RNA–Protein interactions for RNA: ENST00000590953.5

RANBP3-219, Transcript of RAN binding protein 3, humanhuman

TSL 3

Gene RANBP3, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-219ENST00000590953 RTCBQ9Y3I0 505 aaKnown RBP12.86□□□□□ -0.35
RANBP3-219ENST00000590953 GNPATO15228 680 aa12.85□□□□□ -0.35
RANBP3-219ENST00000590953 TSR2Q969E8 191 aaKnown RBP12.85□□□□□ -0.35
RANBP3-219ENST00000590953 CHMP4AQ9BY43 222 aa12.85□□□□□ -0.35
RANBP3-219ENST00000590953 USP16Q9Y5T5 823 aa12.85□□□□□ -0.35
RANBP3-219ENST00000590953 SOS1Q07889 1333 aaPredicted RBP12.85□□□□□ -0.35
RANBP3-219ENST00000590953 PRAMEF22A3QJZ6 481 aa12.84□□□□□ -0.35
RANBP3-219ENST00000590953 RPS6KA4O75676 772 aa12.84□□□□□ -0.35
RANBP3-219ENST00000590953 ADRA2BP18089 450 aa12.84□□□□□ -0.35
RANBP3-219ENST00000590953 SSFA2P28290 1259 aa12.84□□□□□ -0.35
RANBP3-219ENST00000590953 INTS5Q6P9B9 1019 aaKnown RBP12.84□□□□□ -0.35
RANBP3-219ENST00000590953 FANCIQ9NVI1 1328 aa12.84□□□□□ -0.35
RANBP3-219ENST00000590953 PSDA5PKW4 1024 aaPredicted RBP12.83□□□□□ -0.36
RANBP3-219ENST00000590953 TRAPPC3LQ5T215 181 aa12.83□□□□□ -0.36
RANBP3-219ENST00000590953 DUSP27Q5VZP5 1158 aa12.83□□□□□ -0.36
RANBP3-219ENST00000590953 NPM2Q86SE8 214 aaKnown RBP12.83□□□□□ -0.36
RANBP3-219ENST00000590953 SPINK5Q9NQ38 1064 aaPredicted RBP12.83□□□□□ -0.36
RANBP3-219ENST00000590953 ZBTB1Q9Y2K1 713 aa12.83□□□□□ -0.36
RANBP3-219ENST00000590953 LAMB4A4D0S4 1761 aa12.83□□□□□ -0.36
RANBP3-219ENST00000590953 ERBB4Q15303 1308 aa12.83□□□□□ -0.36
RANBP3-219ENST00000590953 ZBED9Q6R2W3 1325 aa12.83□□□□□ -0.36
RANBP3-219ENST00000590953 QSER1Q2KHR3 1735 aa12.82□□□□□ -0.36
RANBP3-219ENST00000590953 MYH14Q7Z406 1995 aaKnown RBP12.82□□□□□ -0.36
RANBP3-219ENST00000590953 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.82□□□□□ -0.36
RANBP3-219ENST00000590953 MSH5O43196 834 aa12.82□□□□□ -0.36
RANBP3-219ENST00000590953 PHF14O94880 888 aa12.82□□□□□ -0.36
RANBP3-219ENST00000590953 A1BGP04217 495 aa12.82□□□□□ -0.36
RANBP3-219ENST00000590953 EIF2S2P20042 333 aaKnown RBP12.82□□□□□ -0.36
RANBP3-219ENST00000590953 CANXP27824 592 aaKnown RBP12.82□□□□□ -0.36
RANBP3-219ENST00000590953 IL6STP40189 918 aaPredicted RBP12.82□□□□□ -0.36
RANBP3-219ENST00000590953 SLFN5Q08AF3 891 aa12.82□□□□□ -0.36
RANBP3-219ENST00000590953 KRT24Q2M2I5 525 aa12.82□□□□□ -0.36
RANBP3-219ENST00000590953 PNPLA7Q6ZV29 1317 aa12.82□□□□□ -0.36
RANBP3-219ENST00000590953 UBR3Q6ZT12 1888 aa12.81□□□□□ -0.36
RANBP3-219ENST00000590953 A0A087WZG4 1122 aa12.81□□□□□ -0.36
RANBP3-219ENST00000590953 HDGFL1Q5TGJ6 251 aa12.81□□□□□ -0.36
RANBP3-219ENST00000590953 C8orf58Q8NAV2 365 aa12.81□□□□□ -0.36
RANBP3-219ENST00000590953 SLC16A10Q8TF71 515 aa12.81□□□□□ -0.36
RANBP3-219ENST00000590953 ELL2O00472 640 aaPredicted RBP12.8□□□□□ -0.36
RANBP3-219ENST00000590953 RFC4P35249 363 aa12.8□□□□□ -0.36
RANBP3-219ENST00000590953 EIF5P55010 431 aaKnown RBP12.8□□□□□ -0.36
RANBP3-219ENST00000590953 EXOSC9Q06265 439 aaKnown RBP12.8□□□□□ -0.36
RANBP3-219ENST00000590953 TWISTNBQ3B726 338 aaPredicted RBP12.8□□□□□ -0.36
RANBP3-219ENST00000590953 COL23A1Q86Y22 540 aaPredicted RBP12.8□□□□□ -0.36
RANBP3-219ENST00000590953 ARHGEF1Q92888 912 aaKnown RBP12.8□□□□□ -0.36
RANBP3-219ENST00000590953 TUBGCP6Q96RT7 1819 aa12.8□□□□□ -0.36
RANBP3-219ENST00000590953 COL15A1P39059 1388 aa12.8□□□□□ -0.36
RANBP3-219ENST00000590953 CCDC30Q5VVM6 783 aa12.79□□□□□ -0.36
RANBP3-219ENST00000590953 AMIGO3Q86WK7 504 aa12.79□□□□□ -0.36
RANBP3-219ENST00000590953 TRMT2AQ8IZ69 625 aaKnown RBP12.79□□□□□ -0.36
RANBP3-219ENST00000590953 TSPYL6Q8N831 410 aa12.79□□□□□ -0.36
RANBP3-219ENST00000590953 CDCA7LQ96GN5 454 aa12.79□□□□□ -0.36
RANBP3-219ENST00000590953 NBPF26B4DH59 902 aa12.78□□□□□ -0.36
RANBP3-219ENST00000590953 ZPR1O75312 459 aa12.78□□□□□ -0.36
RANBP3-219ENST00000590953 NBPF10Q6P3W6 841 aaKnown RBP12.78□□□□□ -0.36
RANBP3-219ENST00000590953 SMIM5Q71RC9 77 aa12.78□□□□□ -0.36
RANBP3-219ENST00000590953 NBPF15Q8N660 670 aa12.78□□□□□ -0.36
RANBP3-219ENST00000590953 NECTIN2Q92692 538 aa12.78□□□□□ -0.36
RANBP3-219ENST00000590953 DDX21Q9NR30 783 aaKnown RBP eCLIP12.78□□□□□ -0.36
RANBP3-219ENST00000590953 DBF4Q9UBU7 674 aaPredicted RBP12.78□□□□□ -0.36
RANBP3-219ENST00000590953 ZNF330Q9Y3S2 320 aaPredicted RBP12.78□□□□□ -0.36
RANBP3-219ENST00000590953 CASZ1Q86V15 1759 aa12.77□□□□□ -0.36
RANBP3-219ENST00000590953 VAMP4O75379 141 aa12.77□□□□□ -0.37
RANBP3-219ENST00000590953 MYL6BP14649 208 aa12.77□□□□□ -0.37
RANBP3-219ENST00000590953 PIP4K2AP48426 406 aaPredicted RBP12.77□□□□□ -0.37
RANBP3-219ENST00000590953 PDGFDQ9GZP0 370 aaPredicted RBP12.77□□□□□ -0.37
RANBP3-219ENST00000590953 PDIA6Q15084 440 aa12.76□□□□□ -0.37
RANBP3-219ENST00000590953 DZIP3Q86Y13 1208 aaKnown RBP12.76□□□□□ -0.37
RANBP3-219ENST00000590953 ARXQ96QS3 562 aa12.76□□□□□ -0.37
RANBP3-219ENST00000590953 STK31Q9BXU1 1019 aa12.76□□□□□ -0.37
RANBP3-219ENST00000590953 MTFR1LQ9H019 292 aa12.76□□□□□ -0.37
RANBP3-219ENST00000590953 HYPKQ9NX55 129 aa12.76□□□□□ -0.37
RANBP3-219ENST00000590953 CHPF2Q9P2E5 772 aa12.76□□□□□ -0.37
RANBP3-219ENST00000590953 NARFQ9UHQ1 456 aa12.76□□□□□ -0.37
RANBP3-219ENST00000590953 USP42Q9H9J4 1324 aaKnown RBP12.76□□□□□ -0.37
RANBP3-219ENST00000590953 ZBTB7AO95365 584 aa12.75□□□□□ -0.37
RANBP3-219ENST00000590953 CT47B1P0C2W7 299 aaPredicted RBP12.75□□□□□ -0.37
RANBP3-219ENST00000590953 KIF6Q6ZMV9 814 aa12.75□□□□□ -0.37
RANBP3-219ENST00000590953 NLGN1Q8N2Q7 840 aa12.75□□□□□ -0.37
RANBP3-219ENST00000590953 ZNF428Q96B54 188 aa12.75□□□□□ -0.37
RANBP3-219ENST00000590953 SPON1Q9HCB6 807 aa12.75□□□□□ -0.37
RANBP3-219ENST00000590953 TBC1D2BQ9UPU7 963 aa12.75□□□□□ -0.37
RANBP3-219ENST00000590953 GYS1P13807 737 aa12.74□□□□□ -0.37
RANBP3-219ENST00000590953 PROSER3Q2NL68 480 aa12.74□□□□□ -0.37
RANBP3-219ENST00000590953 USPL1Q5W0Q7 1092 aa12.74□□□□□ -0.37
RANBP3-219ENST00000590953 LRP10Q7Z4F1 713 aa12.74□□□□□ -0.37
RANBP3-219ENST00000590953 SRP68Q9UHB9 627 aaKnown RBP12.74□□□□□ -0.37
RANBP3-219ENST00000590953 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
RANBP3-219ENST00000590953 RGL2O15211 777 aa12.73□□□□□ -0.37
RANBP3-219ENST00000590953 ANXA1P04083 346 aa12.73□□□□□ -0.37
RANBP3-219ENST00000590953 POLD1P28340 1107 aa12.73□□□□□ -0.37
RANBP3-219ENST00000590953 COPS6Q7L5N1 327 aa12.73□□□□□ -0.37
RANBP3-219ENST00000590953 YTHDC1Q96MU7 727 aaKnown RBP12.73□□□□□ -0.37
RANBP3-219ENST00000590953 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
RANBP3-219ENST00000590953 ZNF652Q9Y2D9 606 aa12.73□□□□□ -0.37
RANBP3-219ENST00000590953 MAP3K15Q6ZN16 1313 aa12.72□□□□□ -0.37
RANBP3-219ENST00000590953 ERVV-1B6SEH8 477 aa12.72□□□□□ -0.37
RANBP3-219ENST00000590953 CAMTA2O94983 1202 aa12.72□□□□□ -0.37
RANBP3-219ENST00000590953 SLC4A2P04920 1241 aa12.72□□□□□ -0.37
RANBP3-219ENST00000590953 AIMP1Q12904 312 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms