RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 BCAR3O75815 825 aa19.15■□□□□ 0.66
NFIX-208ENST00000587260 SF3B2Q13435 895 aaKnown RBP19.15■□□□□ 0.66
NFIX-208ENST00000587260 RREB1Q92766 1687 aa19.14■□□□□ 0.66
NFIX-208ENST00000587260 C4BP0C0L5 1744 aa19.14■□□□□ 0.65
NFIX-208ENST00000587260 SSH1Q8WYL5 1049 aa19.14■□□□□ 0.65
NFIX-208ENST00000587260 PIP4K2AP48426 406 aaPredicted RBP19.13■□□□□ 0.65
NFIX-208ENST00000587260 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.13■□□□□ 0.65
NFIX-208ENST00000587260 CHMP4AQ9BY43 222 aa19.13■□□□□ 0.65
NFIX-208ENST00000587260 MYH14Q7Z406 1995 aaKnown RBP19.12■□□□□ 0.65
NFIX-208ENST00000587260 LINC00116Q8NCU8 138 aa19.12■□□□□ 0.65
NFIX-208ENST00000587260 UPF1Q92900 1129 aaKnown RBP eCLIP19.12■□□□□ 0.65
NFIX-208ENST00000587260 SMC4Q9NTJ3 1288 aa19.12■□□□□ 0.65
NFIX-208ENST00000587260 CHPF2Q9P2E5 772 aa19.12■□□□□ 0.65
NFIX-208ENST00000587260 NUP188Q5SRE5 1749 aa19.12■□□□□ 0.65
NFIX-208ENST00000587260 PLSCR1O15162 318 aa19.11■□□□□ 0.65
NFIX-208ENST00000587260 ANXA1P04083 346 aa19.11■□□□□ 0.65
NFIX-208ENST00000587260 EN1Q05925 392 aaPredicted RBP19.11■□□□□ 0.65
NFIX-208ENST00000587260 TXNRD1Q16881 649 aa19.11■□□□□ 0.65
NFIX-208ENST00000587260 CCDC30Q5VVM6 783 aa19.11■□□□□ 0.65
NFIX-208ENST00000587260 LRRC4BQ9NT99 713 aa19.11■□□□□ 0.65
NFIX-208ENST00000587260 CACNA1FO60840 1977 aa19.11■□□□□ 0.65
NFIX-208ENST00000587260 CYP19A1P11511 503 aaPredicted RBP19.1■□□□□ 0.65
NFIX-208ENST00000587260 DEFB132Q7Z7B7 95 aa19.1■□□□□ 0.65
NFIX-208ENST00000587260 STK31Q9BXU1 1019 aa19.1■□□□□ 0.65
NFIX-208ENST00000587260 TEX13AQ9BXU3 409 aaPredicted RBP19.1■□□□□ 0.65
NFIX-208ENST00000587260 STARD3NLO95772 234 aa19.1■□□□□ 0.65
NFIX-208ENST00000587260 A1BGP04217 495 aa19.1■□□□□ 0.65
NFIX-208ENST00000587260 BAG6P46379 1132 aa19.1■□□□□ 0.65
NFIX-208ENST00000587260 PROSER3Q2NL68 480 aa19.1■□□□□ 0.65
NFIX-208ENST00000587260 MRPL50Q8N5N7 158 aaKnown RBP19.1■□□□□ 0.65
NFIX-208ENST00000587260 NEFLP07196 543 aa19.09■□□□□ 0.65
NFIX-208ENST00000587260 MYL6BP14649 208 aa19.09■□□□□ 0.65
NFIX-208ENST00000587260 EZH2Q15910 746 aaKnown RBP19.09■□□□□ 0.65
NFIX-208ENST00000587260 SLC27A3Q5K4L6 730 aa19.09■□□□□ 0.65
NFIX-208ENST00000587260 PROM2Q8N271 834 aa19.09■□□□□ 0.65
NFIX-208ENST00000587260 CRKLP46109 303 aaKnown RBP19.08■□□□□ 0.64
NFIX-208ENST00000587260 ZBTB1Q9Y2K1 713 aa19.08■□□□□ 0.64
NFIX-208ENST00000587260 TUBGCP6Q96RT7 1819 aa19.08■□□□□ 0.64
NFIX-208ENST00000587260 KIF16BQ96L93 1317 aa19.08■□□□□ 0.64
NFIX-208ENST00000587260 SLC4A2P04920 1241 aa19.07■□□□□ 0.64
NFIX-208ENST00000587260 CANXP27824 592 aaKnown RBP19.07■□□□□ 0.64
NFIX-208ENST00000587260 ARHGAP45Q92619 1136 aa19.07■□□□□ 0.64
NFIX-208ENST00000587260 DBF4Q9UBU7 674 aaPredicted RBP19.07■□□□□ 0.64
NFIX-208ENST00000587260 ZNF330Q9Y3S2 320 aaPredicted RBP19.07■□□□□ 0.64
NFIX-208ENST00000587260 UBR3Q6ZT12 1888 aa19.06■□□□□ 0.64
NFIX-208ENST00000587260 NBPF26B4DH59 902 aa19.06■□□□□ 0.64
NFIX-208ENST00000587260 PLIN1O60240 522 aa19.06■□□□□ 0.64
NFIX-208ENST00000587260 PDIA6Q15084 440 aa19.06■□□□□ 0.64
NFIX-208ENST00000587260 NBPF14Q5TI25 921 aa19.06■□□□□ 0.64
NFIX-208ENST00000587260 NBPF10Q6P3W6 841 aaKnown RBP19.06■□□□□ 0.64
NFIX-208ENST00000587260 NBPF15Q8N660 670 aa19.06■□□□□ 0.64
NFIX-208ENST00000587260 CAMKK2Q96RR4 588 aa19.06■□□□□ 0.64
NFIX-208ENST00000587260 CCDC87Q9NVE4 849 aa19.06■□□□□ 0.64
NFIX-208ENST00000587260 ERBB4Q15303 1308 aa19.06■□□□□ 0.64
NFIX-208ENST00000587260 PDE3AQ14432 1141 aa19.05■□□□□ 0.64
NFIX-208ENST00000587260 CCDC125Q86Z20 511 aa19.05■□□□□ 0.64
NFIX-208ENST00000587260 DDX21Q9NR30 783 aaKnown RBP eCLIP19.05■□□□□ 0.64
NFIX-208ENST00000587260 CNTNAP4Q9C0A0 1308 aa19.05■□□□□ 0.64
NFIX-208ENST00000587260 IPO8O15397 1037 aaKnown RBP19.05■□□□□ 0.64
NFIX-208ENST00000587260 C4AP0C0L4 1744 aa19.05■□□□□ 0.64
NFIX-208ENST00000587260 ERICH6BQ5W0A0 696 aa19.05■□□□□ 0.64
NFIX-208ENST00000587260 ZKSCAN2Q63HK3 967 aa19.05■□□□□ 0.64
NFIX-208ENST00000587260 INTS5Q6P9B9 1019 aaKnown RBP19.05■□□□□ 0.64
NFIX-208ENST00000587260 G2E3Q7L622 706 aa19.05■□□□□ 0.64
NFIX-208ENST00000587260 FRAT1Q92837 279 aaPredicted RBP19.05■□□□□ 0.64
NFIX-208ENST00000587260 PHAXQ9H814 394 aaKnown RBP19.05■□□□□ 0.64
NFIX-208ENST00000587260 GTF3C3Q9Y5Q9 886 aa19.05■□□□□ 0.64
NFIX-208ENST00000587260 NOB1Q9ULX3 412 aaKnown RBP19.04■□□□□ 0.64
NFIX-208ENST00000587260 ARFGEF2Q9Y6D5 1785 aa19.03■□□□□ 0.64
NFIX-208ENST00000587260 AK7Q96M32 723 aa19.03■□□□□ 0.64
NFIX-208ENST00000587260 GNPATO15228 680 aa19.02■□□□□ 0.64
NFIX-208ENST00000587260 MS4A1P11836 297 aa19.02■□□□□ 0.64
NFIX-208ENST00000587260 AIMP1Q12904 312 aaKnown RBP19.02■□□□□ 0.64
NFIX-208ENST00000587260 FKBP8Q14318 412 aa19.02■□□□□ 0.64
NFIX-208ENST00000587260 ATF7IPQ6VMQ6 1270 aa19.02■□□□□ 0.64
NFIX-208ENST00000587260 HYPKQ9NX55 129 aa19.02■□□□□ 0.64
NFIX-208ENST00000587260 BCORQ6W2J9 1755 aa19.01■□□□□ 0.63
NFIX-208ENST00000587260 FLIIQ13045 1269 aa19.01■□□□□ 0.63
NFIX-208ENST00000587260 SMIM5Q71RC9 77 aa19.01■□□□□ 0.63
NFIX-208ENST00000587260 LRP10Q7Z4F1 713 aa19.01■□□□□ 0.63
NFIX-208ENST00000587260 COL15A1P39059 1388 aa19.01■□□□□ 0.63
NFIX-208ENST00000587260 ZNF827Q17R98 1081 aa19■□□□□ 0.63
NFIX-208ENST00000587260 XAGE3Q8WTP9 111 aa19■□□□□ 0.63
NFIX-208ENST00000587260 SCN7AQ01118 1682 aa19■□□□□ 0.63
NFIX-208ENST00000587260 PTPRCP08575 1304 aa19■□□□□ 0.63
NFIX-208ENST00000587260 PHF14O94880 888 aa19■□□□□ 0.63
NFIX-208ENST00000587260 TRIM27P14373 513 aa19■□□□□ 0.63
NFIX-208ENST00000587260 IL6STP40189 918 aaPredicted RBP19■□□□□ 0.63
NFIX-208ENST00000587260 FKBP5Q13451 457 aaPredicted RBP19■□□□□ 0.63
NFIX-208ENST00000587260 RC3H1Q5TC82 1133 aaKnown RBP19■□□□□ 0.63
NFIX-208ENST00000587260 C20orf194Q5TEA3 1177 aa19■□□□□ 0.63
NFIX-208ENST00000587260 AMIGO3Q86WK7 504 aa19■□□□□ 0.63
NFIX-208ENST00000587260 ARXQ96QS3 562 aa19■□□□□ 0.63
NFIX-208ENST00000587260 IRX6P78412 446 aaPredicted RBP18.99■□□□□ 0.63
NFIX-208ENST00000587260 COPS6Q7L5N1 327 aa18.99■□□□□ 0.63
NFIX-208ENST00000587260 TNNQ9UQP3 1299 aa18.99■□□□□ 0.63
NFIX-208ENST00000587260 EIF5P55010 431 aaKnown RBP18.98■□□□□ 0.63
NFIX-208ENST00000587260 TTLL7Q6ZT98 887 aa18.98■□□□□ 0.63
NFIX-208ENST00000587260 NPM2Q86SE8 214 aaKnown RBP18.98■□□□□ 0.63
NFIX-208ENST00000587260 DZIP1LQ8IYY4 767 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms