RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 DCAF8L1A6NGE4 600 aa30.98■■■□□ 2.55
CHAF1A-205ENST00000587580 GYS1P13807 737 aa30.98■■■□□ 2.55
CHAF1A-205ENST00000587580 TMPOP42166 694 aaKnown RBP30.98■■■□□ 2.55
CHAF1A-205ENST00000587580 RUNDC1Q96C34 613 aa30.98■■■□□ 2.55
CHAF1A-205ENST00000587580 COL15A1P39059 1388 aa30.97■■■□□ 2.55
CHAF1A-205ENST00000587580 SRP68Q9UHB9 627 aaKnown RBP30.97■■■□□ 2.55
CHAF1A-205ENST00000587580 USP42Q9H9J4 1324 aaKnown RBP30.97■■■□□ 2.55
CHAF1A-205ENST00000587580 CANXP27824 592 aaKnown RBP30.96■■■□□ 2.55
CHAF1A-205ENST00000587580 NLGN1Q8N2Q7 840 aa30.96■■■□□ 2.55
CHAF1A-205ENST00000587580 MIS18AQ9NYP9 233 aa30.96■■■□□ 2.55
CHAF1A-205ENST00000587580 RRP7AQ9Y3A4 280 aaKnown RBP30.96■■■□□ 2.55
CHAF1A-205ENST00000587580 ANP32CO43423 234 aa30.95■■■□□ 2.55
CHAF1A-205ENST00000587580 MMP10P09238 476 aa30.95■■■□□ 2.55
CHAF1A-205ENST00000587580 LMOD3Q0VAK6 560 aa30.94■■■□□ 2.54
CHAF1A-205ENST00000587580 NLGN2Q8NFZ4 835 aa30.94■■■□□ 2.54
CHAF1A-205ENST00000587580 PNISRQ8TF01 805 aaKnown RBP30.94■■■□□ 2.54
CHAF1A-205ENST00000587580 NEUROD2Q15784 382 aa30.92■■■□□ 2.54
CHAF1A-205ENST00000587580 PRAMEF22A3QJZ6 481 aa30.91■■■□□ 2.54
CHAF1A-205ENST00000587580 ZPR1O75312 459 aa30.91■■■□□ 2.54
CHAF1A-205ENST00000587580 SNRPA1P09661 255 aaKnown RBP30.91■■■□□ 2.54
CHAF1A-205ENST00000587580 CD2APQ9Y5K6 639 aa30.91■■■□□ 2.54
CHAF1A-205ENST00000587580 CCDC184Q52MB2 194 aa30.9■■■□□ 2.54
CHAF1A-205ENST00000587580 USPL1Q5W0Q7 1092 aa30.89■■■□□ 2.54
CHAF1A-205ENST00000587580 USP16Q9Y5T5 823 aa30.89■■■□□ 2.54
CHAF1A-205ENST00000587580 LAMB4A4D0S4 1761 aa30.89■■■□□ 2.54
CHAF1A-205ENST00000587580 A1BGP04217 495 aa30.88■■■□□ 2.53
CHAF1A-205ENST00000587580 EIF5P55010 431 aaKnown RBP30.88■■■□□ 2.53
CHAF1A-205ENST00000587580 FKBP8Q14318 412 aa30.88■■■□□ 2.53
CHAF1A-205ENST00000587580 NARFQ9UHQ1 456 aa30.88■■■□□ 2.53
CHAF1A-205ENST00000587580 ZNF330Q9Y3S2 320 aaPredicted RBP30.88■■■□□ 2.53
CHAF1A-205ENST00000587580 PARP3Q9Y6F1 533 aa30.86■■■□□ 2.53
CHAF1A-205ENST00000587580 A0A087WZG4 1122 aa30.85■■■□□ 2.53
CHAF1A-205ENST00000587580 IL6STP40189 918 aaPredicted RBP30.85■■■□□ 2.53
CHAF1A-205ENST00000587580 TSPYL4Q9UJ04 414 aa30.85■■■□□ 2.53
CHAF1A-205ENST00000587580 SCN7AQ01118 1682 aa30.84■■■□□ 2.53
CHAF1A-205ENST00000587580 EIF4A1P60842 406 aaKnown RBP30.83■■■□□ 2.53
CHAF1A-205ENST00000587580 PELP1Q8IZL8 1130 aaKnown RBP30.83■■■□□ 2.53
CHAF1A-205ENST00000587580 TRIM35Q9UPQ4 493 aa30.83■■■□□ 2.53
CHAF1A-205ENST00000587580 KIF13BQ9NQT8 1826 aa30.82■■■□□ 2.52
CHAF1A-205ENST00000587580 PIP4K2AP48426 406 aaPredicted RBP30.82■■■□□ 2.52
CHAF1A-205ENST00000587580 NPM2Q86SE8 214 aaKnown RBP30.82■■■□□ 2.52
CHAF1A-205ENST00000587580 MRS2Q9HD23 443 aa30.82■■■□□ 2.52
CHAF1A-205ENST00000587580 C10orf71Q711Q0 1435 aa30.81■■■□□ 2.52
CHAF1A-205ENST00000587580 GPR162Q16538 588 aa30.81■■■□□ 2.52
CHAF1A-205ENST00000587580 DDR1Q08345 913 aa30.8■■■□□ 2.52
CHAF1A-205ENST00000587580 BCL2L12Q9HB09 334 aa30.8■■■□□ 2.52
CHAF1A-205ENST00000587580 APAF1O14727 1248 aa30.79■■■□□ 2.52
CHAF1A-205ENST00000587580 GIGYF1O75420 1035 aaPredicted RBP30.79■■■□□ 2.52
CHAF1A-205ENST00000587580 BABAM1Q9NWV8 329 aa30.79■■■□□ 2.52
CHAF1A-205ENST00000587580 TBC1D2BQ9UPU7 963 aa30.79■■■□□ 2.52
CHAF1A-205ENST00000587580 BCORQ6W2J9 1755 aa30.77■■■□□ 2.52
CHAF1A-205ENST00000587580 TM4SF1P30408 202 aa30.77■■■□□ 2.52
CHAF1A-205ENST00000587580 POLRMTO00411 1230 aaKnown RBP30.76■■■□□ 2.51
CHAF1A-205ENST00000587580 NFIXQ14938 502 aa30.76■■■□□ 2.51
CHAF1A-205ENST00000587580 KIAA1551Q9HCM1 1747 aa30.76■■■□□ 2.51
CHAF1A-205ENST00000587580 NBPF26B4DH59 902 aa30.75■■■□□ 2.51
CHAF1A-205ENST00000587580 NBPF10Q6P3W6 841 aaKnown RBP30.75■■■□□ 2.51
CHAF1A-205ENST00000587580 NBPF15Q8N660 670 aa30.75■■■□□ 2.51
CHAF1A-205ENST00000587580 DZIP3Q86Y13 1208 aaKnown RBP30.74■■■□□ 2.51
CHAF1A-205ENST00000587580 LAS1LQ9Y4W2 734 aaKnown RBP30.74■■■□□ 2.51
CHAF1A-205ENST00000587580 PXDNLA1KZ92 1463 aa30.74■■■□□ 2.51
CHAF1A-205ENST00000587580 N4BP2Q86UW6 1770 aaPredicted RBP30.74■■■□□ 2.51
CHAF1A-205ENST00000587580 AFDNP55196 1824 aaKnown RBP30.73■■■□□ 2.51
CHAF1A-205ENST00000587580 CAMTA2O94983 1202 aa30.72■■■□□ 2.51
CHAF1A-205ENST00000587580 YBX3P16989 372 aaKnown RBP eCLIP30.72■■■□□ 2.51
CHAF1A-205ENST00000587580 NRXN2Q9P2S2 1712 aa30.71■■■□□ 2.51
CHAF1A-205ENST00000587580 BICDL1Q6ZP65 573 aa30.71■■■□□ 2.51
CHAF1A-205ENST00000587580 CHL1O00533 1208 aa30.7■■■□□ 2.51
CHAF1A-205ENST00000587580 TGFB2P61812 414 aa30.7■■■□□ 2.51
CHAF1A-205ENST00000587580 TBC1D9BQ66K14 1250 aa30.7■■■□□ 2.51
CHAF1A-205ENST00000587580 WWC3Q9ULE0 1092 aa30.7■■■□□ 2.51
CHAF1A-205ENST00000587580 SERPINB2P05120 415 aa30.68■■■□□ 2.5
CHAF1A-205ENST00000587580 CHD4Q14839 1912 aa30.68■■■□□ 2.5
CHAF1A-205ENST00000587580 YY1P25490 414 aa30.67■■■□□ 2.5
CHAF1A-205ENST00000587580 A0A0G2JLW4 131 aa30.65■■■□□ 2.5
CHAF1A-205ENST00000587580 GRIN3BO60391 1043 aa30.65■■■□□ 2.5
CHAF1A-205ENST00000587580 DPEP1P16444 411 aa30.65■■■□□ 2.5
CHAF1A-205ENST00000587580 CFAP44Q96MT7 982 aa30.65■■■□□ 2.5
CHAF1A-205ENST00000587580 CARMIL3Q8ND23 1372 aa30.65■■■□□ 2.5
CHAF1A-205ENST00000587580 MYL6BP14649 208 aa30.64■■■□□ 2.5
CHAF1A-205ENST00000587580 EIF2S2P20042 333 aaKnown RBP30.64■■■□□ 2.5
CHAF1A-205ENST00000587580 CALD1Q05682 793 aaKnown RBP30.64■■■□□ 2.5
CHAF1A-205ENST00000587580 NGEFQ8N5V2 710 aa30.64■■■□□ 2.5
CHAF1A-205ENST00000587580 ZNF652Q9Y2D9 606 aa30.64■■■□□ 2.5
CHAF1A-205ENST00000587580 ERBB4Q15303 1308 aa30.64■■■□□ 2.5
CHAF1A-205ENST00000587580 SENP3-EIF4A1A0A087X0R7 540 aa30.63■■■□□ 2.49
CHAF1A-205ENST00000587580 KRT24Q2M2I5 525 aa30.63■■■□□ 2.49
CHAF1A-205ENST00000587580 UTRNP46939 3433 aa30.63■■■□□ 2.49
CHAF1A-205ENST00000587580 BRCA1P38398 1863 aaKnown RBP30.62■■■□□ 2.49
CHAF1A-205ENST00000587580 CLEC4GQ6UXB4 293 aa30.61■■■□□ 2.49
CHAF1A-205ENST00000587580 SETDB2Q96T68 719 aa30.61■■■□□ 2.49
CHAF1A-205ENST00000587580 MBIPQ9NS73 344 aa30.61■■■□□ 2.49
CHAF1A-205ENST00000587580 IFT57Q9NWB7 429 aa30.61■■■□□ 2.49
CHAF1A-205ENST00000587580 GOLGB1Q14789 3259 aaKnown RBP30.6■■■□□ 2.49
CHAF1A-205ENST00000587580 ZNF853P0CG23 659 aa30.59■■■□□ 2.49
CHAF1A-205ENST00000587580 GNAI1P63096 354 aa30.59■■■□□ 2.49
CHAF1A-205ENST00000587580 RGL2O15211 777 aa30.58■■■□□ 2.49
CHAF1A-205ENST00000587580 KIF6Q6ZMV9 814 aa30.58■■■□□ 2.49
CHAF1A-205ENST00000587580 NECTIN2Q92692 538 aa30.58■■■□□ 2.49
CHAF1A-205ENST00000587580 CHRNA5P30532 468 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms