RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
CLPTM1-207ENST00000587537 ELL2O00472 640 aaPredicted RBP13.22□□□□□ -0.29
CLPTM1-207ENST00000587537 TRIM37O94972 964 aa13.22□□□□□ -0.29
CLPTM1-207ENST00000587537 FAM182BQ5T319 152 aa13.22□□□□□ -0.29
CLPTM1-207ENST00000587537 SSH1Q8WYL5 1049 aa13.22□□□□□ -0.29
CLPTM1-207ENST00000587537 DDX21Q9NR30 783 aaKnown RBP eCLIP13.22□□□□□ -0.29
CLPTM1-207ENST00000587537 ATP6V1AP38606 617 aa13.21□□□□□ -0.29
CLPTM1-207ENST00000587537 KRT24Q2M2I5 525 aa13.21□□□□□ -0.29
CLPTM1-207ENST00000587537 RC3H1Q5TC82 1133 aaKnown RBP13.21□□□□□ -0.29
CLPTM1-207ENST00000587537 NPM2Q86SE8 214 aaKnown RBP13.21□□□□□ -0.29
CLPTM1-207ENST00000587537 RREB1Q92766 1687 aa13.21□□□□□ -0.3
CLPTM1-207ENST00000587537 CNTNAP4Q9C0A0 1308 aa13.2□□□□□ -0.3
CLPTM1-207ENST00000587537 DDX58O95786 925 aaKnown RBP13.2□□□□□ -0.3
CLPTM1-207ENST00000587537 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
CLPTM1-207ENST00000587537 EIF2S2P20042 333 aaKnown RBP13.2□□□□□ -0.3
CLPTM1-207ENST00000587537 CANXP27824 592 aaKnown RBP13.2□□□□□ -0.3
CLPTM1-207ENST00000587537 MRPL50Q8N5N7 158 aaKnown RBP13.2□□□□□ -0.3
CLPTM1-207ENST00000587537 API5Q9BZZ5 524 aaKnown RBP13.2□□□□□ -0.3
CLPTM1-207ENST00000587537 CCNL1Q9UK58 526 aaPredicted RBP13.2□□□□□ -0.3
CLPTM1-207ENST00000587537 TAF1LQ8IZX4 1826 aa13.2□□□□□ -0.3
CLPTM1-207ENST00000587537 EP400Q96L91 3159 aa13.19□□□□□ -0.3
CLPTM1-207ENST00000587537 RGL2O15211 777 aa13.19□□□□□ -0.3
CLPTM1-207ENST00000587537 APBA3O96018 575 aa13.19□□□□□ -0.3
CLPTM1-207ENST00000587537 CYP19A1P11511 503 aaPredicted RBP13.19□□□□□ -0.3
CLPTM1-207ENST00000587537 PDE3AQ14432 1141 aa13.19□□□□□ -0.3
CLPTM1-207ENST00000587537 ZKSCAN2Q63HK3 967 aa13.19□□□□□ -0.3
CLPTM1-207ENST00000587537 IL6STP40189 918 aaPredicted RBP13.18□□□□□ -0.3
CLPTM1-207ENST00000587537 BAG6P46379 1132 aa13.18□□□□□ -0.3
CLPTM1-207ENST00000587537 RRP1P56182 461 aaKnown RBP13.18□□□□□ -0.3
CLPTM1-207ENST00000587537 DNAJC10Q8IXB1 793 aa13.18□□□□□ -0.3
CLPTM1-207ENST00000587537 CHMP4BQ9H444 224 aaKnown RBP13.18□□□□□ -0.3
CLPTM1-207ENST00000587537 CCDC87Q9NVE4 849 aa13.18□□□□□ -0.3
CLPTM1-207ENST00000587537 CHPF2Q9P2E5 772 aa13.18□□□□□ -0.3
CLPTM1-207ENST00000587537 USP16Q9Y5T5 823 aa13.18□□□□□ -0.3
CLPTM1-207ENST00000587537 PXDNLA1KZ92 1463 aa13.17□□□□□ -0.3
CLPTM1-207ENST00000587537 A0A087WZG4 1122 aa13.17□□□□□ -0.3
CLPTM1-207ENST00000587537 NEFLP07196 543 aa13.17□□□□□ -0.3
CLPTM1-207ENST00000587537 FLIIQ13045 1269 aa13.17□□□□□ -0.3
CLPTM1-207ENST00000587537 ATF7IPQ6VMQ6 1270 aa13.17□□□□□ -0.3
CLPTM1-207ENST00000587537 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
CLPTM1-207ENST00000587537 IBTKQ9P2D0 1353 aaPredicted RBP13.17□□□□□ -0.3
CLPTM1-207ENST00000587537 BCAR3O75815 825 aa13.16□□□□□ -0.3
CLPTM1-207ENST00000587537 AAMPQ13685 434 aa13.16□□□□□ -0.3
CLPTM1-207ENST00000587537 SUPT16HQ9Y5B9 1047 aaKnown RBP13.16□□□□□ -0.3
CLPTM1-207ENST00000587537 C4BP0C0L5 1744 aa13.16□□□□□ -0.3
CLPTM1-207ENST00000587537 PRAMEF22A3QJZ6 481 aa13.15□□□□□ -0.3
CLPTM1-207ENST00000587537 CRKLP46109 303 aaKnown RBP13.15□□□□□ -0.3
CLPTM1-207ENST00000587537 PDIA6Q15084 440 aa13.15□□□□□ -0.3
CLPTM1-207ENST00000587537 TXNRD1Q16881 649 aa13.15□□□□□ -0.3
CLPTM1-207ENST00000587537 ERICH6BQ5W0A0 696 aa13.15□□□□□ -0.3
CLPTM1-207ENST00000587537 FTSJ3Q8IY81 847 aaKnown RBP13.15□□□□□ -0.3
CLPTM1-207ENST00000587537 NOB1Q9ULX3 412 aaKnown RBP13.15□□□□□ -0.3
CLPTM1-207ENST00000587537 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.31
CLPTM1-207ENST00000587537 FKBP5Q13451 457 aaPredicted RBP13.14□□□□□ -0.31
CLPTM1-207ENST00000587537 ITPK1Q13572 414 aa13.14□□□□□ -0.31
CLPTM1-207ENST00000587537 PTF1AQ7RTS3 328 aa13.14□□□□□ -0.31
CLPTM1-207ENST00000587537 FLAD1Q8NFF5 587 aa13.14□□□□□ -0.31
CLPTM1-207ENST00000587537 FRAT1Q92837 279 aaPredicted RBP13.14□□□□□ -0.31
CLPTM1-207ENST00000587537 BCL2L13Q9BXK5 485 aa13.14□□□□□ -0.31
CLPTM1-207ENST00000587537 RPS6KA4O75676 772 aa13.13□□□□□ -0.31
CLPTM1-207ENST00000587537 EIF5P55010 431 aaKnown RBP13.13□□□□□ -0.31
CLPTM1-207ENST00000587537 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
CLPTM1-207ENST00000587537 KSR2Q6VAB6 950 aa13.13□□□□□ -0.31
CLPTM1-207ENST00000587537 KIF6Q6ZMV9 814 aa13.13□□□□□ -0.31
CLPTM1-207ENST00000587537 LRP10Q7Z4F1 713 aa13.13□□□□□ -0.31
CLPTM1-207ENST00000587537 DZIP1LQ8IYY4 767 aaKnown RBP13.13□□□□□ -0.31
CLPTM1-207ENST00000587537 NECTIN2Q92692 538 aa13.13□□□□□ -0.31
CLPTM1-207ENST00000587537 ABCC4O15439 1325 aa13.13□□□□□ -0.31
CLPTM1-207ENST00000587537 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 ERVV-1B6SEH8 477 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 A1BGP04217 495 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 TRIM27P14373 513 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 CCT4P50991 539 aaKnown RBP13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 HSP90AB3PQ58FF7 597 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 NBPF14Q5TI25 921 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 INTS5Q6P9B9 1019 aaKnown RBP13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 ANKRD13DQ6ZTN6 518 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 PLBD2Q8NHP8 589 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 AK7Q96M32 723 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 HDAC5Q9UQL6 1122 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 ZBTB1Q9Y2K1 713 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 RTCBQ9Y3I0 505 aaKnown RBP13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 ATP10DQ9P241 1426 aa13.12□□□□□ -0.31
CLPTM1-207ENST00000587537 COL15A1P39059 1388 aa13.11□□□□□ -0.31
CLPTM1-207ENST00000587537 MYL6BP14649 208 aa13.11□□□□□ -0.31
CLPTM1-207ENST00000587537 SSFA2P28290 1259 aa13.11□□□□□ -0.31
CLPTM1-207ENST00000587537 COPS6Q7L5N1 327 aa13.11□□□□□ -0.31
CLPTM1-207ENST00000587537 XAGE3Q8WTP9 111 aa13.11□□□□□ -0.31
CLPTM1-207ENST00000587537 CAMKK2Q96RR4 588 aa13.11□□□□□ -0.31
CLPTM1-207ENST00000587537 ZNF652Q9Y2D9 606 aa13.11□□□□□ -0.31
CLPTM1-207ENST00000587537 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
CLPTM1-207ENST00000587537 PROSER3Q2NL68 480 aa13.1□□□□□ -0.31
CLPTM1-207ENST00000587537 INTS3Q68E01 1043 aaKnown RBP13.1□□□□□ -0.31
CLPTM1-207ENST00000587537 CLEC4GQ6UXB4 293 aa13.1□□□□□ -0.31
CLPTM1-207ENST00000587537 RIC3Q7Z5B4 369 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms