RNA–Protein interactions for RNA: ENST00000590062.1

GPATCH1-202, Transcript of G-patch domain containing 1, humanhuman

TSL 2

Gene GPATCH1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-202ENST00000590062 SOS1Q07889 1333 aaPredicted RBP15.85■□□□□ 0.13
GPATCH1-202ENST00000590062 ZBED9Q6R2W3 1325 aa15.85■□□□□ 0.13
GPATCH1-202ENST00000590062 MYH14Q7Z406 1995 aaKnown RBP15.84■□□□□ 0.13
GPATCH1-202ENST00000590062 E9PSI1 815 aa15.84■□□□□ 0.13
GPATCH1-202ENST00000590062 STARD3NLO95772 234 aa15.84■□□□□ 0.13
GPATCH1-202ENST00000590062 FLAD1Q8NFF5 587 aa15.84■□□□□ 0.13
GPATCH1-202ENST00000590062 MYH16Q9H6N6 1097 aa15.84■□□□□ 0.13
GPATCH1-202ENST00000590062 CASZ1Q86V15 1759 aa15.84■□□□□ 0.13
GPATCH1-202ENST00000590062 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
GPATCH1-202ENST00000590062 PRAMEF22A3QJZ6 481 aa15.83■□□□□ 0.12
GPATCH1-202ENST00000590062 GNPATO15228 680 aa15.83■□□□□ 0.12
GPATCH1-202ENST00000590062 CRKLP46109 303 aaKnown RBP15.83■□□□□ 0.12
GPATCH1-202ENST00000590062 INTS5Q6P9B9 1019 aaKnown RBP15.83■□□□□ 0.12
GPATCH1-202ENST00000590062 TSR2Q969E8 191 aaKnown RBP15.83■□□□□ 0.12
GPATCH1-202ENST00000590062 SSFA2P28290 1259 aa15.82■□□□□ 0.12
GPATCH1-202ENST00000590062 SLFN5Q08AF3 891 aa15.82■□□□□ 0.12
GPATCH1-202ENST00000590062 KRT24Q2M2I5 525 aa15.82■□□□□ 0.12
GPATCH1-202ENST00000590062 TRMT2AQ8IZ69 625 aaKnown RBP15.82■□□□□ 0.12
GPATCH1-202ENST00000590062 CCDC87Q9NVE4 849 aa15.82■□□□□ 0.12
GPATCH1-202ENST00000590062 RTCBQ9Y3I0 505 aaKnown RBP15.82■□□□□ 0.12
GPATCH1-202ENST00000590062 USP16Q9Y5T5 823 aa15.82■□□□□ 0.12
GPATCH1-202ENST00000590062 ERBB4Q15303 1308 aa15.81■□□□□ 0.12
GPATCH1-202ENST00000590062 DUSP27Q5VZP5 1158 aa15.81■□□□□ 0.12
GPATCH1-202ENST00000590062 PNPLA7Q6ZV29 1317 aa15.81■□□□□ 0.12
GPATCH1-202ENST00000590062 MSH5O43196 834 aa15.8■□□□□ 0.12
GPATCH1-202ENST00000590062 RPS6KA4O75676 772 aa15.8■□□□□ 0.12
GPATCH1-202ENST00000590062 PHF14O94880 888 aa15.8■□□□□ 0.12
GPATCH1-202ENST00000590062 ADRA2BP18089 450 aa15.8■□□□□ 0.12
GPATCH1-202ENST00000590062 C8orf58Q8NAV2 365 aa15.8■□□□□ 0.12
GPATCH1-202ENST00000590062 ZBTB1Q9Y2K1 713 aa15.8■□□□□ 0.12
GPATCH1-202ENST00000590062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.79■□□□□ 0.12
GPATCH1-202ENST00000590062 AMIGO3Q86WK7 504 aa15.79■□□□□ 0.12
GPATCH1-202ENST00000590062 CDCA7LQ96GN5 454 aa15.79■□□□□ 0.12
GPATCH1-202ENST00000590062 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
GPATCH1-202ENST00000590062 NPM2Q86SE8 214 aaKnown RBP15.78■□□□□ 0.12
GPATCH1-202ENST00000590062 SLC16A10Q8TF71 515 aa15.78■□□□□ 0.12
GPATCH1-202ENST00000590062 NBPF26B4DH59 902 aa15.77■□□□□ 0.12
GPATCH1-202ENST00000590062 A1BGP04217 495 aa15.77■□□□□ 0.12
GPATCH1-202ENST00000590062 EIF5P55010 431 aaKnown RBP15.77■□□□□ 0.12
GPATCH1-202ENST00000590062 TRAPPC3LQ5T215 181 aa15.77■□□□□ 0.12
GPATCH1-202ENST00000590062 NBPF10Q6P3W6 841 aaKnown RBP15.77■□□□□ 0.12
GPATCH1-202ENST00000590062 NBPF15Q8N660 670 aa15.77■□□□□ 0.12
GPATCH1-202ENST00000590062 TSPYL6Q8N831 410 aa15.77■□□□□ 0.12
GPATCH1-202ENST00000590062 CHMP4AQ9BY43 222 aa15.77■□□□□ 0.12
GPATCH1-202ENST00000590062 C4AP0C0L4 1744 aa15.77■□□□□ 0.11
GPATCH1-202ENST00000590062 LRP5O75197 1615 aa15.76■□□□□ 0.11
GPATCH1-202ENST00000590062 EXOSC9Q06265 439 aaKnown RBP15.76■□□□□ 0.11
GPATCH1-202ENST00000590062 PDIA6Q15084 440 aa15.76■□□□□ 0.11
GPATCH1-202ENST00000590062 TWISTNBQ3B726 338 aaPredicted RBP15.76■□□□□ 0.11
GPATCH1-202ENST00000590062 HDGFL1Q5TGJ6 251 aa15.76■□□□□ 0.11
GPATCH1-202ENST00000590062 LRP10Q7Z4F1 713 aa15.76■□□□□ 0.11
GPATCH1-202ENST00000590062 COL23A1Q86Y22 540 aaPredicted RBP15.76■□□□□ 0.11
GPATCH1-202ENST00000590062 MTFR1LQ9H019 292 aa15.76■□□□□ 0.11
GPATCH1-202ENST00000590062 COL15A1P39059 1388 aa15.75■□□□□ 0.11
GPATCH1-202ENST00000590062 CANXP27824 592 aaKnown RBP15.75■□□□□ 0.11
GPATCH1-202ENST00000590062 RFC4P35249 363 aa15.75■□□□□ 0.11
GPATCH1-202ENST00000590062 PDGFDQ9GZP0 370 aaPredicted RBP15.75■□□□□ 0.11
GPATCH1-202ENST00000590062 SPON1Q9HCB6 807 aa15.75■□□□□ 0.11
GPATCH1-202ENST00000590062 ELL2O00472 640 aaPredicted RBP15.74■□□□□ 0.11
GPATCH1-202ENST00000590062 VAMP4O75379 141 aa15.74■□□□□ 0.11
GPATCH1-202ENST00000590062 ZBTB7AO95365 584 aa15.74■□□□□ 0.11
GPATCH1-202ENST00000590062 EIF2S2P20042 333 aaKnown RBP15.74■□□□□ 0.11
GPATCH1-202ENST00000590062 ZNF330Q9Y3S2 320 aaPredicted RBP15.74■□□□□ 0.11
GPATCH1-202ENST00000590062 A0A087WZG4 1122 aa15.73■□□□□ 0.11
GPATCH1-202ENST00000590062 CT47B1P0C2W7 299 aaPredicted RBP15.73■□□□□ 0.11
GPATCH1-202ENST00000590062 CCDC30Q5VVM6 783 aa15.73■□□□□ 0.11
GPATCH1-202ENST00000590062 ARHGEF1Q92888 912 aaKnown RBP15.73■□□□□ 0.11
GPATCH1-202ENST00000590062 DDX21Q9NR30 783 aaKnown RBP eCLIP15.73■□□□□ 0.11
GPATCH1-202ENST00000590062 DBF4Q9UBU7 674 aaPredicted RBP15.73■□□□□ 0.11
GPATCH1-202ENST00000590062 SCN7AQ01118 1682 aa15.73■□□□□ 0.11
GPATCH1-202ENST00000590062 USP42Q9H9J4 1324 aaKnown RBP15.72■□□□□ 0.11
GPATCH1-202ENST00000590062 COL24A1Q17RW2 1714 aa15.72■□□□□ 0.11
GPATCH1-202ENST00000590062 RGL2O15211 777 aa15.72■□□□□ 0.11
GPATCH1-202ENST00000590062 PROSER3Q2NL68 480 aa15.72■□□□□ 0.11
GPATCH1-202ENST00000590062 SMIM5Q71RC9 77 aa15.72■□□□□ 0.11
GPATCH1-202ENST00000590062 ZNF428Q96B54 188 aa15.72■□□□□ 0.11
GPATCH1-202ENST00000590062 CHPF2Q9P2E5 772 aa15.72■□□□□ 0.11
GPATCH1-202ENST00000590062 ZPR1O75312 459 aa15.71■□□□□ 0.11
GPATCH1-202ENST00000590062 POLD1P28340 1107 aa15.71■□□□□ 0.11
GPATCH1-202ENST00000590062 PIP4K2AP48426 406 aaPredicted RBP15.71■□□□□ 0.11
GPATCH1-202ENST00000590062 NARFQ9UHQ1 456 aa15.71■□□□□ 0.11
GPATCH1-202ENST00000590062 BCORQ6W2J9 1755 aa15.71■□□□□ 0.11
GPATCH1-202ENST00000590062 NECTIN2Q92692 538 aa15.7■□□□□ 0.1
GPATCH1-202ENST00000590062 HYPKQ9NX55 129 aa15.7■□□□□ 0.1
GPATCH1-202ENST00000590062 ATF5Q9Y2D1 282 aaPredicted RBP15.7■□□□□ 0.1
GPATCH1-202ENST00000590062 MSL1Q68DK7 614 aa15.69■□□□□ 0.1
GPATCH1-202ENST00000590062 ARXQ96QS3 562 aa15.69■□□□□ 0.1
GPATCH1-202ENST00000590062 PPP1R1BQ9UD71 204 aaPredicted RBP15.69■□□□□ 0.1
GPATCH1-202ENST00000590062 CACNA1FO60840 1977 aa15.69■□□□□ 0.1
GPATCH1-202ENST00000590062 CAMTA2O94983 1202 aa15.68■□□□□ 0.1
GPATCH1-202ENST00000590062 MYL6BP14649 208 aa15.68■□□□□ 0.1
GPATCH1-202ENST00000590062 DZIP3Q86Y13 1208 aaKnown RBP15.68■□□□□ 0.1
GPATCH1-202ENST00000590062 NLGN1Q8N2Q7 840 aa15.68■□□□□ 0.1
GPATCH1-202ENST00000590062 STK31Q9BXU1 1019 aa15.68■□□□□ 0.1
GPATCH1-202ENST00000590062 ANXA1P04083 346 aa15.67■□□□□ 0.1
GPATCH1-202ENST00000590062 GYS1P13807 737 aa15.67■□□□□ 0.1
GPATCH1-202ENST00000590062 BCL2L12Q9HB09 334 aa15.67■□□□□ 0.1
GPATCH1-202ENST00000590062 SRP68Q9UHB9 627 aaKnown RBP15.67■□□□□ 0.1
GPATCH1-202ENST00000590062 MAP3K15Q6ZN16 1313 aa15.67■□□□□ 0.1
GPATCH1-202ENST00000590062 ERVV-1B6SEH8 477 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms