RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 LINC00116Q8NCU8 138 aa15.68■□□□□ 0.1
DNMT1-218ENST00000589294 ERBB4Q15303 1308 aa15.68■□□□□ 0.1
DNMT1-218ENST00000589294 EIF2S2P20042 333 aaKnown RBP15.67■□□□□ 0.1
DNMT1-218ENST00000589294 HDGFL1Q5TGJ6 251 aa15.67■□□□□ 0.1
DNMT1-218ENST00000589294 CNTNAP4Q9C0A0 1308 aa15.67■□□□□ 0.1
DNMT1-218ENST00000589294 SOCS7O14512 581 aa15.66■□□□□ 0.1
DNMT1-218ENST00000589294 CRKLP46109 303 aaKnown RBP15.66■□□□□ 0.1
DNMT1-218ENST00000589294 INTS5Q6P9B9 1019 aaKnown RBP15.66■□□□□ 0.1
DNMT1-218ENST00000589294 CCDC87Q9NVE4 849 aa15.66■□□□□ 0.1
DNMT1-218ENST00000589294 CICQ96RK0 1608 aaPredicted RBP15.65■□□□□ 0.1
DNMT1-218ENST00000589294 A1BGP04217 495 aa15.65■□□□□ 0.1
DNMT1-218ENST00000589294 NBPF14Q5TI25 921 aa15.65■□□□□ 0.1
DNMT1-218ENST00000589294 DBF4Q9UBU7 674 aaPredicted RBP15.65■□□□□ 0.1
DNMT1-218ENST00000589294 RPS6KA4O75676 772 aa15.64■□□□□ 0.09
DNMT1-218ENST00000589294 AKT1S1Q96B36 256 aa15.64■□□□□ 0.09
DNMT1-218ENST00000589294 STK31Q9BXU1 1019 aa15.64■□□□□ 0.09
DNMT1-218ENST00000589294 DDX21Q9NR30 783 aaKnown RBP eCLIP15.64■□□□□ 0.09
DNMT1-218ENST00000589294 NBPF26B4DH59 902 aa15.63■□□□□ 0.09
DNMT1-218ENST00000589294 IL6STP40189 918 aaPredicted RBP15.63■□□□□ 0.09
DNMT1-218ENST00000589294 PDIA6Q15084 440 aa15.63■□□□□ 0.09
DNMT1-218ENST00000589294 ALDH1L2Q3SY69 923 aa15.63■□□□□ 0.09
DNMT1-218ENST00000589294 NBPF10Q6P3W6 841 aaKnown RBP15.63■□□□□ 0.09
DNMT1-218ENST00000589294 NBPF15Q8N660 670 aa15.63■□□□□ 0.09
DNMT1-218ENST00000589294 AK7Q96M32 723 aa15.63■□□□□ 0.09
DNMT1-218ENST00000589294 HYPKQ9NX55 129 aa15.63■□□□□ 0.09
DNMT1-218ENST00000589294 SLC4A2P04920 1241 aa15.62■□□□□ 0.09
DNMT1-218ENST00000589294 CANXP27824 592 aaKnown RBP15.62■□□□□ 0.09
DNMT1-218ENST00000589294 EIF5P55010 431 aaKnown RBP15.62■□□□□ 0.09
DNMT1-218ENST00000589294 SLC15A2Q16348 729 aa15.62■□□□□ 0.09
DNMT1-218ENST00000589294 NPM2Q86SE8 214 aaKnown RBP15.62■□□□□ 0.09
DNMT1-218ENST00000589294 NECTIN2Q92692 538 aa15.62■□□□□ 0.09
DNMT1-218ENST00000589294 STK32BQ9NY57 414 aa15.62■□□□□ 0.09
DNMT1-218ENST00000589294 RTCBQ9Y3I0 505 aaKnown RBP15.62■□□□□ 0.09
DNMT1-218ENST00000589294 TJP1Q07157 1748 aa15.62■□□□□ 0.09
DNMT1-218ENST00000589294 C5P01031 1676 aa15.61■□□□□ 0.09
DNMT1-218ENST00000589294 A0A087WZG4 1122 aa15.61■□□□□ 0.09
DNMT1-218ENST00000589294 GNPATO15228 680 aa15.61■□□□□ 0.09
DNMT1-218ENST00000589294 ADRA2BP18089 450 aa15.61■□□□□ 0.09
DNMT1-218ENST00000589294 FLAD1Q8NFF5 587 aa15.61■□□□□ 0.09
DNMT1-218ENST00000589294 TFCP2L1Q9NZI6 479 aa15.61■□□□□ 0.09
DNMT1-218ENST00000589294 CHPF2Q9P2E5 772 aa15.61■□□□□ 0.09
DNMT1-218ENST00000589294 ZBTB1Q9Y2K1 713 aa15.61■□□□□ 0.09
DNMT1-218ENST00000589294 SSFA2P28290 1259 aa15.6■□□□□ 0.09
DNMT1-218ENST00000589294 RARSP54136 660 aaKnown RBP15.6■□□□□ 0.09
DNMT1-218ENST00000589294 BRPF1P55201 1214 aaPredicted RBP15.6■□□□□ 0.09
DNMT1-218ENST00000589294 TRAPPC3LQ5T215 181 aa15.6■□□□□ 0.09
DNMT1-218ENST00000589294 SSH1Q8WYL5 1049 aa15.6■□□□□ 0.09
DNMT1-218ENST00000589294 TAF1LQ8IZX4 1826 aa15.59■□□□□ 0.09
DNMT1-218ENST00000589294 MYL6BP14649 208 aa15.59■□□□□ 0.09
DNMT1-218ENST00000589294 ZNF827Q17R98 1081 aa15.59■□□□□ 0.09
DNMT1-218ENST00000589294 LRP10Q7Z4F1 713 aa15.59■□□□□ 0.09
DNMT1-218ENST00000589294 RREB1Q92766 1687 aa15.59■□□□□ 0.09
DNMT1-218ENST00000589294 C4BP0C0L5 1744 aa15.59■□□□□ 0.09
DNMT1-218ENST00000589294 COL5A3P25940 1745 aaPredicted RBP15.59■□□□□ 0.09
DNMT1-218ENST00000589294 TCERG1O14776 1098 aaKnown RBP15.58■□□□□ 0.08
DNMT1-218ENST00000589294 PROSER3Q2NL68 480 aa15.58■□□□□ 0.08
DNMT1-218ENST00000589294 MRPL50Q8N5N7 158 aaKnown RBP15.58■□□□□ 0.08
DNMT1-218ENST00000589294 LAMB4A4D0S4 1761 aa15.57■□□□□ 0.08
DNMT1-218ENST00000589294 MYH14Q7Z406 1995 aaKnown RBP15.57■□□□□ 0.08
DNMT1-218ENST00000589294 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.57■□□□□ 0.08
DNMT1-218ENST00000589294 PIP4K2AP48426 406 aaPredicted RBP15.57■□□□□ 0.08
DNMT1-218ENST00000589294 COPS6Q7L5N1 327 aa15.57■□□□□ 0.08
DNMT1-218ENST00000589294 ARHGEF1Q92888 912 aaKnown RBP15.57■□□□□ 0.08
DNMT1-218ENST00000589294 ANO8Q9HCE9 1232 aaPredicted RBP15.57■□□□□ 0.08
DNMT1-218ENST00000589294 SMC4Q9NTJ3 1288 aa15.57■□□□□ 0.08
DNMT1-218ENST00000589294 RCAN3Q9UKA8 241 aa15.57■□□□□ 0.08
DNMT1-218ENST00000589294 RGL2O15211 777 aa15.56■□□□□ 0.08
DNMT1-218ENST00000589294 ANXA1P04083 346 aa15.56■□□□□ 0.08
DNMT1-218ENST00000589294 RFC4P35249 363 aa15.56■□□□□ 0.08
DNMT1-218ENST00000589294 NUP188Q5SRE5 1749 aa15.55■□□□□ 0.08
DNMT1-218ENST00000589294 ERVV-1B6SEH8 477 aa15.55■□□□□ 0.08
DNMT1-218ENST00000589294 DDX58O95786 925 aaKnown RBP15.55■□□□□ 0.08
DNMT1-218ENST00000589294 AMIGO3Q86WK7 504 aa15.55■□□□□ 0.08
DNMT1-218ENST00000589294 XAGE3Q8WTP9 111 aa15.55■□□□□ 0.08
DNMT1-218ENST00000589294 PHAXQ9H814 394 aaKnown RBP15.55■□□□□ 0.08
DNMT1-218ENST00000589294 NARFQ9UHQ1 456 aa15.55■□□□□ 0.08
DNMT1-218ENST00000589294 ZNF330Q9Y3S2 320 aaPredicted RBP15.55■□□□□ 0.08
DNMT1-218ENST00000589294 COL15A1P39059 1388 aa15.54■□□□□ 0.08
DNMT1-218ENST00000589294 IPO8O15397 1037 aaKnown RBP15.54■□□□□ 0.08
DNMT1-218ENST00000589294 ZPR1O75312 459 aa15.54■□□□□ 0.08
DNMT1-218ENST00000589294 BCAR3O75815 825 aa15.54■□□□□ 0.08
DNMT1-218ENST00000589294 AIMP1Q12904 312 aaKnown RBP15.54■□□□□ 0.08
DNMT1-218ENST00000589294 FLIIQ13045 1269 aa15.54■□□□□ 0.08
DNMT1-218ENST00000589294 KIF6Q6ZMV9 814 aa15.54■□□□□ 0.08
DNMT1-218ENST00000589294 ANKRD13DQ6ZTN6 518 aa15.54■□□□□ 0.08
DNMT1-218ENST00000589294 G2E3Q7L622 706 aa15.54■□□□□ 0.08
DNMT1-218ENST00000589294 DZIP3Q86Y13 1208 aaKnown RBP15.54■□□□□ 0.08
DNMT1-218ENST00000589294 COL23A1Q86Y22 540 aaPredicted RBP15.54■□□□□ 0.08
DNMT1-218ENST00000589294 ARHGAP45Q92619 1136 aa15.54■□□□□ 0.08
DNMT1-218ENST00000589294 ARXQ96QS3 562 aa15.54■□□□□ 0.08
DNMT1-218ENST00000589294 CACNA1FO60840 1977 aa15.53■□□□□ 0.08
DNMT1-218ENST00000589294 PTPRCP08575 1304 aa15.53■□□□□ 0.08
DNMT1-218ENST00000589294 PNPLA7Q6ZV29 1317 aa15.53■□□□□ 0.08
DNMT1-218ENST00000589294 PHF14O94880 888 aa15.53■□□□□ 0.08
DNMT1-218ENST00000589294 CLEC4GQ6UXB4 293 aa15.53■□□□□ 0.08
DNMT1-218ENST00000589294 TTLL7Q6ZT98 887 aa15.53■□□□□ 0.08
DNMT1-218ENST00000589294 PLBD2Q8NHP8 589 aa15.53■□□□□ 0.08
DNMT1-218ENST00000589294 BCL2L13Q9BXK5 485 aa15.53■□□□□ 0.08
DNMT1-218ENST00000589294 TBC1D2BQ9UPU7 963 aa15.53■□□□□ 0.08
DNMT1-218ENST00000589294 MAP3K15Q6ZN16 1313 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms