RNA–Protein interactions for RNA: ENST00000589799.5

ZNF235-204, Transcript of zinc finger protein 235, humanhuman

TSL 1 (best) BASIC

Gene ZNF235, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF235-204ENST00000589799 PIK3C2GO75747 1445 aa9.47□□□□□ -0.89
ZNF235-204ENST00000589799 NRKQ7Z2Y5 1582 aa9.46□□□□□ -0.89
ZNF235-204ENST00000589799 KCNQ2O43526 872 aa9.46□□□□□ -0.9
ZNF235-204ENST00000589799 PSEN2P49810 448 aa9.46□□□□□ -0.9
ZNF235-204ENST00000589799 SAFB2Q14151 953 aaKnown RBP eCLIP9.46□□□□□ -0.9
ZNF235-204ENST00000589799 RTL5Q5HYW3 569 aaPredicted RBP9.46□□□□□ -0.9
ZNF235-204ENST00000589799 SWT1Q5T5J6 900 aaKnown RBP9.46□□□□□ -0.9
ZNF235-204ENST00000589799 SPATA31A1Q5TZJ5 1347 aa9.46□□□□□ -0.9
ZNF235-204ENST00000589799 CHD4Q14839 1912 aa9.46□□□□□ -0.9
ZNF235-204ENST00000589799 GPRASP1Q5JY77 1395 aa9.46□□□□□ -0.9
ZNF235-204ENST00000589799 ANKRD30BQ9BXX2 1392 aa9.46□□□□□ -0.9
ZNF235-204ENST00000589799 ANKARQ7Z5J8 1434 aa9.46□□□□□ -0.9
ZNF235-204ENST00000589799 PHRF1Q9P1Y6 1649 aaKnown RBP9.45□□□□□ -0.9
ZNF235-204ENST00000589799 ARHGAP33O14559 1287 aa9.45□□□□□ -0.9
ZNF235-204ENST00000589799 USP17L8P0C7I0 530 aa9.45□□□□□ -0.9
ZNF235-204ENST00000589799 ABL2P42684 1182 aa9.45□□□□□ -0.9
ZNF235-204ENST00000589799 RGL3Q3MIN7 710 aa9.45□□□□□ -0.9
ZNF235-204ENST00000589799 STRN4Q9NRL3 753 aa9.45□□□□□ -0.9
ZNF235-204ENST00000589799 PODXL2Q9NZ53 605 aa9.45□□□□□ -0.9
ZNF235-204ENST00000589799 SEPT9Q9UHD8 586 aaPredicted RBP9.45□□□□□ -0.9
ZNF235-204ENST00000589799 ERBB3P21860 1342 aa9.45□□□□□ -0.9
ZNF235-204ENST00000589799 MYOM1P52179 1685 aa9.45□□□□□ -0.9
ZNF235-204ENST00000589799 PDIA4P13667 645 aaKnown RBP9.44□□□□□ -0.9
ZNF235-204ENST00000589799 PDE3BQ13370 1112 aa9.44□□□□□ -0.9
ZNF235-204ENST00000589799 GRIPAP1Q4V328 841 aa9.44□□□□□ -0.9
ZNF235-204ENST00000589799 IFFO2Q5TF58 517 aa9.44□□□□□ -0.9
ZNF235-204ENST00000589799 ZNF784Q8NCA9 323 aaPredicted RBP9.44□□□□□ -0.9
ZNF235-204ENST00000589799 USP35Q9P2H5 1018 aa9.44□□□□□ -0.9
ZNF235-204ENST00000589799 RGPD3A6NKT7 1758 aaPredicted RBP9.44□□□□□ -0.9
ZNF235-204ENST00000589799 RGPD4Q7Z3J3 1758 aa9.44□□□□□ -0.9
ZNF235-204ENST00000589799 CASZ1Q86V15 1759 aa9.44□□□□□ -0.9
ZNF235-204ENST00000589799 VARS2Q5ST30 1063 aaKnown RBP9.43□□□□□ -0.9
ZNF235-204ENST00000589799 SLF2Q8IX21 1173 aa9.43□□□□□ -0.9
ZNF235-204ENST00000589799 PRAM1Q96QH2 718 aa9.43□□□□□ -0.9
ZNF235-204ENST00000589799 ITSN1Q15811 1721 aa9.42□□□□□ -0.9
ZNF235-204ENST00000589799 SPATA31E1Q6ZUB1 1445 aa9.42□□□□□ -0.9
ZNF235-204ENST00000589799 DHX57Q6P158 1386 aaKnown RBP9.42□□□□□ -0.9
ZNF235-204ENST00000589799 KIAA0232Q92628 1395 aa9.42□□□□□ -0.9
ZNF235-204ENST00000589799 ACIN1Q9UKV3 1341 aaKnown RBP9.42□□□□□ -0.9
ZNF235-204ENST00000589799 SLC10A3P09131 477 aa9.42□□□□□ -0.9
ZNF235-204ENST00000589799 CHRNA2Q15822 529 aa9.42□□□□□ -0.9
ZNF235-204ENST00000589799 HELBQ8NG08 1087 aaPredicted RBP9.42□□□□□ -0.9
ZNF235-204ENST00000589799 SLC4A5Q9BY07 1137 aa9.42□□□□□ -0.9
ZNF235-204ENST00000589799 POGKQ9P215 609 aa9.42□□□□□ -0.9
ZNF235-204ENST00000589799 EIF3AQ14152 1382 aaKnown RBP9.41□□□□□ -0.9
ZNF235-204ENST00000589799 RNF40O75150 1001 aa9.41□□□□□ -0.9
ZNF235-204ENST00000589799 TSC1Q92574 1164 aa9.41□□□□□ -0.9
ZNF235-204ENST00000589799 SIRT1Q96EB6 747 aa9.41□□□□□ -0.9
ZNF235-204ENST00000589799 TBC1D2BQ9UPU7 963 aa9.41□□□□□ -0.9
ZNF235-204ENST00000589799 PARP4Q9UKK3 1724 aaKnown RBP9.41□□□□□ -0.9
ZNF235-204ENST00000589799 DLC1Q96QB1 1528 aa9.41□□□□□ -0.9
ZNF235-204ENST00000589799 TULP4Q9NRJ4 1543 aa9.41□□□□□ -0.9
ZNF235-204ENST00000589799 PBX2P40425 430 aa9.4□□□□□ -0.9
ZNF235-204ENST00000589799 EVA1CP58658 441 aa9.4□□□□□ -0.9
ZNF235-204ENST00000589799 C1QTNF8P60827 252 aa9.4□□□□□ -0.9
ZNF235-204ENST00000589799 MTMR2Q13614 643 aa9.4□□□□□ -0.9
ZNF235-204ENST00000589799 PPARGC1BQ86YN6 1023 aaKnown RBP9.4□□□□□ -0.9
ZNF235-204ENST00000589799 NBPF3Q9H094 633 aa9.4□□□□□ -0.9
ZNF235-204ENST00000589799 NDUFB9Q9Y6M9 179 aa9.4□□□□□ -0.9
ZNF235-204ENST00000589799 SBF2Q86WG5 1849 aa9.4□□□□□ -0.91
ZNF235-204ENST00000589799 SSH2Q76I76 1423 aa9.39□□□□□ -0.91
ZNF235-204ENST00000589799 GUCA2AQ02747 115 aa9.39□□□□□ -0.91
ZNF235-204ENST00000589799 NGDNQ8NEJ9 315 aaKnown RBP9.39□□□□□ -0.91
ZNF235-204ENST00000589799 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
ZNF235-204ENST00000589799 HIRIP3Q9BW71 556 aaPredicted RBP9.39□□□□□ -0.91
ZNF235-204ENST00000589799 C6orf229H3BNL8 230 aa9.38□□□□□ -0.91
ZNF235-204ENST00000589799 ZBTB7AO95365 584 aa9.38□□□□□ -0.91
ZNF235-204ENST00000589799 CFHP08603 1231 aa9.38□□□□□ -0.91
ZNF235-204ENST00000589799 ZC3H6P61129 1189 aaKnown RBP9.38□□□□□ -0.91
ZNF235-204ENST00000589799 HLA-CQ95604 372 aa9.38□□□□□ -0.91
ZNF235-204ENST00000589799 PCDHGC3Q9UN70 934 aa9.38□□□□□ -0.91
ZNF235-204ENST00000589799 AXIN2Q9Y2T1 843 aa9.38□□□□□ -0.91
ZNF235-204ENST00000589799 ATP7BP35670 1465 aa9.38□□□□□ -0.91
ZNF235-204ENST00000589799 OVOS2A0A0G2JMS6 1433 aa9.38□□□□□ -0.91
ZNF235-204ENST00000589799 OVOS2A0A0J9YW53 1432 aa9.38□□□□□ -0.91
ZNF235-204ENST00000589799 OVOS2Q6IE36 1432 aa9.38□□□□□ -0.91
ZNF235-204ENST00000589799 LRRC37A3O60309 1634 aa9.38□□□□□ -0.91
ZNF235-204ENST00000589799 AKAP12Q02952 1782 aa9.37□□□□□ -0.91
ZNF235-204ENST00000589799 PRR36Q9H6K5 1346 aa9.37□□□□□ -0.91
ZNF235-204ENST00000589799 PEAK1Q9H792 1746 aa9.37□□□□□ -0.91
ZNF235-204ENST00000589799 POTEMA6NI47 508 aa9.37□□□□□ -0.91
ZNF235-204ENST00000589799 FUT2Q10981 343 aa9.37□□□□□ -0.91
ZNF235-204ENST00000589799 TRIM26Q12899 539 aaPredicted RBP9.37□□□□□ -0.91
ZNF235-204ENST00000589799 CFAP70Q5T0N1 1121 aa9.37□□□□□ -0.91
ZNF235-204ENST00000589799 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
ZNF235-204ENST00000589799 SAMD7Q7Z3H4 446 aa9.37□□□□□ -0.91
ZNF235-204ENST00000589799 LAPTM4BQ86VI4 370 aa9.37□□□□□ -0.91
ZNF235-204ENST00000589799 TCP11L2Q8N4U5 519 aa9.37□□□□□ -0.91
ZNF235-204ENST00000589799 C14orf93Q9H972 538 aaKnown RBP9.37□□□□□ -0.91
ZNF235-204ENST00000589799 LMO7Q8WWI1 1683 aa9.36□□□□□ -0.91
ZNF235-204ENST00000589799 C11orf95C9JLR9 678 aaPredicted RBP9.36□□□□□ -0.91
ZNF235-204ENST00000589799 EMP3P54852 163 aa9.36□□□□□ -0.91
ZNF235-204ENST00000589799 NUTM2GQ5VZR2 741 aa9.36□□□□□ -0.91
ZNF235-204ENST00000589799 LARP1Q6PKG0 1096 aaKnown RBP9.36□□□□□ -0.91
ZNF235-204ENST00000589799 NECTIN2Q92692 538 aa9.36□□□□□ -0.91
ZNF235-204ENST00000589799 FAM163AQ96GL9 167 aaPredicted RBP9.36□□□□□ -0.91
ZNF235-204ENST00000589799 VPS9D1Q9Y2B5 631 aa9.36□□□□□ -0.91
ZNF235-204ENST00000589799 WNK3Q9BYP7 1800 aa9.35□□□□□ -0.91
ZNF235-204ENST00000589799 GIGYF1O75420 1035 aaPredicted RBP9.35□□□□□ -0.91
ZNF235-204ENST00000589799 CTDSPL2Q05D32 466 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms