RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 NLGN1Q8N2Q7 840 aa28.32■■■□□ 2.12
LRP3-202ENST00000590275 CD2APQ9Y5K6 639 aa28.32■■■□□ 2.12
LRP3-202ENST00000590275 BCL2L12Q9HB09 334 aa28.31■■■□□ 2.12
LRP3-202ENST00000590275 USP16Q9Y5T5 823 aa28.31■■■□□ 2.12
LRP3-202ENST00000590275 DLG5Q8TDM6 1919 aa28.3■■■□□ 2.12
LRP3-202ENST00000590275 COL15A1P39059 1388 aa28.3■■■□□ 2.12
LRP3-202ENST00000590275 A1BGP04217 495 aa28.3■■■□□ 2.12
LRP3-202ENST00000590275 YBX3P16989 372 aaKnown RBP eCLIP28.3■■■□□ 2.12
LRP3-202ENST00000590275 DDR1Q08345 913 aa28.3■■■□□ 2.12
LRP3-202ENST00000590275 TAF7Q15545 349 aaPredicted RBP28.3■■■□□ 2.12
LRP3-202ENST00000590275 CCDC184Q52MB2 194 aa28.3■■■□□ 2.12
LRP3-202ENST00000590275 USPL1Q5W0Q7 1092 aa28.3■■■□□ 2.12
LRP3-202ENST00000590275 ADAMTS8Q9UP79 889 aa28.3■■■□□ 2.12
LRP3-202ENST00000590275 EIF5P55010 431 aaKnown RBP28.29■■■□□ 2.12
LRP3-202ENST00000590275 MAPK8IP3Q9UPT6 1336 aa28.28■■■□□ 2.12
LRP3-202ENST00000590275 PIP4K2AP48426 406 aaPredicted RBP28.28■■■□□ 2.12
LRP3-202ENST00000590275 RRP7AQ9Y3A4 280 aaKnown RBP28.28■■■□□ 2.12
LRP3-202ENST00000590275 STARD3NLO95772 234 aa28.27■■■□□ 2.12
LRP3-202ENST00000590275 TMPOP42166 694 aaKnown RBP28.27■■■□□ 2.12
LRP3-202ENST00000590275 NEFMP07197 916 aa28.26■■■□□ 2.11
LRP3-202ENST00000590275 TM4SF1P30408 202 aa28.26■■■□□ 2.11
LRP3-202ENST00000590275 NARFQ9UHQ1 456 aa28.26■■■□□ 2.11
LRP3-202ENST00000590275 RIPK4P57078 832 aa28.25■■■□□ 2.11
LRP3-202ENST00000590275 GPR162Q16538 588 aa28.25■■■□□ 2.11
LRP3-202ENST00000590275 PNNQ9H307 717 aaKnown RBP28.25■■■□□ 2.11
LRP3-202ENST00000590275 WWC3Q9ULE0 1092 aa28.25■■■□□ 2.11
LRP3-202ENST00000590275 DCAF8L1A6NGE4 600 aa28.24■■■□□ 2.11
LRP3-202ENST00000590275 PELP1Q8IZL8 1130 aaKnown RBP28.24■■■□□ 2.11
LRP3-202ENST00000590275 TEX13AQ9BXU3 409 aaPredicted RBP28.24■■■□□ 2.11
LRP3-202ENST00000590275 C10orf71Q711Q0 1435 aa28.24■■■□□ 2.11
LRP3-202ENST00000590275 POLRMTO00411 1230 aaKnown RBP28.22■■■□□ 2.11
LRP3-202ENST00000590275 PXDNLA1KZ92 1463 aa28.21■■■□□ 2.11
LRP3-202ENST00000590275 ZPR1O75312 459 aa28.21■■■□□ 2.11
LRP3-202ENST00000590275 SNRPA1P09661 255 aaKnown RBP28.21■■■□□ 2.11
LRP3-202ENST00000590275 YY1P25490 414 aa28.21■■■□□ 2.11
LRP3-202ENST00000590275 WDR43Q15061 677 aaKnown RBP eCLIP28.21■■■□□ 2.11
LRP3-202ENST00000590275 KIAA1551Q9HCM1 1747 aa28.21■■■□□ 2.11
LRP3-202ENST00000590275 NBPF26B4DH59 902 aa28.2■■■□□ 2.1
LRP3-202ENST00000590275 EIF4A1P60842 406 aaKnown RBP28.2■■■□□ 2.1
LRP3-202ENST00000590275 NFIXQ14938 502 aa28.2■■■□□ 2.1
LRP3-202ENST00000590275 NBPF10Q6P3W6 841 aaKnown RBP28.2■■■□□ 2.1
LRP3-202ENST00000590275 NBPF15Q8N660 670 aa28.2■■■□□ 2.1
LRP3-202ENST00000590275 RUNDC1Q96C34 613 aa28.2■■■□□ 2.1
LRP3-202ENST00000590275 TRIM35Q9UPQ4 493 aa28.2■■■□□ 2.1
LRP3-202ENST00000590275 TBC1D2BQ9UPU7 963 aa28.2■■■□□ 2.1
LRP3-202ENST00000590275 PARP3Q9Y6F1 533 aa28.2■■■□□ 2.1
LRP3-202ENST00000590275 IL6STP40189 918 aaPredicted RBP28.19■■■□□ 2.1
LRP3-202ENST00000590275 NEUROD2Q15784 382 aa28.19■■■□□ 2.1
LRP3-202ENST00000590275 KDM3BQ7LBC6 1761 aa28.19■■■□□ 2.1
LRP3-202ENST00000590275 ZNF330Q9Y3S2 320 aaPredicted RBP28.18■■■□□ 2.1
LRP3-202ENST00000590275 KIF13BQ9NQT8 1826 aa28.16■■■□□ 2.1
LRP3-202ENST00000590275 A0A0G2JLW4 131 aa28.16■■■□□ 2.1
LRP3-202ENST00000590275 GIGYF1O75420 1035 aaPredicted RBP28.16■■■□□ 2.1
LRP3-202ENST00000590275 KCNA3P22001 575 aa28.15■■■□□ 2.1
LRP3-202ENST00000590275 PNISRQ8TF01 805 aaKnown RBP28.15■■■□□ 2.1
LRP3-202ENST00000590275 CAMTA2O94983 1202 aa28.14■■■□□ 2.1
LRP3-202ENST00000590275 DPEP1P16444 411 aa28.14■■■□□ 2.1
LRP3-202ENST00000590275 TBC1D9BQ66K14 1250 aa28.14■■■□□ 2.1
LRP3-202ENST00000590275 A0A087WZG4 1122 aa28.12■■■□□ 2.09
LRP3-202ENST00000590275 TGFB2P61812 414 aa28.11■■■□□ 2.09
LRP3-202ENST00000590275 BICDL1Q6ZP65 573 aa28.11■■■□□ 2.09
LRP3-202ENST00000590275 TSPYL4Q9UJ04 414 aa28.11■■■□□ 2.09
LRP3-202ENST00000590275 SCN7AQ01118 1682 aa28.1■■■□□ 2.09
LRP3-202ENST00000590275 N4BP2Q86UW6 1770 aaPredicted RBP28.09■■■□□ 2.09
LRP3-202ENST00000590275 SERPINB2P05120 415 aa28.09■■■□□ 2.09
LRP3-202ENST00000590275 DZIP3Q86Y13 1208 aaKnown RBP28.09■■■□□ 2.09
LRP3-202ENST00000590275 CARMIL3Q8ND23 1372 aa28.09■■■□□ 2.09
LRP3-202ENST00000590275 APAF1O14727 1248 aa28.08■■■□□ 2.09
LRP3-202ENST00000590275 CHRNA5P30532 468 aa28.08■■■□□ 2.09
LRP3-202ENST00000590275 KRT24Q2M2I5 525 aa28.08■■■□□ 2.09
LRP3-202ENST00000590275 NRXN2Q9P2S2 1712 aa28.07■■■□□ 2.08
LRP3-202ENST00000590275 LMOD3Q0VAK6 560 aa28.07■■■□□ 2.08
LRP3-202ENST00000590275 SENP3-EIF4A1A0A087X0R7 540 aa28.06■■■□□ 2.08
LRP3-202ENST00000590275 CHL1O00533 1208 aa28.06■■■□□ 2.08
LRP3-202ENST00000590275 GRIN3BO60391 1043 aa28.06■■■□□ 2.08
LRP3-202ENST00000590275 CCDC24Q8N4L8 307 aa28.05■■■□□ 2.08
LRP3-202ENST00000590275 AFDNP55196 1824 aaKnown RBP28.04■■■□□ 2.08
LRP3-202ENST00000590275 LAMB4A4D0S4 1761 aa28.04■■■□□ 2.08
LRP3-202ENST00000590275 LRP10Q7Z4F1 713 aa28.03■■■□□ 2.08
LRP3-202ENST00000590275 BABAM1Q9NWV8 329 aa28.03■■■□□ 2.08
LRP3-202ENST00000590275 BCORQ6W2J9 1755 aa28.02■■■□□ 2.08
LRP3-202ENST00000590275 PDIA6Q15084 440 aa28.02■■■□□ 2.08
LRP3-202ENST00000590275 HLFQ16534 295 aa28.02■■■□□ 2.08
LRP3-202ENST00000590275 ZNF784Q8NCA9 323 aaPredicted RBP28.02■■■□□ 2.08
LRP3-202ENST00000590275 TTLL7Q6ZT98 887 aa28.01■■■□□ 2.07
LRP3-202ENST00000590275 NGEFQ8N5V2 710 aa28.01■■■□□ 2.07
LRP3-202ENST00000590275 BCS1LQ9Y276 419 aa28.01■■■□□ 2.07
LRP3-202ENST00000590275 LAS1LQ9Y4W2 734 aaKnown RBP28.01■■■□□ 2.07
LRP3-202ENST00000590275 ANP32CO43423 234 aa28■■■□□ 2.07
LRP3-202ENST00000590275 PROSER3Q2NL68 480 aa28■■■□□ 2.07
LRP3-202ENST00000590275 PRR5LQ6MZQ0 368 aa28■■■□□ 2.07
LRP3-202ENST00000590275 MYL6BP14649 208 aa27.99■■■□□ 2.07
LRP3-202ENST00000590275 ANXA1P04083 346 aa27.98■■■□□ 2.07
LRP3-202ENST00000590275 BRCA1P38398 1863 aaKnown RBP27.98■■■□□ 2.07
LRP3-202ENST00000590275 ZNF853P0CG23 659 aa27.97■■■□□ 2.07
LRP3-202ENST00000590275 EIF2S2P20042 333 aaKnown RBP27.97■■■□□ 2.07
LRP3-202ENST00000590275 MRS2Q9HD23 443 aa27.97■■■□□ 2.07
LRP3-202ENST00000590275 CHD4Q14839 1912 aa27.96■■■□□ 2.07
LRP3-202ENST00000590275 CLEC4GQ6UXB4 293 aa27.96■■■□□ 2.07
LRP3-202ENST00000590275 NPM2Q86SE8 214 aaKnown RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms