RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 CCDC146Q8IYE0 955 aa11.71□□□□□ -0.53
SDF2-207ENST00000588472 NLGN1Q8N2Q7 840 aa11.71□□□□□ -0.53
SDF2-207ENST00000588472 ZNF526Q8TF50 670 aaPredicted RBP11.71□□□□□ -0.53
SDF2-207ENST00000588472 FMNL2Q96PY5 1086 aa11.71□□□□□ -0.53
SDF2-207ENST00000588472 PLEKHF1Q96S99 279 aa11.71□□□□□ -0.53
SDF2-207ENST00000588472 THUMPD2Q9BTF0 503 aaKnown RBP11.71□□□□□ -0.53
SDF2-207ENST00000588472 ZBTB1Q9Y2K1 713 aa11.71□□□□□ -0.53
SDF2-207ENST00000588472 ADAMTS7Q9UKP4 1686 aa11.71□□□□□ -0.54
SDF2-207ENST00000588472 CEMIPQ8WUJ3 1361 aa11.7□□□□□ -0.54
SDF2-207ENST00000588472 COL24A1Q17RW2 1714 aa11.7□□□□□ -0.54
SDF2-207ENST00000588472 ZPR1O75312 459 aa11.7□□□□□ -0.54
SDF2-207ENST00000588472 GYS1P13807 737 aa11.7□□□□□ -0.54
SDF2-207ENST00000588472 WDR43Q15061 677 aaKnown RBP eCLIP11.7□□□□□ -0.54
SDF2-207ENST00000588472 NEUROD2Q15784 382 aa11.7□□□□□ -0.54
SDF2-207ENST00000588472 NFE2L2Q16236 605 aa11.7□□□□□ -0.54
SDF2-207ENST00000588472 VSIG10Q8N0Z9 540 aa11.7□□□□□ -0.54
SDF2-207ENST00000588472 CD2APQ9Y5K6 639 aa11.7□□□□□ -0.54
SDF2-207ENST00000588472 CEP350Q5VT06 3117 aa11.69□□□□□ -0.54
SDF2-207ENST00000588472 HEG1Q9ULI3 1381 aa11.69□□□□□ -0.54
SDF2-207ENST00000588472 ZNF316A6NFI3 1004 aaPredicted RBP11.69□□□□□ -0.54
SDF2-207ENST00000588472 HTATSF1O43719 755 aaKnown RBP11.69□□□□□ -0.54
SDF2-207ENST00000588472 FKBP8Q14318 412 aa11.69□□□□□ -0.54
SDF2-207ENST00000588472 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
SDF2-207ENST00000588472 USPL1Q5W0Q7 1092 aa11.69□□□□□ -0.54
SDF2-207ENST00000588472 PRKRIP1Q9H875 184 aaPredicted RBP11.69□□□□□ -0.54
SDF2-207ENST00000588472 RRP7AQ9Y3A4 280 aaKnown RBP11.69□□□□□ -0.54
SDF2-207ENST00000588472 PARP3Q9Y6F1 533 aa11.69□□□□□ -0.54
SDF2-207ENST00000588472 SOS1Q07889 1333 aaPredicted RBP11.68□□□□□ -0.54
SDF2-207ENST00000588472 PRAMEF22A3QJZ6 481 aa11.68□□□□□ -0.54
SDF2-207ENST00000588472 A1BGP04217 495 aa11.68□□□□□ -0.54
SDF2-207ENST00000588472 PIP4K2AP48426 406 aaPredicted RBP11.68□□□□□ -0.54
SDF2-207ENST00000588472 RIPK4P57078 832 aa11.68□□□□□ -0.54
SDF2-207ENST00000588472 TEX13AQ9BXU3 409 aaPredicted RBP11.68□□□□□ -0.54
SDF2-207ENST00000588472 SIPA1L3O60292 1781 aaPredicted RBP11.67□□□□□ -0.54
SDF2-207ENST00000588472 USP42Q9H9J4 1324 aaKnown RBP11.67□□□□□ -0.54
SDF2-207ENST00000588472 NPM2Q86SE8 214 aaKnown RBP11.67□□□□□ -0.54
SDF2-207ENST00000588472 ADAMTS8Q9UP79 889 aa11.67□□□□□ -0.54
SDF2-207ENST00000588472 ADCY9O60503 1353 aa11.67□□□□□ -0.54
SDF2-207ENST00000588472 COL15A1P39059 1388 aa11.67□□□□□ -0.54
SDF2-207ENST00000588472 BICDL1Q6ZP65 573 aa11.66□□□□□ -0.54
SDF2-207ENST00000588472 TBC1D2BQ9UPU7 963 aa11.66□□□□□ -0.54
SDF2-207ENST00000588472 USP16Q9Y5T5 823 aa11.66□□□□□ -0.54
SDF2-207ENST00000588472 UBR2Q8IWV8 1755 aa11.66□□□□□ -0.54
SDF2-207ENST00000588472 C4AP0C0L4 1744 aa11.66□□□□□ -0.54
SDF2-207ENST00000588472 CICQ96RK0 1608 aaPredicted RBP11.65□□□□□ -0.54
SDF2-207ENST00000588472 DLG5Q8TDM6 1919 aa11.65□□□□□ -0.54
SDF2-207ENST00000588472 A0A0G2JLW4 131 aa11.65□□□□□ -0.54
SDF2-207ENST00000588472 SNRPA1P09661 255 aaKnown RBP11.65□□□□□ -0.54
SDF2-207ENST00000588472 TMPOP42166 694 aaKnown RBP11.65□□□□□ -0.54
SDF2-207ENST00000588472 DDR1Q08345 913 aa11.65□□□□□ -0.54
SDF2-207ENST00000588472 NARFQ9UHQ1 456 aa11.65□□□□□ -0.54
SDF2-207ENST00000588472 A0A087WZG4 1122 aa11.64□□□□□ -0.55
SDF2-207ENST00000588472 EIF5P55010 431 aaKnown RBP11.64□□□□□ -0.55
SDF2-207ENST00000588472 PNISRQ8TF01 805 aaKnown RBP11.64□□□□□ -0.55
SDF2-207ENST00000588472 RUNDC1Q96C34 613 aa11.64□□□□□ -0.55
SDF2-207ENST00000588472 LAS1LQ9Y4W2 734 aaKnown RBP11.64□□□□□ -0.55
SDF2-207ENST00000588472 TM4SF1P30408 202 aa11.63□□□□□ -0.55
SDF2-207ENST00000588472 IL6STP40189 918 aaPredicted RBP11.63□□□□□ -0.55
SDF2-207ENST00000588472 APLP1P51693 650 aa11.63□□□□□ -0.55
SDF2-207ENST00000588472 NFIXQ14938 502 aa11.63□□□□□ -0.55
SDF2-207ENST00000588472 NGEFQ8N5V2 710 aa11.63□□□□□ -0.55
SDF2-207ENST00000588472 TSPYL4Q9UJ04 414 aa11.63□□□□□ -0.55
SDF2-207ENST00000588472 POLRMTO00411 1230 aaKnown RBP11.62□□□□□ -0.55
SDF2-207ENST00000588472 KIF3CO14782 793 aa11.62□□□□□ -0.55
SDF2-207ENST00000588472 DPEP1P16444 411 aa11.62□□□□□ -0.55
SDF2-207ENST00000588472 CCDC184Q52MB2 194 aa11.62□□□□□ -0.55
SDF2-207ENST00000588472 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
SDF2-207ENST00000588472 BCS1LQ9Y276 419 aa11.62□□□□□ -0.55
SDF2-207ENST00000588472 ANP32CO43423 234 aa11.61□□□□□ -0.55
SDF2-207ENST00000588472 SERPINB2P05120 415 aa11.61□□□□□ -0.55
SDF2-207ENST00000588472 EIF4A1P60842 406 aaKnown RBP11.61□□□□□ -0.55
SDF2-207ENST00000588472 TGFB2P61812 414 aa11.61□□□□□ -0.55
SDF2-207ENST00000588472 LMOD3Q0VAK6 560 aa11.61□□□□□ -0.55
SDF2-207ENST00000588472 TBC1D9BQ66K14 1250 aa11.61□□□□□ -0.55
SDF2-207ENST00000588472 DZIP3Q86Y13 1208 aaKnown RBP11.61□□□□□ -0.55
SDF2-207ENST00000588472 NBPF26B4DH59 902 aa11.6□□□□□ -0.55
SDF2-207ENST00000588472 NPHP1O15259 732 aa11.6□□□□□ -0.55
SDF2-207ENST00000588472 MYL6BP14649 208 aa11.6□□□□□ -0.55
SDF2-207ENST00000588472 CHRNA5P30532 468 aa11.6□□□□□ -0.55
SDF2-207ENST00000588472 NBPF10Q6P3W6 841 aaKnown RBP11.6□□□□□ -0.55
SDF2-207ENST00000588472 CCDC24Q8N4L8 307 aa11.6□□□□□ -0.55
SDF2-207ENST00000588472 NBPF15Q8N660 670 aa11.6□□□□□ -0.55
SDF2-207ENST00000588472 C10orf71Q711Q0 1435 aa11.6□□□□□ -0.55
SDF2-207ENST00000588472 N4BP2Q86UW6 1770 aaPredicted RBP11.59□□□□□ -0.55
SDF2-207ENST00000588472 PXDNLA1KZ92 1463 aa11.59□□□□□ -0.55
SDF2-207ENST00000588472 APAF1O14727 1248 aa11.59□□□□□ -0.55
SDF2-207ENST00000588472 EIF2S2P20042 333 aaKnown RBP11.59□□□□□ -0.55
SDF2-207ENST00000588472 NECTIN2Q92692 538 aa11.59□□□□□ -0.55
SDF2-207ENST00000588472 TRIM35Q9UPQ4 493 aa11.59□□□□□ -0.55
SDF2-207ENST00000588472 FAM177BA6PVY3 158 aa11.58□□□□□ -0.56
SDF2-207ENST00000588472 TOMM70O94826 608 aa11.58□□□□□ -0.56
SDF2-207ENST00000588472 CAMTA2O94983 1202 aa11.58□□□□□ -0.56
SDF2-207ENST00000588472 ARHGAP27Q6ZUM4 889 aa11.58□□□□□ -0.56
SDF2-207ENST00000588472 SETDB2Q96T68 719 aa11.58□□□□□ -0.56
SDF2-207ENST00000588472 KCNA3P22001 575 aa11.57□□□□□ -0.56
SDF2-207ENST00000588472 MRS2Q9HD23 443 aa11.57□□□□□ -0.56
SDF2-207ENST00000588472 PIM2Q9P1W9 311 aa11.57□□□□□ -0.56
SDF2-207ENST00000588472 KDM3BQ7LBC6 1761 aa11.56□□□□□ -0.56
SDF2-207ENST00000588472 KRT24Q2M2I5 525 aa11.56□□□□□ -0.56
SDF2-207ENST00000588472 DALRD3Q5D0E6 543 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms