RNA–Protein interactions for RNA: ENST00000588993.1

ZNF260-203, Transcript of zinc finger protein 260, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF260, Length 4,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-203ENST00000588993 STAC3Q96MF2 364 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 RRAGCQ9HB90 399 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 TRPC6Q9Y210 931 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 MYPNQ86TC9 1320 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 KIF20BQ96Q89 1820 aa2.52□□□□□ -2.01
ZNF260-203ENST00000588993 SBF1O95248 1867 aa2.51□□□□□ -2.01
ZNF260-203ENST00000588993 ZNF526Q8TF50 670 aaPredicted RBP2.51□□□□□ -2.01
ZNF260-203ENST00000588993 GRIPAP1Q4V328 841 aa2.51□□□□□ -2.01
ZNF260-203ENST00000588993 C1QTNF1Q9BXJ1 281 aa2.51□□□□□ -2.01
ZNF260-203ENST00000588993 CABP2Q9NPB3 220 aa2.51□□□□□ -2.01
ZNF260-203ENST00000588993 CFAP65Q6ZU64 1925 aaKnown RBP2.51□□□□□ -2.01
ZNF260-203ENST00000588993 UNCXA6NJT0 531 aa2.51□□□□□ -2.01
ZNF260-203ENST00000588993 ARHGEF6Q15052 776 aa2.51□□□□□ -2.01
ZNF260-203ENST00000588993 LMOD2Q6P5Q4 547 aa2.51□□□□□ -2.01
ZNF260-203ENST00000588993 DDX17Q92841 729 aaKnown RBP2.51□□□□□ -2.01
ZNF260-203ENST00000588993 TFCP2L1Q9NZI6 479 aa2.51□□□□□ -2.01
ZNF260-203ENST00000588993 PSME4Q14997 1843 aa2.51□□□□□ -2.01
ZNF260-203ENST00000588993 DAPK1P53355 1430 aa2.51□□□□□ -2.01
ZNF260-203ENST00000588993 TESPA1A2RU30 521 aaPredicted RBP2.5□□□□□ -2.01
ZNF260-203ENST00000588993 KLHL34Q8N239 644 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 IRF2BPLQ9H1B7 796 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 PIM2Q9P1W9 311 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 ERBB4Q15303 1308 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 WDR17Q8IZU2 1322 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 NOGQ13253 232 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 ARHGAP27Q6ZUM4 889 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 NLGN1Q8N2Q7 840 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 HCN4Q9Y3Q4 1203 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 CGNL1Q0VF96 1302 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 ANKRD36BQ8N2N9 1353 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 EDC4Q6P2E9 1401 aaKnown RBP2.5□□□□□ -2.01
ZNF260-203ENST00000588993 DALRD3Q5D0E6 543 aaKnown RBP2.5□□□□□ -2.01
ZNF260-203ENST00000588993 FBXO46Q6PJ61 603 aaPredicted RBP2.5□□□□□ -2.01
ZNF260-203ENST00000588993 NLRP13Q86W25 1043 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 TLL2Q9Y6L7 1015 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 COL9A1P20849 921 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 CFAP44Q96MT7 982 aa2.5□□□□□ -2.01
ZNF260-203ENST00000588993 COL1A1P02452 1464 aaPredicted RBP2.49□□□□□ -2.01
ZNF260-203ENST00000588993 LCE2BO14633 110 aa2.49□□□□□ -2.01
ZNF260-203ENST00000588993 ZNF76P36508 570 aa2.49□□□□□ -2.01
ZNF260-203ENST00000588993 MAP3K11Q16584 847 aa2.49□□□□□ -2.01
ZNF260-203ENST00000588993 KCNH5Q8NCM2 988 aa2.49□□□□□ -2.01
ZNF260-203ENST00000588993 TTC21AQ8NDW8 1320 aa2.49□□□□□ -2.01
ZNF260-203ENST00000588993 RNF181Q9P0P0 153 aa2.49□□□□□ -2.01
ZNF260-203ENST00000588993 ANKRD50Q9ULJ7 1429 aa2.49□□□□□ -2.01
ZNF260-203ENST00000588993 ITGBL1O95965 494 aaPredicted RBP2.49□□□□□ -2.01
ZNF260-203ENST00000588993 EIF5P55010 431 aaKnown RBP2.49□□□□□ -2.01
ZNF260-203ENST00000588993 ZNF827Q17R98 1081 aa2.49□□□□□ -2.01
ZNF260-203ENST00000588993 CCDC102AQ96A19 550 aa2.49□□□□□ -2.01
ZNF260-203ENST00000588993 MKRN1Q9UHC7 482 aaKnown RBP2.49□□□□□ -2.01
ZNF260-203ENST00000588993 UBR3Q6ZT12 1888 aa2.49□□□□□ -2.01
ZNF260-203ENST00000588993 BHMG1C9JSJ3 638 aaPredicted RBP2.49□□□□□ -2.01
ZNF260-203ENST00000588993 CAPNS2Q96L46 248 aa2.49□□□□□ -2.01
ZNF260-203ENST00000588993 PAPPA2Q9BXP8 1791 aa2.49□□□□□ -2.01
ZNF260-203ENST00000588993 MINK1Q8N4C8 1332 aaPredicted RBP2.48□□□□□ -2.01
ZNF260-203ENST00000588993 DOT1LQ8TEK3 1739 aa2.48□□□□□ -2.01
ZNF260-203ENST00000588993 FCHSD2O94868 740 aa2.48□□□□□ -2.01
ZNF260-203ENST00000588993 PRRX2Q99811 253 aa2.48□□□□□ -2.01
ZNF260-203ENST00000588993 HIRIP3Q9BW71 556 aaPredicted RBP2.48□□□□□ -2.01
ZNF260-203ENST00000588993 MAP3K19Q56UN5 1328 aa2.48□□□□□ -2.01
ZNF260-203ENST00000588993 CDHR2Q9BYE9 1310 aa2.48□□□□□ -2.01
ZNF260-203ENST00000588993 PKN1Q16512 942 aa2.48□□□□□ -2.01
ZNF260-203ENST00000588993 MARCH10Q8NA82 808 aaPredicted RBP2.48□□□□□ -2.01
ZNF260-203ENST00000588993 HTATIP2Q9BUP3 242 aa2.48□□□□□ -2.01
ZNF260-203ENST00000588993 NR2E3Q9Y5X4 410 aa2.48□□□□□ -2.01
ZNF260-203ENST00000588993 MAP3K13O43283 966 aa2.48□□□□□ -2.01
ZNF260-203ENST00000588993 COL25A1Q9BXS0 654 aaPredicted RBP2.48□□□□□ -2.01
ZNF260-203ENST00000588993 FER1L6Q2WGJ9 1857 aa2.48□□□□□ -2.01
ZNF260-203ENST00000588993 RPAP1Q9BWH6 1393 aaPredicted RBP2.47□□□□□ -2.01
ZNF260-203ENST00000588993 PRR36Q9H6K5 1346 aa2.47□□□□□ -2.01
ZNF260-203ENST00000588993 LRRC37AA6NMS7 1700 aa2.47□□□□□ -2.01
ZNF260-203ENST00000588993 TNFRSF10AO00220 468 aa2.47□□□□□ -2.01
ZNF260-203ENST00000588993 GPR101Q96P66 508 aaPredicted RBP2.47□□□□□ -2.01
ZNF260-203ENST00000588993 HPS5Q9UPZ3 1129 aa2.47□□□□□ -2.01
ZNF260-203ENST00000588993 FAM205AQ6ZU69 1335 aa2.47□□□□□ -2.01
ZNF260-203ENST00000588993 ZNF644Q9H582 1327 aaPredicted RBP2.47□□□□□ -2.01
ZNF260-203ENST00000588993 NKX2-3Q8TAU0 364 aa2.47□□□□□ -2.01
ZNF260-203ENST00000588993 VPS33BQ9H267 617 aa2.47□□□□□ -2.01
ZNF260-203ENST00000588993 PRMT2P55345 433 aa2.47□□□□□ -2.01
ZNF260-203ENST00000588993 ERMP1Q7Z2K6 904 aa2.47□□□□□ -2.01
ZNF260-203ENST00000588993 COL23A1Q86Y22 540 aaPredicted RBP2.47□□□□□ -2.01
ZNF260-203ENST00000588993 STRN4Q9NRL3 753 aa2.47□□□□□ -2.01
ZNF260-203ENST00000588993 MON2Q7Z3U7 1717 aa2.47□□□□□ -2.01
ZNF260-203ENST00000588993 CPSF1Q10570 1443 aaKnown RBP2.46□□□□□ -2.01
ZNF260-203ENST00000588993 ZNF326Q5BKZ1 582 aaKnown RBP2.46□□□□□ -2.01
ZNF260-203ENST00000588993 USP50Q70EL3 339 aaPredicted RBP2.46□□□□□ -2.01
ZNF260-203ENST00000588993 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.46□□□□□ -2.01
ZNF260-203ENST00000588993 RNF166Q96A37 237 aaPredicted RBP2.46□□□□□ -2.01
ZNF260-203ENST00000588993 HACL1Q9UJ83 578 aa2.46□□□□□ -2.01
ZNF260-203ENST00000588993 BCS1LQ9Y276 419 aa2.46□□□□□ -2.01
ZNF260-203ENST00000588993 PARP3Q9Y6F1 533 aa2.46□□□□□ -2.01
ZNF260-203ENST00000588993 MAP2P11137 1827 aaKnown RBP2.46□□□□□ -2.01
ZNF260-203ENST00000588993 ZNF236Q9UL36 1845 aa2.46□□□□□ -2.01
ZNF260-203ENST00000588993 USP47Q96K76 1375 aa2.46□□□□□ -2.02
ZNF260-203ENST00000588993 RC3H1Q5TC82 1133 aaKnown RBP2.46□□□□□ -2.02
ZNF260-203ENST00000588993 LARP1Q6PKG0 1096 aaKnown RBP2.46□□□□□ -2.02
ZNF260-203ENST00000588993 KDM2AQ9Y2K7 1162 aa2.46□□□□□ -2.02
ZNF260-203ENST00000588993 RPTORQ8N122 1335 aa2.46□□□□□ -2.02
ZNF260-203ENST00000588993 NCAPD2Q15021 1401 aa2.46□□□□□ -2.02
ZNF260-203ENST00000588993 PLEKHG3A1L390 1219 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms