RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 IGHDP01880 384 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 CT47B1P0C2W7 299 aaPredicted RBP4.17□□□□□ -1.74
LINC01539-203ENST00000589447 MSNP26038 577 aaKnown RBP4.17□□□□□ -1.74
LINC01539-203ENST00000589447 TERF1P54274 439 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 PDIA6Q15084 440 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 RGL3Q3MIN7 710 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 POTEBQ6S5H4 581 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 GIGYF2Q6Y7W6 1299 aaKnown RBP4.17□□□□□ -1.74
LINC01539-203ENST00000589447 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.17□□□□□ -1.74
LINC01539-203ENST00000589447 MTERF4Q7Z6M4 381 aaKnown RBP4.17□□□□□ -1.74
LINC01539-203ENST00000589447 CCDC146Q8IYE0 955 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 C22orf23Q9BZE7 217 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 PDCL3Q9H2J4 239 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 PCDHGA4Q9Y5G9 962 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 SETBP1Q9Y6X0 1596 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 KIF16BQ96L93 1317 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 NOS1P29475 1434 aa4.16□□□□□ -1.74
LINC01539-203ENST00000589447 ARHGAP31Q2M1Z3 1444 aa4.16□□□□□ -1.74
LINC01539-203ENST00000589447 APAF1O14727 1248 aa4.16□□□□□ -1.74
LINC01539-203ENST00000589447 KIF3BO15066 747 aa4.16□□□□□ -1.74
LINC01539-203ENST00000589447 VAMP1P23763 118 aa4.16□□□□□ -1.74
LINC01539-203ENST00000589447 HIC1Q14526 733 aa4.16□□□□□ -1.74
LINC01539-203ENST00000589447 SF3A1Q15459 793 aaKnown RBP4.16□□□□□ -1.74
LINC01539-203ENST00000589447 WDR63Q8IWG1 891 aa4.16□□□□□ -1.74
LINC01539-203ENST00000589447 ZNF592Q92610 1267 aa4.16□□□□□ -1.74
LINC01539-203ENST00000589447 GLMNQ92990 594 aa4.16□□□□□ -1.74
LINC01539-203ENST00000589447 SNX21Q969T3 373 aa4.16□□□□□ -1.74
LINC01539-203ENST00000589447 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.16□□□□□ -1.74
LINC01539-203ENST00000589447 VRTNQ9H8Y1 702 aa4.16□□□□□ -1.74
LINC01539-203ENST00000589447 PDZRN3Q9UPQ7 1066 aa4.16□□□□□ -1.74
LINC01539-203ENST00000589447 NEXMIFQ5QGS0 1516 aa4.16□□□□□ -1.74
LINC01539-203ENST00000589447 SBNO2Q9Y2G9 1366 aa4.15□□□□□ -1.74
LINC01539-203ENST00000589447 CRYBG1Q9Y4K1 1723 aa4.15□□□□□ -1.74
LINC01539-203ENST00000589447 HSP90AB1P08238 724 aaKnown RBP4.15□□□□□ -1.75
LINC01539-203ENST00000589447 LTKP29376 864 aa4.15□□□□□ -1.75
LINC01539-203ENST00000589447 ZC3H6P61129 1189 aaKnown RBP4.15□□□□□ -1.75
LINC01539-203ENST00000589447 PIP4K2BP78356 416 aa4.15□□□□□ -1.75
LINC01539-203ENST00000589447 CALD1Q05682 793 aaKnown RBP4.15□□□□□ -1.75
LINC01539-203ENST00000589447 MVPQ14764 893 aaKnown RBP4.15□□□□□ -1.75
LINC01539-203ENST00000589447 TMEM259Q4ZIN3 620 aa4.15□□□□□ -1.75
LINC01539-203ENST00000589447 ARSIQ5FYB1 569 aa4.15□□□□□ -1.75
LINC01539-203ENST00000589447 ZKSCAN2Q63HK3 967 aa4.15□□□□□ -1.75
LINC01539-203ENST00000589447 ZSCAN30Q86W11 494 aa4.15□□□□□ -1.75
LINC01539-203ENST00000589447 FTSJ3Q8IY81 847 aaKnown RBP4.15□□□□□ -1.75
LINC01539-203ENST00000589447 PANK1Q8TE04 598 aa4.15□□□□□ -1.75
LINC01539-203ENST00000589447 RUNDC1Q96C34 613 aa4.15□□□□□ -1.75
LINC01539-203ENST00000589447 CFAP53Q96M91 514 aa4.15□□□□□ -1.75
LINC01539-203ENST00000589447 PANK2Q9BZ23 570 aa4.15□□□□□ -1.75
LINC01539-203ENST00000589447 CHMP4BQ9H444 224 aaKnown RBP4.15□□□□□ -1.75
LINC01539-203ENST00000589447 PRM3Q9NNZ6 103 aa4.15□□□□□ -1.75
LINC01539-203ENST00000589447 RGS17Q9UGC6 210 aaPredicted RBP4.15□□□□□ -1.75
LINC01539-203ENST00000589447 DDX19BQ9UMR2 479 aa4.15□□□□□ -1.75
LINC01539-203ENST00000589447 NSD2O96028 1365 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 ADAMTS13Q76LX8 1427 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 PLCH1Q4KWH8 1693 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 ANKRD62A6NC57 917 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 RARSP54136 660 aaKnown RBP4.14□□□□□ -1.75
LINC01539-203ENST00000589447 HDAC1Q13547 482 aaPredicted RBP4.14□□□□□ -1.75
LINC01539-203ENST00000589447 RAB3GAP1Q15042 981 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 CSPP1Q1MSJ5 1256 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 HS1BP3Q53T59 392 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 SMC5Q8IY18 1101 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 PLPP6Q8IY26 295 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 RBM33Q96EV2 1170 aaKnown RBP4.14□□□□□ -1.75
LINC01539-203ENST00000589447 PPP1R9BQ96SB3 815 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 TMUB1Q9BVT8 246 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 KNDC1Q76NI1 1749 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 KIF20BQ96Q89 1820 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 ABCC11Q96J66 1382 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 TMEM2Q9UHN6 1383 aa4.14□□□□□ -1.75
LINC01539-203ENST00000589447 PTPRUQ92729 1446 aa4.13□□□□□ -1.75
LINC01539-203ENST00000589447 OFD1O75665 1012 aa4.13□□□□□ -1.75
LINC01539-203ENST00000589447 NUDT7P0C024 238 aa4.13□□□□□ -1.75
LINC01539-203ENST00000589447 ZNF16P17020 682 aaPredicted RBP4.13□□□□□ -1.75
LINC01539-203ENST00000589447 NASPP49321 788 aaPredicted RBP4.13□□□□□ -1.75
LINC01539-203ENST00000589447 DSG2Q14126 1118 aa4.13□□□□□ -1.75
LINC01539-203ENST00000589447 PPP1R15BQ5SWA1 713 aa4.13□□□□□ -1.75
LINC01539-203ENST00000589447 DNAJC14Q6Y2X3 702 aaPredicted RBP4.13□□□□□ -1.75
LINC01539-203ENST00000589447 KIAA1211Q6ZU35 1233 aa4.13□□□□□ -1.75
LINC01539-203ENST00000589447 DZIP1LQ8IYY4 767 aaKnown RBP4.13□□□□□ -1.75
LINC01539-203ENST00000589447 TNPO1Q92973 898 aaKnown RBP4.13□□□□□ -1.75
LINC01539-203ENST00000589447 ESF1Q9H501 851 aaKnown RBP4.13□□□□□ -1.75
LINC01539-203ENST00000589447 PCDHB15Q9Y5E8 787 aa4.13□□□□□ -1.75
LINC01539-203ENST00000589447 COL22A1Q8NFW1 1626 aaPredicted RBP4.13□□□□□ -1.75
LINC01539-203ENST00000589447 TMEM94Q12767 1356 aa4.13□□□□□ -1.75
LINC01539-203ENST00000589447 AK9Q5TCS8 1911 aa4.13□□□□□ -1.75
LINC01539-203ENST00000589447 NSD3Q9BZ95 1437 aa4.12□□□□□ -1.75
LINC01539-203ENST00000589447 ARHGEF28Q8N1W1 1705 aaKnown RBP4.12□□□□□ -1.75
LINC01539-203ENST00000589447 FMN2Q9NZ56 1722 aa4.12□□□□□ -1.75
LINC01539-203ENST00000589447 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.12□□□□□ -1.75
LINC01539-203ENST00000589447 TMEM88BA6NKF7 163 aa4.12□□□□□ -1.75
LINC01539-203ENST00000589447 KDM4AO75164 1064 aa4.12□□□□□ -1.75
LINC01539-203ENST00000589447 FCHSD2O94868 740 aa4.12□□□□□ -1.75
LINC01539-203ENST00000589447 MCM5P33992 734 aa4.12□□□□□ -1.75
LINC01539-203ENST00000589447 DDIT3P35638 169 aa4.12□□□□□ -1.75
LINC01539-203ENST00000589447 LSM11P83369 360 aaKnown RBP eCLIP4.12□□□□□ -1.75
LINC01539-203ENST00000589447 KLHL40Q2TBA0 621 aa4.12□□□□□ -1.75
LINC01539-203ENST00000589447 PPP4R3BQ5MIZ7 849 aa4.12□□□□□ -1.75
LINC01539-203ENST00000589447 CFAP70Q5T0N1 1121 aa4.12□□□□□ -1.75
LINC01539-203ENST00000589447 NOL8Q76FK4 1167 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms