 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
DNMT1-223ENST00000591239 APAF1O14727 1248 aa12.06□□□□□ -0.48
DNMT1-223ENST00000591239 IL6STP40189 918 aaPredicted RBP12.06□□□□□ -0.48
DNMT1-223ENST00000591239 EIF4A1P60842 406 aaKnown RBP12.06□□□□□ -0.48
DNMT1-223ENST00000591239 FKBP8Q14318 412 aa12.06□□□□□ -0.48
DNMT1-223ENST00000591239 USPL1Q5W0Q7 1092 aa12.06□□□□□ -0.48
DNMT1-223ENST00000591239 NLGN2Q8NFZ4 835 aa12.06□□□□□ -0.48
DNMT1-223ENST00000591239 MRS2Q9HD23 443 aa12.06□□□□□ -0.48
DNMT1-223ENST00000591239 NARFQ9UHQ1 456 aa12.06□□□□□ -0.48
DNMT1-223ENST00000591239 TSPYL4Q9UJ04 414 aa12.06□□□□□ -0.48
DNMT1-223ENST00000591239 CD2APQ9Y5K6 639 aa12.06□□□□□ -0.48
DNMT1-223ENST00000591239 A0A087WZG4 1122 aa12.05□□□□□ -0.48
DNMT1-223ENST00000591239 GIGYF1O75420 1035 aaPredicted RBP12.05□□□□□ -0.48
DNMT1-223ENST00000591239 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
DNMT1-223ENST00000591239 BABAM1Q9NWV8 329 aa12.05□□□□□ -0.48
DNMT1-223ENST00000591239 ZNF330Q9Y3S2 320 aaPredicted RBP12.05□□□□□ -0.48
DNMT1-223ENST00000591239 KDM3BQ7LBC6 1761 aa12.05□□□□□ -0.48
DNMT1-223ENST00000591239 PIP4K2AP48426 406 aaPredicted RBP12.04□□□□□ -0.48
DNMT1-223ENST00000591239 NPM2Q86SE8 214 aaKnown RBP12.04□□□□□ -0.48
DNMT1-223ENST00000591239 PARP3Q9Y6F1 533 aa12.04□□□□□ -0.48
DNMT1-223ENST00000591239 CHL1O00533 1208 aa12.03□□□□□ -0.48
DNMT1-223ENST00000591239 TM4SF1P30408 202 aa12.03□□□□□ -0.48
DNMT1-223ENST00000591239 BCL2L12Q9HB09 334 aa12.03□□□□□ -0.48
DNMT1-223ENST00000591239 TBC1D2BQ9UPU7 963 aa12.03□□□□□ -0.48
DNMT1-223ENST00000591239 LAS1LQ9Y4W2 734 aaKnown RBP12.03□□□□□ -0.48
DNMT1-223ENST00000591239 NBPF26B4DH59 902 aa12.02□□□□□ -0.49
DNMT1-223ENST00000591239 HOXD11P31277 338 aaPredicted RBP12.02□□□□□ -0.49
DNMT1-223ENST00000591239 DDR1Q08345 913 aa12.02□□□□□ -0.49
DNMT1-223ENST00000591239 GPR162Q16538 588 aa12.02□□□□□ -0.49
DNMT1-223ENST00000591239 NBPF10Q6P3W6 841 aaKnown RBP12.02□□□□□ -0.49
DNMT1-223ENST00000591239 NBPF15Q8N660 670 aa12.02□□□□□ -0.49
DNMT1-223ENST00000591239 POLRMTO00411 1230 aaKnown RBP12.01□□□□□ -0.49
DNMT1-223ENST00000591239 NFIXQ14938 502 aa12.01□□□□□ -0.49
DNMT1-223ENST00000591239 DZIP3Q86Y13 1208 aaKnown RBP12.01□□□□□ -0.49
DNMT1-223ENST00000591239 CAMTA2O94983 1202 aa12□□□□□ -0.49
DNMT1-223ENST00000591239 CALD1Q05682 793 aaKnown RBP12□□□□□ -0.49
DNMT1-223ENST00000591239 PELP1Q8IZL8 1130 aaKnown RBP12□□□□□ -0.49
DNMT1-223ENST00000591239 CFAP44Q96MT7 982 aa12□□□□□ -0.49
DNMT1-223ENST00000591239 TGFB2P61812 414 aa11.99□□□□□ -0.49
DNMT1-223ENST00000591239 TBC1D9BQ66K14 1250 aa11.99□□□□□ -0.49
DNMT1-223ENST00000591239 BICDL1Q6ZP65 573 aa11.99□□□□□ -0.49
DNMT1-223ENST00000591239 C10orf71Q711Q0 1435 aa11.99□□□□□ -0.49
DNMT1-223ENST00000591239 LAMB4A4D0S4 1761 aa11.99□□□□□ -0.49
DNMT1-223ENST00000591239 SENP3-EIF4A1A0A087X0R7 540 aa11.98□□□□□ -0.49
DNMT1-223ENST00000591239 SERPINB2P05120 415 aa11.98□□□□□ -0.49
DNMT1-223ENST00000591239 ZNF853P0CG23 659 aa11.98□□□□□ -0.49
DNMT1-223ENST00000591239 MYL6BP14649 208 aa11.98□□□□□ -0.49
DNMT1-223ENST00000591239 YBX3P16989 372 aaKnown RBP eCLIP11.98□□□□□ -0.49
DNMT1-223ENST00000591239 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
DNMT1-223ENST00000591239 KRT24Q2M2I5 525 aa11.98□□□□□ -0.49
DNMT1-223ENST00000591239 NGEFQ8N5V2 710 aa11.98□□□□□ -0.49
DNMT1-223ENST00000591239 IFT57Q9NWB7 429 aa11.98□□□□□ -0.49
DNMT1-223ENST00000591239 KIF13BQ9NQT8 1826 aa11.97□□□□□ -0.49
DNMT1-223ENST00000591239 SCN7AQ01118 1682 aa11.97□□□□□ -0.49
DNMT1-223ENST00000591239 ERBB4Q15303 1308 aa11.97□□□□□ -0.49
DNMT1-223ENST00000591239 A0A0G2JLW4 131 aa11.97□□□□□ -0.49
DNMT1-223ENST00000591239 GNAI1P63096 354 aa11.97□□□□□ -0.49
DNMT1-223ENST00000591239 CCDC27Q2M243 656 aa11.97□□□□□ -0.49
DNMT1-223ENST00000591239 CLEC4GQ6UXB4 293 aa11.97□□□□□ -0.49
DNMT1-223ENST00000591239 FAM9BQ8IZU0 186 aa11.97□□□□□ -0.49
DNMT1-223ENST00000591239 SETDB2Q96T68 719 aa11.97□□□□□ -0.49
DNMT1-223ENST00000591239 MBIPQ9NS73 344 aa11.97□□□□□ -0.49
DNMT1-223ENST00000591239 ZNF652Q9Y2D9 606 aa11.97□□□□□ -0.49
DNMT1-223ENST00000591239 PXDNLA1KZ92 1463 aa11.96□□□□□ -0.49
DNMT1-223ENST00000591239 PDIA6Q15084 440 aa11.96□□□□□ -0.49
DNMT1-223ENST00000591239 WWC1Q8IX03 1113 aa11.96□□□□□ -0.49
DNMT1-223ENST00000591239 NECTIN2Q92692 538 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms