RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 TEX13AQ9BXU3 409 aaPredicted RBP19.52■□□□□ 0.72
ATG4D-207ENST00000587256 RRP7AQ9Y3A4 280 aaKnown RBP19.52■□□□□ 0.72
ATG4D-207ENST00000587256 SOS1Q07889 1333 aaPredicted RBP19.51■□□□□ 0.71
ATG4D-207ENST00000587256 DCAF8L1A6NGE4 600 aa19.51■□□□□ 0.71
ATG4D-207ENST00000587256 TMPOP42166 694 aaKnown RBP19.51■□□□□ 0.71
ATG4D-207ENST00000587256 PNISRQ8TF01 805 aaKnown RBP19.51■□□□□ 0.71
ATG4D-207ENST00000587256 COL15A1P39059 1388 aa19.51■□□□□ 0.71
ATG4D-207ENST00000587256 CANXP27824 592 aaKnown RBP19.5■□□□□ 0.71
ATG4D-207ENST00000587256 NEUROD2Q15784 382 aa19.5■□□□□ 0.71
ATG4D-207ENST00000587256 USP42Q9H9J4 1324 aaKnown RBP19.5■□□□□ 0.71
ATG4D-207ENST00000587256 KDM3BQ7LBC6 1761 aa19.49■□□□□ 0.71
ATG4D-207ENST00000587256 NLGN1Q8N2Q7 840 aa19.49■□□□□ 0.71
ATG4D-207ENST00000587256 MIS18AQ9NYP9 233 aa19.49■□□□□ 0.71
ATG4D-207ENST00000587256 SRP68Q9UHB9 627 aaKnown RBP19.49■□□□□ 0.71
ATG4D-207ENST00000587256 MMP10P09238 476 aa19.48■□□□□ 0.71
ATG4D-207ENST00000587256 GYS1P13807 737 aa19.48■□□□□ 0.71
ATG4D-207ENST00000587256 ZNF330Q9Y3S2 320 aaPredicted RBP19.48■□□□□ 0.71
ATG4D-207ENST00000587256 ZPR1O75312 459 aa19.47■□□□□ 0.71
ATG4D-207ENST00000587256 SNRPA1P09661 255 aaKnown RBP19.47■□□□□ 0.71
ATG4D-207ENST00000587256 CCDC184Q52MB2 194 aa19.46■□□□□ 0.71
ATG4D-207ENST00000587256 MRS2Q9HD23 443 aa19.46■□□□□ 0.71
ATG4D-207ENST00000587256 LAMB4A4D0S4 1761 aa19.46■□□□□ 0.71
ATG4D-207ENST00000587256 NPM2Q86SE8 214 aaKnown RBP19.45■□□□□ 0.7
ATG4D-207ENST00000587256 NLGN2Q8NFZ4 835 aa19.45■□□□□ 0.7
ATG4D-207ENST00000587256 TSPYL4Q9UJ04 414 aa19.45■□□□□ 0.7
ATG4D-207ENST00000587256 PRAMEF22A3QJZ6 481 aa19.44■□□□□ 0.7
ATG4D-207ENST00000587256 USPL1Q5W0Q7 1092 aa19.44■□□□□ 0.7
ATG4D-207ENST00000587256 CD2APQ9Y5K6 639 aa19.44■□□□□ 0.7
ATG4D-207ENST00000587256 A0A087WZG4 1122 aa19.43■□□□□ 0.7
ATG4D-207ENST00000587256 IL6STP40189 918 aaPredicted RBP19.43■□□□□ 0.7
ATG4D-207ENST00000587256 FKBP8Q14318 412 aa19.43■□□□□ 0.7
ATG4D-207ENST00000587256 NARFQ9UHQ1 456 aa19.43■□□□□ 0.7
ATG4D-207ENST00000587256 USP16Q9Y5T5 823 aa19.43■□□□□ 0.7
ATG4D-207ENST00000587256 PARP3Q9Y6F1 533 aa19.43■□□□□ 0.7
ATG4D-207ENST00000587256 SCN7AQ01118 1682 aa19.43■□□□□ 0.7
ATG4D-207ENST00000587256 A1BGP04217 495 aa19.42■□□□□ 0.7
ATG4D-207ENST00000587256 EIF5P55010 431 aaKnown RBP19.42■□□□□ 0.7
ATG4D-207ENST00000587256 PELP1Q8IZL8 1130 aaKnown RBP19.42■□□□□ 0.7
ATG4D-207ENST00000587256 APAF1O14727 1248 aa19.41■□□□□ 0.7
ATG4D-207ENST00000587256 EIF4A1P60842 406 aaKnown RBP19.41■□□□□ 0.7
ATG4D-207ENST00000587256 TRIM35Q9UPQ4 493 aa19.41■□□□□ 0.7
ATG4D-207ENST00000587256 PIP4K2AP48426 406 aaPredicted RBP19.4■□□□□ 0.7
ATG4D-207ENST00000587256 C10orf71Q711Q0 1435 aa19.4■□□□□ 0.7
ATG4D-207ENST00000587256 GPR162Q16538 588 aa19.39■□□□□ 0.69
ATG4D-207ENST00000587256 BABAM1Q9NWV8 329 aa19.39■□□□□ 0.69
ATG4D-207ENST00000587256 LAS1LQ9Y4W2 734 aaKnown RBP19.39■□□□□ 0.69
ATG4D-207ENST00000587256 GIGYF1O75420 1035 aaPredicted RBP19.38■□□□□ 0.69
ATG4D-207ENST00000587256 DDR1Q08345 913 aa19.38■□□□□ 0.69
ATG4D-207ENST00000587256 TBC1D2BQ9UPU7 963 aa19.38■□□□□ 0.69
ATG4D-207ENST00000587256 BCORQ6W2J9 1755 aa19.37■□□□□ 0.69
ATG4D-207ENST00000587256 DZIP3Q86Y13 1208 aaKnown RBP19.36■□□□□ 0.69
ATG4D-207ENST00000587256 BCL2L12Q9HB09 334 aa19.36■□□□□ 0.69
ATG4D-207ENST00000587256 KIF13BQ9NQT8 1826 aa19.35■□□□□ 0.69
ATG4D-207ENST00000587256 NBPF26B4DH59 902 aa19.35■□□□□ 0.69
ATG4D-207ENST00000587256 POLRMTO00411 1230 aaKnown RBP19.35■□□□□ 0.69
ATG4D-207ENST00000587256 NFIXQ14938 502 aa19.35■□□□□ 0.69
ATG4D-207ENST00000587256 NBPF10Q6P3W6 841 aaKnown RBP19.35■□□□□ 0.69
ATG4D-207ENST00000587256 BICDL1Q6ZP65 573 aa19.35■□□□□ 0.69
ATG4D-207ENST00000587256 NBPF15Q8N660 670 aa19.35■□□□□ 0.69
ATG4D-207ENST00000587256 PXDNLA1KZ92 1463 aa19.35■□□□□ 0.69
ATG4D-207ENST00000587256 CALD1Q05682 793 aaKnown RBP19.34■□□□□ 0.69
ATG4D-207ENST00000587256 CHL1O00533 1208 aa19.33■□□□□ 0.68
ATG4D-207ENST00000587256 CAMTA2O94983 1202 aa19.33■□□□□ 0.68
ATG4D-207ENST00000587256 TM4SF1P30408 202 aa19.33■□□□□ 0.68
ATG4D-207ENST00000587256 WWC3Q9ULE0 1092 aa19.33■□□□□ 0.68
ATG4D-207ENST00000587256 KIAA1551Q9HCM1 1747 aa19.32■□□□□ 0.68
ATG4D-207ENST00000587256 SENP3-EIF4A1A0A087X0R7 540 aa19.32■□□□□ 0.68
ATG4D-207ENST00000587256 ERBB4Q15303 1308 aa19.31■□□□□ 0.68
ATG4D-207ENST00000587256 MYL6BP14649 208 aa19.31■□□□□ 0.68
ATG4D-207ENST00000587256 EIF2S2P20042 333 aaKnown RBP19.31■□□□□ 0.68
ATG4D-207ENST00000587256 TBC1D9BQ66K14 1250 aa19.31■□□□□ 0.68
ATG4D-207ENST00000587256 NGEFQ8N5V2 710 aa19.31■□□□□ 0.68
ATG4D-207ENST00000587256 CFAP44Q96MT7 982 aa19.31■□□□□ 0.68
ATG4D-207ENST00000587256 ZNF652Q9Y2D9 606 aa19.31■□□□□ 0.68
ATG4D-207ENST00000587256 CARMIL3Q8ND23 1372 aa19.31■□□□□ 0.68
ATG4D-207ENST00000587256 AFDNP55196 1824 aaKnown RBP19.3■□□□□ 0.68
ATG4D-207ENST00000587256 N4BP2Q86UW6 1770 aaPredicted RBP19.3■□□□□ 0.68
ATG4D-207ENST00000587256 SERPINB2P05120 415 aa19.3■□□□□ 0.68
ATG4D-207ENST00000587256 YBX3P16989 372 aaKnown RBP eCLIP19.3■□□□□ 0.68
ATG4D-207ENST00000587256 TGFB2P61812 414 aa19.3■□□□□ 0.68
ATG4D-207ENST00000587256 NRXN2Q9P2S2 1712 aa19.3■□□□□ 0.68
ATG4D-207ENST00000587256 GNAI1P63096 354 aa19.29■□□□□ 0.68
ATG4D-207ENST00000587256 KRT24Q2M2I5 525 aa19.29■□□□□ 0.68
ATG4D-207ENST00000587256 FAM9BQ8IZU0 186 aa19.29■□□□□ 0.68
ATG4D-207ENST00000587256 MBIPQ9NS73 344 aa19.29■□□□□ 0.68
ATG4D-207ENST00000587256 IFT57Q9NWB7 429 aa19.29■□□□□ 0.68
ATG4D-207ENST00000587256 A0A0G2JLW4 131 aa19.28■□□□□ 0.68
ATG4D-207ENST00000587256 NPHP1O15259 732 aa19.28■□□□□ 0.68
ATG4D-207ENST00000587256 GRIN3BO60391 1043 aa19.28■□□□□ 0.68
ATG4D-207ENST00000587256 YY1P25490 414 aa19.28■□□□□ 0.68
ATG4D-207ENST00000587256 KIF6Q6ZMV9 814 aa19.28■□□□□ 0.68
ATG4D-207ENST00000587256 DPEP1P16444 411 aa19.27■□□□□ 0.68
ATG4D-207ENST00000587256 NECTIN2Q92692 538 aa19.27■□□□□ 0.68
ATG4D-207ENST00000587256 SETDB2Q96T68 719 aa19.27■□□□□ 0.68
ATG4D-207ENST00000587256 CLEC4GQ6UXB4 293 aa19.26■□□□□ 0.67
ATG4D-207ENST00000587256 RGL2O15211 777 aa19.25■□□□□ 0.67
ATG4D-207ENST00000587256 HOXB7P09629 217 aa19.25■□□□□ 0.67
ATG4D-207ENST00000587256 ZNF853P0CG23 659 aa19.25■□□□□ 0.67
ATG4D-207ENST00000587256 CCDC27Q2M243 656 aa19.25■□□□□ 0.67
ATG4D-207ENST00000587256 HDGFL1Q5TGJ6 251 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms