RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 FAM122AQ96E09 287 aa10.27□□□□□ -0.77
TPM4-210ENST00000588507 RNF186Q9NXI6 227 aa10.27□□□□□ -0.77
TPM4-210ENST00000588507 MAP2P11137 1827 aaKnown RBP10.27□□□□□ -0.77
TPM4-210ENST00000588507 INSRP06213 1382 aa10.26□□□□□ -0.77
TPM4-210ENST00000588507 POLRMTO00411 1230 aaKnown RBP10.26□□□□□ -0.77
TPM4-210ENST00000588507 C21orf2O43822 256 aa10.26□□□□□ -0.77
TPM4-210ENST00000588507 RPS6KA4O75676 772 aa10.26□□□□□ -0.77
TPM4-210ENST00000588507 FKBP8Q14318 412 aa10.26□□□□□ -0.77
TPM4-210ENST00000588507 CHRDL2Q6WN34 429 aa10.26□□□□□ -0.77
TPM4-210ENST00000588507 C2CD5Q86YS7 1000 aa10.26□□□□□ -0.77
TPM4-210ENST00000588507 LTV1Q96GA3 475 aaPredicted RBP10.26□□□□□ -0.77
TPM4-210ENST00000588507 HDAC9Q9UKV0 1011 aa10.26□□□□□ -0.77
TPM4-210ENST00000588507 RNF123Q5XPI4 1314 aa10.26□□□□□ -0.77
TPM4-210ENST00000588507 H0YIN7 160 aa10.25□□□□□ -0.77
TPM4-210ENST00000588507 HOXD11P31277 338 aaPredicted RBP10.25□□□□□ -0.77
TPM4-210ENST00000588507 RC3H1Q5TC82 1133 aaKnown RBP10.25□□□□□ -0.77
TPM4-210ENST00000588507 BICDL1Q6ZP65 573 aa10.25□□□□□ -0.77
TPM4-210ENST00000588507 ZNF692Q9BU19 519 aaPredicted RBP10.25□□□□□ -0.77
TPM4-210ENST00000588507 CGNL1Q0VF96 1302 aa10.25□□□□□ -0.77
TPM4-210ENST00000588507 SMG6Q86US8 1419 aaKnown RBP10.24□□□□□ -0.77
TPM4-210ENST00000588507 FER1L6Q2WGJ9 1857 aa10.24□□□□□ -0.77
TPM4-210ENST00000588507 POTEFA5A3E0 1075 aa10.24□□□□□ -0.77
TPM4-210ENST00000588507 CELF2O95319 508 aaKnown RBP10.24□□□□□ -0.77
TPM4-210ENST00000588507 TM4SF1P30408 202 aa10.24□□□□□ -0.77
TPM4-210ENST00000588507 FBXO46Q6PJ61 603 aaPredicted RBP10.24□□□□□ -0.77
TPM4-210ENST00000588507 RBM27Q9P2N5 1060 aaKnown RBP10.24□□□□□ -0.77
TPM4-210ENST00000588507 H0YGN5 161 aa10.23□□□□□ -0.77
TPM4-210ENST00000588507 ZNF541Q9H0D2 1346 aa10.23□□□□□ -0.77
TPM4-210ENST00000588507 USP31Q70CQ4 1352 aa10.23□□□□□ -0.77
TPM4-210ENST00000588507 CACNA1AO00555 2505 aa10.23□□□□□ -0.77
TPM4-210ENST00000588507 DLEC1Q9Y238 1755 aa10.22□□□□□ -0.77
TPM4-210ENST00000588507 SYNE4Q8N205 404 aa10.22□□□□□ -0.77
TPM4-210ENST00000588507 IP6K1Q92551 441 aa10.22□□□□□ -0.77
TPM4-210ENST00000588507 SNX27Q96L92 541 aa10.22□□□□□ -0.77
TPM4-210ENST00000588507 SRP68Q9UHB9 627 aaKnown RBP10.22□□□□□ -0.77
TPM4-210ENST00000588507 PCDH11XQ9BZA7 1347 aa10.22□□□□□ -0.77
TPM4-210ENST00000588507 PCDH11YQ9BZA8 1340 aa10.22□□□□□ -0.77
TPM4-210ENST00000588507 FAM208AQ9UK61 1670 aaKnown RBP10.22□□□□□ -0.77
TPM4-210ENST00000588507 KIF23Q02241 960 aaPredicted RBP10.21□□□□□ -0.77
TPM4-210ENST00000588507 INTS3Q68E01 1043 aaKnown RBP10.21□□□□□ -0.77
TPM4-210ENST00000588507 CCDC24Q8N4L8 307 aa10.21□□□□□ -0.77
TPM4-210ENST00000588507 ZNF622Q969S3 477 aaKnown RBP eCLIP10.21□□□□□ -0.774e-7■■□□□ 11.9
TPM4-210ENST00000588507 ASAP1Q9ULH1 1129 aa10.21□□□□□ -0.77
TPM4-210ENST00000588507 LTN1O94822 1766 aa10.21□□□□□ -0.78
TPM4-210ENST00000588507 ITGB4P16144 1822 aa10.21□□□□□ -0.78
TPM4-210ENST00000588507 ANKRD13DQ6ZTN6 518 aa10.2□□□□□ -0.78
TPM4-210ENST00000588507 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.2□□□□□ -0.782e-6■■■■■ 40.6
TPM4-210ENST00000588507 RAPGEF4Q8WZA2 1011 aa10.2□□□□□ -0.78
TPM4-210ENST00000588507 CNTNAP4Q9C0A0 1308 aa10.2□□□□□ -0.78
TPM4-210ENST00000588507 USP42Q9H9J4 1324 aaKnown RBP10.2□□□□□ -0.78
TPM4-210ENST00000588507 MKI67P46013 3256 aaKnown RBP10.19□□□□□ -0.78
TPM4-210ENST00000588507 CD163L1Q9NR16 1453 aa10.19□□□□□ -0.78
TPM4-210ENST00000588507 TATP17735 454 aaPredicted RBP10.19□□□□□ -0.78
TPM4-210ENST00000588507 LMOD1P29536 600 aaPredicted RBP10.19□□□□□ -0.78
TPM4-210ENST00000588507 GPC2Q8N158 579 aa10.19□□□□□ -0.78
TPM4-210ENST00000588507 RAPGEFL1Q9UHV5 662 aa10.19□□□□□ -0.78
TPM4-210ENST00000588507 STXBP5LQ9Y2K9 1186 aa10.19□□□□□ -0.78
TPM4-210ENST00000588507 KIAA0100Q14667 2235 aaKnown RBP10.19□□□□□ -0.78
TPM4-210ENST00000588507 ERBB4Q15303 1308 aa10.18□□□□□ -0.78
TPM4-210ENST00000588507 MAP3K19Q56UN5 1328 aa10.18□□□□□ -0.78
TPM4-210ENST00000588507 AKAP11Q9UKA4 1901 aa10.18□□□□□ -0.78
TPM4-210ENST00000588507 SOGA3Q5TF21 947 aa10.18□□□□□ -0.78
TPM4-210ENST00000588507 USP50Q70EL3 339 aaPredicted RBP10.18□□□□□ -0.78
TPM4-210ENST00000588507 ZNF408Q9H9D4 720 aa10.18□□□□□ -0.78
TPM4-210ENST00000588507 FAM155AB1AL88 458 aaPredicted RBP10.17□□□□□ -0.78
TPM4-210ENST00000588507 CYP27B1O15528 508 aa10.17□□□□□ -0.78
TPM4-210ENST00000588507 EN2P19622 333 aaPredicted RBP10.17□□□□□ -0.78
TPM4-210ENST00000588507 HUNKP57058 714 aa10.17□□□□□ -0.78
TPM4-210ENST00000588507 ZNF296Q8WUU4 475 aaPredicted RBP10.17□□□□□ -0.78
TPM4-210ENST00000588507 CCDC102AQ96A19 550 aa10.17□□□□□ -0.78
TPM4-210ENST00000588507 TMOD3Q9NYL9 352 aa10.17□□□□□ -0.78
TPM4-210ENST00000588507 PDZRN3Q9UPQ7 1066 aa10.17□□□□□ -0.78
TPM4-210ENST00000588507 KDM2AQ9Y2K7 1162 aa10.17□□□□□ -0.78
TPM4-210ENST00000588507 SERPINB2P05120 415 aa10.16□□□□□ -0.78
TPM4-210ENST00000588507 RGMBQ6NW40 437 aa10.16□□□□□ -0.78
TPM4-210ENST00000588507 ATG3Q9NT62 314 aa10.16□□□□□ -0.78
TPM4-210ENST00000588507 FZD9O00144 591 aa10.15□□□□□ -0.78
TPM4-210ENST00000588507 EPS15P42566 896 aa10.15□□□□□ -0.78
TPM4-210ENST00000588507 CSRNP1Q96S65 589 aa10.15□□□□□ -0.78
TPM4-210ENST00000588507 SCN11AQ9UI33 1791 aa10.14□□□□□ -0.79
TPM4-210ENST00000588507 SOX1O00570 391 aaPredicted RBP10.14□□□□□ -0.79
TPM4-210ENST00000588507 ZPR1O75312 459 aa10.14□□□□□ -0.79
TPM4-210ENST00000588507 NFIXQ14938 502 aa10.14□□□□□ -0.79
TPM4-210ENST00000588507 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.14□□□□□ -0.79
TPM4-210ENST00000588507 REM2Q8IYK8 340 aaPredicted RBP10.14□□□□□ -0.79
TPM4-210ENST00000588507 LRCH3Q96II8 777 aa10.14□□□□□ -0.79
TPM4-210ENST00000588507 SLC4A9Q96Q91 983 aa10.14□□□□□ -0.79
TPM4-210ENST00000588507 RBM42Q9BTD8 480 aaKnown RBP10.14□□□□□ -0.79
TPM4-210ENST00000588507 GLIS2Q9BZE0 524 aaPredicted RBP10.14□□□□□ -0.79
TPM4-210ENST00000588507 AFDNP55196 1824 aaKnown RBP10.14□□□□□ -0.79
TPM4-210ENST00000588507 PAPPA2Q9BXP8 1791 aa10.14□□□□□ -0.79
TPM4-210ENST00000588507 KDRP35968 1356 aa10.14□□□□□ -0.79
TPM4-210ENST00000588507 KTN1Q86UP2 1357 aaKnown RBP10.14□□□□□ -0.79
TPM4-210ENST00000588507 NKX1-1Q15270 411 aaPredicted RBP10.13□□□□□ -0.79
TPM4-210ENST00000588507 NBPF6Q5VWK0 638 aa10.13□□□□□ -0.79
TPM4-210ENST00000588507 USPL1Q5W0Q7 1092 aa10.13□□□□□ -0.79
TPM4-210ENST00000588507 CNKSR1Q969H4 720 aa10.13□□□□□ -0.79
TPM4-210ENST00000588507 NBPF4Q96M43 638 aa10.13□□□□□ -0.79
TPM4-210ENST00000588507 PRO3102Q9H379 93 aa10.13□□□□□ -0.79
TPM4-210ENST00000588507 ZNF277Q9NRM2 450 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms