RNA–Protein interactions for RNA: ENST00000588468.1

CNN1-207, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-207ENST00000588468 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
CNN1-207ENST00000588468 TEX13AQ9BXU3 409 aaPredicted RBP13.18□□□□□ -0.3
CNN1-207ENST00000588468 PRKRIP1Q9H875 184 aaPredicted RBP13.18□□□□□ -0.3
CNN1-207ENST00000588468 BRCA1P38398 1863 aaKnown RBP13.18□□□□□ -0.3
CNN1-207ENST00000588468 NRXN2Q9P2S2 1712 aa13.17□□□□□ -0.3
CNN1-207ENST00000588468 MMP10P09238 476 aa13.17□□□□□ -0.3
CNN1-207ENST00000588468 GYS1P13807 737 aa13.17□□□□□ -0.3
CNN1-207ENST00000588468 MCM10Q7L590 875 aa13.17□□□□□ -0.3
CNN1-207ENST00000588468 NLGN2Q8NFZ4 835 aa13.17□□□□□ -0.3
CNN1-207ENST00000588468 AFDNP55196 1824 aaKnown RBP13.17□□□□□ -0.3
CNN1-207ENST00000588468 ZBTB1Q9Y2K1 713 aa13.16□□□□□ -0.3
CNN1-207ENST00000588468 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.3
CNN1-207ENST00000588468 ZPR1O75312 459 aa13.14□□□□□ -0.31
CNN1-207ENST00000588468 LMOD3Q0VAK6 560 aa13.14□□□□□ -0.31
CNN1-207ENST00000588468 DCTN1Q14203 1278 aa13.14□□□□□ -0.31
CNN1-207ENST00000588468 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.31
CNN1-207ENST00000588468 TAF7Q15545 349 aaPredicted RBP13.14□□□□□ -0.31
CNN1-207ENST00000588468 PNISRQ8TF01 805 aaKnown RBP13.14□□□□□ -0.31
CNN1-207ENST00000588468 NARFQ9UHQ1 456 aa13.14□□□□□ -0.31
CNN1-207ENST00000588468 PXDNLA1KZ92 1463 aa13.14□□□□□ -0.31
CNN1-207ENST00000588468 DLEC1Q9Y238 1755 aa13.14□□□□□ -0.31
CNN1-207ENST00000588468 ARFGEF1Q9Y6D6 1849 aa13.13□□□□□ -0.31
CNN1-207ENST00000588468 A0A087WZG4 1122 aa13.13□□□□□ -0.31
CNN1-207ENST00000588468 GPR162Q16538 588 aa13.13□□□□□ -0.31
CNN1-207ENST00000588468 SRP68Q9UHB9 627 aaKnown RBP13.13□□□□□ -0.31
CNN1-207ENST00000588468 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
CNN1-207ENST00000588468 KCNQ3O43525 872 aa13.12□□□□□ -0.31
CNN1-207ENST00000588468 SNRPA1P09661 255 aaKnown RBP13.12□□□□□ -0.31
CNN1-207ENST00000588468 YY1P25490 414 aa13.12□□□□□ -0.31
CNN1-207ENST00000588468 IL6STP40189 918 aaPredicted RBP13.12□□□□□ -0.31
CNN1-207ENST00000588468 EIF5P55010 431 aaKnown RBP13.12□□□□□ -0.31
CNN1-207ENST00000588468 ZNF316A6NFI3 1004 aaPredicted RBP13.11□□□□□ -0.31
CNN1-207ENST00000588468 CANXP27824 592 aaKnown RBP13.11□□□□□ -0.31
CNN1-207ENST00000588468 FKBP8Q14318 412 aa13.11□□□□□ -0.31
CNN1-207ENST00000588468 GRIN3BO60391 1043 aa13.1□□□□□ -0.31
CNN1-207ENST00000588468 TMPOP42166 694 aaKnown RBP13.1□□□□□ -0.31
CNN1-207ENST00000588468 DDR1Q08345 913 aa13.1□□□□□ -0.31
CNN1-207ENST00000588468 USPL1Q5W0Q7 1092 aa13.1□□□□□ -0.31
CNN1-207ENST00000588468 PELP1Q8IZL8 1130 aaKnown RBP13.1□□□□□ -0.31
CNN1-207ENST00000588468 RUNDC1Q96C34 613 aa13.1□□□□□ -0.31
CNN1-207ENST00000588468 YBX3P16989 372 aaKnown RBP eCLIP13.09□□□□□ -0.31
CNN1-207ENST00000588468 RIPK4P57078 832 aa13.09□□□□□ -0.31
CNN1-207ENST00000588468 TGFB2P61812 414 aa13.09□□□□□ -0.31
CNN1-207ENST00000588468 NPM2Q86SE8 214 aaKnown RBP13.09□□□□□ -0.31
CNN1-207ENST00000588468 BABAM1Q9NWV8 329 aa13.09□□□□□ -0.31
CNN1-207ENST00000588468 ANKRD31Q8N7Z5 1873 aa13.08□□□□□ -0.32
CNN1-207ENST00000588468 POLRMTO00411 1230 aaKnown RBP13.08□□□□□ -0.32
CNN1-207ENST00000588468 RGL2O15211 777 aa13.08□□□□□ -0.32
CNN1-207ENST00000588468 TM4SF1P30408 202 aa13.08□□□□□ -0.32
CNN1-207ENST00000588468 THUMPD2Q9BTF0 503 aaKnown RBP13.08□□□□□ -0.32
CNN1-207ENST00000588468 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
CNN1-207ENST00000588468 A1BGP04217 495 aa13.07□□□□□ -0.32
CNN1-207ENST00000588468 NFIXQ14938 502 aa13.07□□□□□ -0.32
CNN1-207ENST00000588468 CCDC146Q8IYE0 955 aa13.07□□□□□ -0.32
CNN1-207ENST00000588468 USP16Q9Y5T5 823 aa13.07□□□□□ -0.32
CNN1-207ENST00000588468 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
CNN1-207ENST00000588468 NUP98P52948 1817 aa13.06□□□□□ -0.32
CNN1-207ENST00000588468 COL11A2P13942 1736 aaPredicted RBP13.06□□□□□ -0.32
CNN1-207ENST00000588468 EIF4A1P60842 406 aaKnown RBP13.06□□□□□ -0.32
CNN1-207ENST00000588468 TSPYL4Q9UJ04 414 aa13.06□□□□□ -0.32
CNN1-207ENST00000588468 ADAMTS8Q9UP79 889 aa13.06□□□□□ -0.32
CNN1-207ENST00000588468 ZNF330Q9Y3S2 320 aaPredicted RBP13.06□□□□□ -0.32
CNN1-207ENST00000588468 ERBB4Q15303 1308 aa13.06□□□□□ -0.32
CNN1-207ENST00000588468 ARFGEF2Q9Y6D5 1785 aa13.05□□□□□ -0.32
CNN1-207ENST00000588468 PRAMEF22A3QJZ6 481 aa13.05□□□□□ -0.32
CNN1-207ENST00000588468 GIGYF1O75420 1035 aaPredicted RBP13.05□□□□□ -0.32
CNN1-207ENST00000588468 CAMTA2O94983 1202 aa13.05□□□□□ -0.32
CNN1-207ENST00000588468 DZIP3Q86Y13 1208 aaKnown RBP13.05□□□□□ -0.32
CNN1-207ENST00000588468 MIS18AQ9NYP9 233 aa13.05□□□□□ -0.32
CNN1-207ENST00000588468 ANKRD36CQ5JPF3 1778 aa13.04□□□□□ -0.32
CNN1-207ENST00000588468 ZNF652Q9Y2D9 606 aa13.04□□□□□ -0.32
CNN1-207ENST00000588468 RRP7AQ9Y3A4 280 aaKnown RBP13.04□□□□□ -0.32
CNN1-207ENST00000588468 NBPF26B4DH59 902 aa13.03□□□□□ -0.32
CNN1-207ENST00000588468 ANP32CO43423 234 aa13.03□□□□□ -0.32
CNN1-207ENST00000588468 SERPINB2P05120 415 aa13.03□□□□□ -0.32
CNN1-207ENST00000588468 DPEP1P16444 411 aa13.03□□□□□ -0.32
CNN1-207ENST00000588468 NBPF10Q6P3W6 841 aaKnown RBP13.03□□□□□ -0.32
CNN1-207ENST00000588468 CLEC4GQ6UXB4 293 aa13.03□□□□□ -0.32
CNN1-207ENST00000588468 NBPF15Q8N660 670 aa13.03□□□□□ -0.32
CNN1-207ENST00000588468 TRIM35Q9UPQ4 493 aa13.03□□□□□ -0.32
CNN1-207ENST00000588468 TBC1D2BQ9UPU7 963 aa13.03□□□□□ -0.32
CNN1-207ENST00000588468 A0A0G2JLW4 131 aa13.02□□□□□ -0.33
CNN1-207ENST00000588468 TBC1D9BQ66K14 1250 aa13.02□□□□□ -0.33
CNN1-207ENST00000588468 ADCY9O60503 1353 aa13.02□□□□□ -0.33
CNN1-207ENST00000588468 CACNA1SQ13698 1873 aa13.02□□□□□ -0.33
CNN1-207ENST00000588468 PIP4K2AP48426 406 aaPredicted RBP13.01□□□□□ -0.33
CNN1-207ENST00000588468 CALD1Q05682 793 aaKnown RBP13.01□□□□□ -0.33
CNN1-207ENST00000588468 NEUROD2Q15784 382 aa13.01□□□□□ -0.33
CNN1-207ENST00000588468 PDZRN3Q9UPQ7 1066 aa13.01□□□□□ -0.33
CNN1-207ENST00000588468 ATP10DQ9P241 1426 aa13.01□□□□□ -0.33
CNN1-207ENST00000588468 CHL1O00533 1208 aa13□□□□□ -0.33
CNN1-207ENST00000588468 BICDL1Q6ZP65 573 aa13□□□□□ -0.33
CNN1-207ENST00000588468 CNBD1Q8NA66 436 aa13□□□□□ -0.33
CNN1-207ENST00000588468 SETDB2Q96T68 719 aa13□□□□□ -0.33
CNN1-207ENST00000588468 PIM2Q9P1W9 311 aa13□□□□□ -0.33
CNN1-207ENST00000588468 BCS1LQ9Y276 419 aa13□□□□□ -0.33
CNN1-207ENST00000588468 SBF1O95248 1867 aa12.99□□□□□ -0.33
CNN1-207ENST00000588468 IBTKQ9P2D0 1353 aaPredicted RBP12.99□□□□□ -0.33
CNN1-207ENST00000588468 HOXB7P09629 217 aa12.99□□□□□ -0.33
CNN1-207ENST00000588468 KCNA3P22001 575 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms