RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 TOGARAM1Q9Y4F4 1720 aa15.28■□□□□ 0.04
CCBE1-203ENST00000589116 SPATA31A1Q5TZJ5 1347 aa15.27■□□□□ 0.04
CCBE1-203ENST00000589116 UBR2Q8IWV8 1755 aa15.27■□□□□ 0.04
CCBE1-203ENST00000589116 FLIIQ13045 1269 aa15.27■□□□□ 0.03
CCBE1-203ENST00000589116 VPS72Q15906 364 aa15.27■□□□□ 0.03
CCBE1-203ENST00000589116 TTC5Q8N0Z6 440 aa15.26■□□□□ 0.03
CCBE1-203ENST00000589116 C5P01031 1676 aa15.26■□□□□ 0.03
CCBE1-203ENST00000589116 LAMB4A4D0S4 1761 aa15.26■□□□□ 0.03
CCBE1-203ENST00000589116 ZBTB7BO15156 539 aaPredicted RBP15.25■□□□□ 0.03
CCBE1-203ENST00000589116 G2E3Q7L622 706 aa15.25■□□□□ 0.03
CCBE1-203ENST00000589116 DDX54Q8TDD1 881 aaKnown RBP15.25■□□□□ 0.03
CCBE1-203ENST00000589116 PCDHB15Q9Y5E8 787 aa15.25■□□□□ 0.03
CCBE1-203ENST00000589116 SPATA31A5Q5VU36 1347 aa15.25■□□□□ 0.03
CCBE1-203ENST00000589116 SPATA31A7Q8IWB4 1347 aa15.25■□□□□ 0.03
CCBE1-203ENST00000589116 RWDD1Q9H446 243 aaPredicted RBP15.25■□□□□ 0.03
CCBE1-203ENST00000589116 DBF4Q9UBU7 674 aaPredicted RBP15.25■□□□□ 0.03
CCBE1-203ENST00000589116 ONECUT3O60422 494 aaPredicted RBP15.24■□□□□ 0.03
CCBE1-203ENST00000589116 EIF2S2P20042 333 aaKnown RBP15.24■□□□□ 0.03
CCBE1-203ENST00000589116 CCT4P50991 539 aaKnown RBP15.24■□□□□ 0.03
CCBE1-203ENST00000589116 SLC39A6Q13433 755 aa15.24■□□□□ 0.03
CCBE1-203ENST00000589116 NECTIN2Q92692 538 aa15.24■□□□□ 0.03
CCBE1-203ENST00000589116 FMNL2Q96PY5 1086 aa15.24■□□□□ 0.03
CCBE1-203ENST00000589116 EXOC5O00471 708 aa15.23■□□□□ 0.03
CCBE1-203ENST00000589116 FKBP5Q13451 457 aaPredicted RBP15.23■□□□□ 0.03
CCBE1-203ENST00000589116 HDAC1Q13547 482 aaPredicted RBP15.23■□□□□ 0.03
CCBE1-203ENST00000589116 BARGINQ6ZT62 677 aa15.23■□□□□ 0.03
CCBE1-203ENST00000589116 IGHDP01880 384 aa15.22■□□□□ 0.03
CCBE1-203ENST00000589116 CHPF2Q9P2E5 772 aa15.22■□□□□ 0.03
CCBE1-203ENST00000589116 PPP1R1BQ9UD71 204 aaPredicted RBP15.22■□□□□ 0.03
CCBE1-203ENST00000589116 ITGB4P16144 1822 aa15.22■□□□□ 0.03
CCBE1-203ENST00000589116 SNRPA1P09661 255 aaKnown RBP15.22■□□□□ 0.03
CCBE1-203ENST00000589116 ZNF496Q96IT1 587 aaPredicted RBP15.22■□□□□ 0.03
CCBE1-203ENST00000589116 KCPQ6ZWJ8 1503 aa15.21■□□□□ 0.03
CCBE1-203ENST00000589116 HYPKQ9NX55 129 aa15.21■□□□□ 0.03
CCBE1-203ENST00000589116 EZH2Q15910 746 aaKnown RBP15.2■□□□□ 0.02
CCBE1-203ENST00000589116 DDX21Q9NR30 783 aaKnown RBP eCLIP15.2■□□□□ 0.02
CCBE1-203ENST00000589116 TMOD3Q9NYL9 352 aa15.2■□□□□ 0.02
CCBE1-203ENST00000589116 FAM98CQ17RN3 349 aaKnown RBP15.19■□□□□ 0.02
CCBE1-203ENST00000589116 F6X3S4 739 aa15.19■□□□□ 0.02
CCBE1-203ENST00000589116 DDB1Q16531 1140 aa15.19■□□□□ 0.02
CCBE1-203ENST00000589116 PHAXQ9H814 394 aaKnown RBP15.19■□□□□ 0.02
CCBE1-203ENST00000589116 DOT1LQ8TEK3 1739 aa15.19■□□□□ 0.02
CCBE1-203ENST00000589116 ERBB4Q15303 1308 aa15.18■□□□□ 0.02
CCBE1-203ENST00000589116 ATP10DQ9P241 1426 aa15.18■□□□□ 0.02
CCBE1-203ENST00000589116 PRAMEF22A3QJZ6 481 aa15.18■□□□□ 0.02
CCBE1-203ENST00000589116 SLC4A10Q6U841 1118 aa15.18■□□□□ 0.02
CCBE1-203ENST00000589116 FAM182BQ5T319 152 aa15.17■□□□□ 0.02
CCBE1-203ENST00000589116 BCL9O00512 1426 aa15.17■□□□□ 0.02
CCBE1-203ENST00000589116 TSHZ2Q9NRE2 1034 aa15.16■□□□□ 0.02
CCBE1-203ENST00000589116 DDX58O95786 925 aaKnown RBP15.16■□□□□ 0.02
CCBE1-203ENST00000589116 PDIA6Q15084 440 aa15.16■□□□□ 0.02
CCBE1-203ENST00000589116 SMC5Q8IY18 1101 aa15.16■□□□□ 0.02
CCBE1-203ENST00000589116 DNAAF4Q8WXU2 420 aa15.16■□□□□ 0.02
CCBE1-203ENST00000589116 ADCY9O60503 1353 aa15.15■□□□□ 0.02
CCBE1-203ENST00000589116 GNAI3P08754 354 aa15.15■□□□□ 0.02
CCBE1-203ENST00000589116 PROSER3Q2NL68 480 aa15.15■□□□□ 0.02
CCBE1-203ENST00000589116 RPAP2Q8IXW5 612 aaPredicted RBP15.15■□□□□ 0.02
CCBE1-203ENST00000589116 MEIS3Q99687 375 aa15.15■□□□□ 0.02
CCBE1-203ENST00000589116 TNS1Q9HBL0 1735 aaKnown RBP15.15■□□□□ 0.02
CCBE1-203ENST00000589116 PI4KAP2A4QPH2 592 aa15.14■□□□□ 0.01
CCBE1-203ENST00000589116 ANXA1P04083 346 aa15.14■□□□□ 0.01
CCBE1-203ENST00000589116 KSR2Q6VAB6 950 aa15.14■□□□□ 0.01
CCBE1-203ENST00000589116 VSIG10Q8N0Z9 540 aa15.14■□□□□ 0.01
CCBE1-203ENST00000589116 PI4KAP1Q8N8J0 262 aa15.14■□□□□ 0.01
CCBE1-203ENST00000589116 ZNF784Q8NCA9 323 aaPredicted RBP15.14■□□□□ 0.01
CCBE1-203ENST00000589116 PIGBQ92521 554 aa15.14■□□□□ 0.01
CCBE1-203ENST00000589116 SRCIN1Q9C0H9 1055 aa15.14■□□□□ 0.01
CCBE1-203ENST00000589116 IBTKQ9P2D0 1353 aaPredicted RBP15.14■□□□□ 0.01
CCBE1-203ENST00000589116 USP16Q9Y5T5 823 aa15.14■□□□□ 0.01
CCBE1-203ENST00000589116 THSD7AQ9UPZ6 1657 aa15.13■□□□□ 0.01
CCBE1-203ENST00000589116 GCC1Q96CN9 775 aa15.13■□□□□ 0.01
CCBE1-203ENST00000589116 C1orf115Q9H7X2 142 aa15.13■□□□□ 0.01
CCBE1-203ENST00000589116 SPON1Q9HCB6 807 aa15.13■□□□□ 0.01
CCBE1-203ENST00000589116 ANKRD44Q8N8A2 993 aa15.12■□□□□ 0.01
CCBE1-203ENST00000589116 CAMKK2Q96RR4 588 aa15.12■□□□□ 0.01
CCBE1-203ENST00000589116 TEX13AQ9BXU3 409 aaPredicted RBP15.12■□□□□ 0.01
CCBE1-203ENST00000589116 ALDH1L1O75891 902 aa15.12■□□□□ 0.01
CCBE1-203ENST00000589116 GNAI2P04899 355 aa15.12■□□□□ 0.01
CCBE1-203ENST00000589116 BEND3Q5T5X7 828 aa15.12■□□□□ 0.01
CCBE1-203ENST00000589116 NBPF14Q5TI25 921 aa15.12■□□□□ 0.01
CCBE1-203ENST00000589116 LRP10Q7Z4F1 713 aa15.12■□□□□ 0.01
CCBE1-203ENST00000589116 CEP85Q6P2H3 762 aa15.11■□□□□ 0.01
CCBE1-203ENST00000589116 MARCH10Q8NA82 808 aaPredicted RBP15.11■□□□□ 0.01
CCBE1-203ENST00000589116 ATG3Q9NT62 314 aa15.11■□□□□ 0.01
CCBE1-203ENST00000589116 PDZRN3Q9UPQ7 1066 aa15.11■□□□□ 0.01
CCBE1-203ENST00000589116 MAP3K2Q9Y2U5 619 aa15.11■□□□□ 0.01
CCBE1-203ENST00000589116 PTCD1O75127 700 aaKnown RBP15.1■□□□□ 0.01
CCBE1-203ENST00000589116 TRIM37O94972 964 aa15.1■□□□□ 0.01
CCBE1-203ENST00000589116 APBA3O96018 575 aa15.1■□□□□ 0.01
CCBE1-203ENST00000589116 C1QTNF8P60827 252 aa15.1■□□□□ 0.01
CCBE1-203ENST00000589116 SIRT2Q8IXJ6 389 aa15.1■□□□□ 0.01
CCBE1-203ENST00000589116 ASAP1Q9ULH1 1129 aa15.1■□□□□ 0.01
CCBE1-203ENST00000589116 CICQ96RK0 1608 aaPredicted RBP15.1■□□□□ 0.01
CCBE1-203ENST00000589116 ARFGEF2Q9Y6D5 1785 aa15.1■□□□□ 0.01
CCBE1-203ENST00000589116 HMMRO75330 724 aa15.09■□□□□ 0.01
CCBE1-203ENST00000589116 MYL6BP14649 208 aa15.09■□□□□ 0.01
CCBE1-203ENST00000589116 XAGE3Q8WTP9 111 aa15.09■□□□□ 0.01
CCBE1-203ENST00000589116 USP44Q9H0E7 712 aa15.09■□□□□ 0.01
CCBE1-203ENST00000589116 KAT6BQ8WYB5 2073 aa15.09■□□□□ 0.01
CCBE1-203ENST00000589116 KCNQ2O43526 872 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms