RNA–Protein interactions for RNA: ENST00000589925.1

SAFB2-204, Transcript of scaffold attachment factor B2, humanhuman

TSL 3

Gene SAFB2, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-204ENST00000589925 RUNDC1Q96C34 613 aa22.16■■□□□ 1.14
SAFB2-204ENST00000589925 TEX13AQ9BXU3 409 aaPredicted RBP22.16■■□□□ 1.14
SAFB2-204ENST00000589925 GYS1P13807 737 aa22.15■■□□□ 1.14
SAFB2-204ENST00000589925 USP42Q9H9J4 1324 aaKnown RBP22.14■■□□□ 1.14
SAFB2-204ENST00000589925 CCDC184Q52MB2 194 aa22.14■■□□□ 1.13
SAFB2-204ENST00000589925 MIS18AQ9NYP9 233 aa22.14■■□□□ 1.13
SAFB2-204ENST00000589925 ANP32CO43423 234 aa22.13■■□□□ 1.13
SAFB2-204ENST00000589925 NLGN1Q8N2Q7 840 aa22.13■■□□□ 1.13
SAFB2-204ENST00000589925 COL15A1P39059 1388 aa22.12■■□□□ 1.13
SAFB2-204ENST00000589925 KLHL34Q8N239 644 aa22.12■■□□□ 1.13
SAFB2-204ENST00000589925 PNISRQ8TF01 805 aaKnown RBP22.12■■□□□ 1.13
SAFB2-204ENST00000589925 SRP68Q9UHB9 627 aaKnown RBP22.12■■□□□ 1.13
SAFB2-204ENST00000589925 RRP7AQ9Y3A4 280 aaKnown RBP22.12■■□□□ 1.13
SAFB2-204ENST00000589925 PRAMEF22A3QJZ6 481 aa22.11■■□□□ 1.13
SAFB2-204ENST00000589925 MMP10P09238 476 aa22.11■■□□□ 1.13
SAFB2-204ENST00000589925 LMOD3Q0VAK6 560 aa22.11■■□□□ 1.13
SAFB2-204ENST00000589925 KDM3BQ7LBC6 1761 aa22.1■■□□□ 1.13
SAFB2-204ENST00000589925 SNRPA1P09661 255 aaKnown RBP22.1■■□□□ 1.13
SAFB2-204ENST00000589925 CANXP27824 592 aaKnown RBP22.1■■□□□ 1.13
SAFB2-204ENST00000589925 NLGN2Q8NFZ4 835 aa22.1■■□□□ 1.13
SAFB2-204ENST00000589925 EIF5P55010 431 aaKnown RBP22.09■■□□□ 1.13
SAFB2-204ENST00000589925 NEUROD2Q15784 382 aa22.09■■□□□ 1.13
SAFB2-204ENST00000589925 CD2APQ9Y5K6 639 aa22.09■■□□□ 1.13
SAFB2-204ENST00000589925 USP16Q9Y5T5 823 aa22.09■■□□□ 1.13
SAFB2-204ENST00000589925 FKBP8Q14318 412 aa22.08■■□□□ 1.13
SAFB2-204ENST00000589925 TRIM35Q9UPQ4 493 aa22.08■■□□□ 1.13
SAFB2-204ENST00000589925 ZPR1O75312 459 aa22.07■■□□□ 1.12
SAFB2-204ENST00000589925 A1BGP04217 495 aa22.07■■□□□ 1.12
SAFB2-204ENST00000589925 USPL1Q5W0Q7 1092 aa22.07■■□□□ 1.12
SAFB2-204ENST00000589925 NARFQ9UHQ1 456 aa22.07■■□□□ 1.12
SAFB2-204ENST00000589925 IL6STP40189 918 aaPredicted RBP22.06■■□□□ 1.12
SAFB2-204ENST00000589925 EIF4A1P60842 406 aaKnown RBP22.06■■□□□ 1.12
SAFB2-204ENST00000589925 BABAM1Q9NWV8 329 aa22.05■■□□□ 1.12
SAFB2-204ENST00000589925 DCAF8L1A6NGE4 600 aa22.04■■□□□ 1.12
SAFB2-204ENST00000589925 GIGYF1O75420 1035 aaPredicted RBP22.04■■□□□ 1.12
SAFB2-204ENST00000589925 TSPYL4Q9UJ04 414 aa22.04■■□□□ 1.12
SAFB2-204ENST00000589925 A0A087WZG4 1122 aa22.03■■□□□ 1.12
SAFB2-204ENST00000589925 BCL2L12Q9HB09 334 aa22.03■■□□□ 1.12
SAFB2-204ENST00000589925 MRS2Q9HD23 443 aa22.03■■□□□ 1.12
SAFB2-204ENST00000589925 APAF1O14727 1248 aa22.02■■□□□ 1.12
SAFB2-204ENST00000589925 TM4SF1P30408 202 aa22.02■■□□□ 1.12
SAFB2-204ENST00000589925 PIP4K2AP48426 406 aaPredicted RBP22.02■■□□□ 1.12
SAFB2-204ENST00000589925 DDR1Q08345 913 aa22.02■■□□□ 1.12
SAFB2-204ENST00000589925 PARP3Q9Y6F1 533 aa22.02■■□□□ 1.12
SAFB2-204ENST00000589925 C10orf71Q711Q0 1435 aa22.02■■□□□ 1.12
SAFB2-204ENST00000589925 ZNF330Q9Y3S2 320 aaPredicted RBP22.01■■□□□ 1.11
SAFB2-204ENST00000589925 LAMB4A4D0S4 1761 aa22.01■■□□□ 1.11
SAFB2-204ENST00000589925 NBPF26B4DH59 902 aa22■■□□□ 1.11
SAFB2-204ENST00000589925 POLRMTO00411 1230 aaKnown RBP22■■□□□ 1.11
SAFB2-204ENST00000589925 NBPF10Q6P3W6 841 aaKnown RBP22■■□□□ 1.11
SAFB2-204ENST00000589925 NBPF15Q8N660 670 aa22■■□□□ 1.11
SAFB2-204ENST00000589925 TBC1D2BQ9UPU7 963 aa22■■□□□ 1.11
SAFB2-204ENST00000589925 SCN7AQ01118 1682 aa22■■□□□ 1.11
SAFB2-204ENST00000589925 CHL1O00533 1208 aa21.99■■□□□ 1.11
SAFB2-204ENST00000589925 NFIXQ14938 502 aa21.99■■□□□ 1.11
SAFB2-204ENST00000589925 KIF13BQ9NQT8 1826 aa21.97■■□□□ 1.11
SAFB2-204ENST00000589925 CAMTA2O94983 1202 aa21.97■■□□□ 1.11
SAFB2-204ENST00000589925 GPR162Q16538 588 aa21.97■■□□□ 1.11
SAFB2-204ENST00000589925 NPM2Q86SE8 214 aaKnown RBP21.97■■□□□ 1.11
SAFB2-204ENST00000589925 PXDNLA1KZ92 1463 aa21.96■■□□□ 1.11
SAFB2-204ENST00000589925 DZIP3Q86Y13 1208 aaKnown RBP21.96■■□□□ 1.11
SAFB2-204ENST00000589925 YBX3P16989 372 aaKnown RBP eCLIP21.95■■□□□ 1.1
SAFB2-204ENST00000589925 CFAP44Q96MT7 982 aa21.95■■□□□ 1.1
SAFB2-204ENST00000589925 KIAA1551Q9HCM1 1747 aa21.94■■□□□ 1.1
SAFB2-204ENST00000589925 TGFB2P61812 414 aa21.94■■□□□ 1.1
SAFB2-204ENST00000589925 TBC1D9BQ66K14 1250 aa21.94■■□□□ 1.1
SAFB2-204ENST00000589925 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
SAFB2-204ENST00000589925 LAS1LQ9Y4W2 734 aaKnown RBP21.94■■□□□ 1.1
SAFB2-204ENST00000589925 ZNF853P0CG23 659 aa21.93■■□□□ 1.1
SAFB2-204ENST00000589925 BCORQ6W2J9 1755 aa21.93■■□□□ 1.1
SAFB2-204ENST00000589925 NRXN2Q9P2S2 1712 aa21.92■■□□□ 1.1
SAFB2-204ENST00000589925 ERBB4Q15303 1308 aa21.91■■□□□ 1.1
SAFB2-204ENST00000589925 SERPINB2P05120 415 aa21.91■■□□□ 1.1
SAFB2-204ENST00000589925 CALD1Q05682 793 aaKnown RBP21.91■■□□□ 1.1
SAFB2-204ENST00000589925 KRT24Q2M2I5 525 aa21.91■■□□□ 1.1
SAFB2-204ENST00000589925 BICDL1Q6ZP65 573 aa21.91■■□□□ 1.1
SAFB2-204ENST00000589925 IFT57Q9NWB7 429 aa21.91■■□□□ 1.1
SAFB2-204ENST00000589925 CARMIL3Q8ND23 1372 aa21.9■■□□□ 1.1
SAFB2-204ENST00000589925 A0A0G2JLW4 131 aa21.9■■□□□ 1.1
SAFB2-204ENST00000589925 RGL2O15211 777 aa21.9■■□□□ 1.1
SAFB2-204ENST00000589925 CCDC27Q2M243 656 aa21.9■■□□□ 1.1
SAFB2-204ENST00000589925 CLEC4GQ6UXB4 293 aa21.9■■□□□ 1.1
SAFB2-204ENST00000589925 MBIPQ9NS73 344 aa21.9■■□□□ 1.1
SAFB2-204ENST00000589925 LRP10Q7Z4F1 713 aa21.89■■□□□ 1.09
SAFB2-204ENST00000589925 GRIN3BO60391 1043 aa21.88■■□□□ 1.09
SAFB2-204ENST00000589925 MYL6BP14649 208 aa21.88■■□□□ 1.09
SAFB2-204ENST00000589925 DPEP1P16444 411 aa21.88■■□□□ 1.09
SAFB2-204ENST00000589925 EIF2S2P20042 333 aaKnown RBP21.88■■□□□ 1.09
SAFB2-204ENST00000589925 KCNA3P22001 575 aa21.88■■□□□ 1.09
SAFB2-204ENST00000589925 PDIA6Q15084 440 aa21.88■■□□□ 1.09
SAFB2-204ENST00000589925 NCBP3Q53F19 620 aaKnown RBP21.88■■□□□ 1.09
SAFB2-204ENST00000589925 WWC3Q9ULE0 1092 aa21.88■■□□□ 1.09
SAFB2-204ENST00000589925 ZNF652Q9Y2D9 606 aa21.88■■□□□ 1.09
SAFB2-204ENST00000589925 SENP3-EIF4A1A0A087X0R7 540 aa21.87■■□□□ 1.09
SAFB2-204ENST00000589925 GNAI1P63096 354 aa21.87■■□□□ 1.09
SAFB2-204ENST00000589925 SETDB2Q96T68 719 aa21.87■■□□□ 1.09
SAFB2-204ENST00000589925 AFDNP55196 1824 aaKnown RBP21.87■■□□□ 1.09
SAFB2-204ENST00000589925 N4BP2Q86UW6 1770 aaPredicted RBP21.87■■□□□ 1.09
SAFB2-204ENST00000589925 HOXB7P09629 217 aa21.86■■□□□ 1.09
SAFB2-204ENST00000589925 YY1P25490 414 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms