RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.54□□□□□ -1.04
NPC1-206ENST00000587223 CHL1O00533 1208 aa8.54□□□□□ -1.04
NPC1-206ENST00000587223 ZBTB7AO95365 584 aa8.54□□□□□ -1.04
NPC1-206ENST00000587223 SSFA2P28290 1259 aa8.54□□□□□ -1.04
NPC1-206ENST00000587223 EIF4A1P60842 406 aaKnown RBP8.54□□□□□ -1.04
NPC1-206ENST00000587223 CCDC27Q2M243 656 aa8.54□□□□□ -1.04
NPC1-206ENST00000587223 INTS5Q6P9B9 1019 aaKnown RBP8.54□□□□□ -1.04
NPC1-206ENST00000587223 SMIM5Q71RC9 77 aa8.54□□□□□ -1.04
NPC1-206ENST00000587223 WWC1Q8IX03 1113 aa8.54□□□□□ -1.04
NPC1-206ENST00000587223 SLC16A10Q8TF71 515 aa8.54□□□□□ -1.04
NPC1-206ENST00000587223 CFAP44Q96MT7 982 aa8.54□□□□□ -1.04
NPC1-206ENST00000587223 SPON1Q9HCB6 807 aa8.54□□□□□ -1.04
NPC1-206ENST00000587223 CCDC87Q9NVE4 849 aa8.54□□□□□ -1.04
NPC1-206ENST00000587223 SIPA1L3O60292 1781 aaPredicted RBP8.53□□□□□ -1.04
NPC1-206ENST00000587223 TAF1LQ8IZX4 1826 aa8.53□□□□□ -1.04
NPC1-206ENST00000587223 CANXP27824 592 aaKnown RBP8.53□□□□□ -1.04
NPC1-206ENST00000587223 RFC4P35249 363 aa8.53□□□□□ -1.04
NPC1-206ENST00000587223 GNAI1P63096 354 aa8.53□□□□□ -1.04
NPC1-206ENST00000587223 NPM2Q86SE8 214 aaKnown RBP8.53□□□□□ -1.04
NPC1-206ENST00000587223 NGEFQ8N5V2 710 aa8.53□□□□□ -1.04
NPC1-206ENST00000587223 ARHGEF1Q92888 912 aaKnown RBP8.53□□□□□ -1.04
NPC1-206ENST00000587223 USP16Q9Y5T5 823 aa8.53□□□□□ -1.04
NPC1-206ENST00000587223 KCPQ6ZWJ8 1503 aa8.53□□□□□ -1.04
NPC1-206ENST00000587223 C5P01031 1676 aa8.53□□□□□ -1.04
NPC1-206ENST00000587223 C4BP0C0L5 1744 aa8.52□□□□□ -1.05
NPC1-206ENST00000587223 PAPPAQ13219 1627 aa8.52□□□□□ -1.05
NPC1-206ENST00000587223 PRAMEF22A3QJZ6 481 aa8.52□□□□□ -1.05
NPC1-206ENST00000587223 GIGYF1O75420 1035 aaPredicted RBP8.52□□□□□ -1.05
NPC1-206ENST00000587223 A1BGP04217 495 aa8.52□□□□□ -1.05
NPC1-206ENST00000587223 AMIGO3Q86WK7 504 aa8.52□□□□□ -1.05
NPC1-206ENST00000587223 ARXQ96QS3 562 aa8.52□□□□□ -1.05
NPC1-206ENST00000587223 MTFR1LQ9H019 292 aa8.52□□□□□ -1.05
NPC1-206ENST00000587223 IFT57Q9NWB7 429 aa8.52□□□□□ -1.05
NPC1-206ENST00000587223 ZNF831Q5JPB2 1677 aa8.52□□□□□ -1.05
NPC1-206ENST00000587223 ZNF853P0CG23 659 aa8.51□□□□□ -1.05
NPC1-206ENST00000587223 EIF2S2P20042 333 aaKnown RBP8.51□□□□□ -1.05
NPC1-206ENST00000587223 POLD1P28340 1107 aa8.51□□□□□ -1.05
NPC1-206ENST00000587223 WDR63Q8IWG1 891 aa8.51□□□□□ -1.05
NPC1-206ENST00000587223 MBIPQ9NS73 344 aa8.51□□□□□ -1.05
NPC1-206ENST00000587223 PPP1R1BQ9UD71 204 aaPredicted RBP8.51□□□□□ -1.05
NPC1-206ENST00000587223 ZBTB1Q9Y2K1 713 aa8.51□□□□□ -1.05
NPC1-206ENST00000587223 ZNF330Q9Y3S2 320 aaPredicted RBP8.51□□□□□ -1.05
NPC1-206ENST00000587223 MYH14Q7Z406 1995 aaKnown RBP8.5□□□□□ -1.05
NPC1-206ENST00000587223 A0A087WZG4 1122 aa8.5□□□□□ -1.05
NPC1-206ENST00000587223 ZPR1O75312 459 aa8.5□□□□□ -1.05
NPC1-206ENST00000587223 IL6STP40189 918 aaPredicted RBP8.5□□□□□ -1.05
NPC1-206ENST00000587223 MSL1Q68DK7 614 aa8.5□□□□□ -1.05
NPC1-206ENST00000587223 NLGN1Q8N2Q7 840 aa8.5□□□□□ -1.05
NPC1-206ENST00000587223 UBR2Q8IWV8 1755 aa8.5□□□□□ -1.05
NPC1-206ENST00000587223 SOS1Q07889 1333 aaPredicted RBP8.5□□□□□ -1.05
NPC1-206ENST00000587223 IL16Q14005 1332 aa8.5□□□□□ -1.05
NPC1-206ENST00000587223 ELL2O00472 640 aaPredicted RBP8.49□□□□□ -1.05
NPC1-206ENST00000587223 PIP4K2AP48426 406 aaPredicted RBP8.49□□□□□ -1.05
NPC1-206ENST00000587223 EIF5P55010 431 aaKnown RBP8.49□□□□□ -1.05
NPC1-206ENST00000587223 KRT24Q2M2I5 525 aa8.49□□□□□ -1.05
NPC1-206ENST00000587223 DUSP27Q5VZP5 1158 aa8.49□□□□□ -1.05
NPC1-206ENST00000587223 UBR3Q6ZT12 1888 aa8.49□□□□□ -1.05
NPC1-206ENST00000587223 COL5A3P25940 1745 aaPredicted RBP8.49□□□□□ -1.05
NPC1-206ENST00000587223 TJP1Q07157 1748 aa8.49□□□□□ -1.05
NPC1-206ENST00000587223 NBPF26B4DH59 902 aa8.48□□□□□ -1.05
NPC1-206ENST00000587223 MYL6BP14649 208 aa8.48□□□□□ -1.05
NPC1-206ENST00000587223 PTGER2P43116 358 aa8.48□□□□□ -1.05
NPC1-206ENST00000587223 GOLGA2Q08379 1002 aa8.48□□□□□ -1.05
NPC1-206ENST00000587223 NBPF10Q6P3W6 841 aaKnown RBP8.48□□□□□ -1.05
NPC1-206ENST00000587223 NBPF15Q8N660 670 aa8.48□□□□□ -1.05
NPC1-206ENST00000587223 NECTIN2Q92692 538 aa8.48□□□□□ -1.05
NPC1-206ENST00000587223 TSR2Q969E8 191 aaKnown RBP8.48□□□□□ -1.05
NPC1-206ENST00000587223 SRP68Q9UHB9 627 aaKnown RBP8.48□□□□□ -1.05
NPC1-206ENST00000587223 NARFQ9UHQ1 456 aa8.48□□□□□ -1.05
NPC1-206ENST00000587223 TBC1D2BQ9UPU7 963 aa8.48□□□□□ -1.05
NPC1-206ENST00000587223 QSER1Q2KHR3 1735 aa8.48□□□□□ -1.05
NPC1-206ENST00000587223 KDM3BQ7LBC6 1761 aa8.48□□□□□ -1.05
NPC1-206ENST00000587223 CASZ1Q86V15 1759 aa8.48□□□□□ -1.05
NPC1-206ENST00000587223 TUBGCP6Q96RT7 1819 aa8.47□□□□□ -1.05
NPC1-206ENST00000587223 SPDYE4A6NLX3 237 aa8.47□□□□□ -1.05
NPC1-206ENST00000587223 HOXB7P09629 217 aa8.47□□□□□ -1.05
NPC1-206ENST00000587223 GYS1P13807 737 aa8.47□□□□□ -1.05
NPC1-206ENST00000587223 USPL1Q5W0Q7 1092 aa8.47□□□□□ -1.05
NPC1-206ENST00000587223 DZIP3Q86Y13 1208 aaKnown RBP8.47□□□□□ -1.05
NPC1-206ENST00000587223 C8orf58Q8NAV2 365 aa8.47□□□□□ -1.05
NPC1-206ENST00000587223 CHMP4AQ9BY43 222 aa8.47□□□□□ -1.05
NPC1-206ENST00000587223 MYH16Q9H6N6 1097 aa8.47□□□□□ -1.05
NPC1-206ENST00000587223 COL15A1P39059 1388 aa8.47□□□□□ -1.05
NPC1-206ENST00000587223 MMP10P09238 476 aa8.46□□□□□ -1.06
NPC1-206ENST00000587223 MKRN4PQ13434 485 aaPredicted RBP8.46□□□□□ -1.06
NPC1-206ENST00000587223 HDGFL1Q5TGJ6 251 aa8.46□□□□□ -1.06
NPC1-206ENST00000587223 KLHL34Q8N239 644 aa8.46□□□□□ -1.06
NPC1-206ENST00000587223 SGIP1Q9BQI5 828 aa8.46□□□□□ -1.06
NPC1-206ENST00000587223 SPINK5Q9NQ38 1064 aaPredicted RBP8.46□□□□□ -1.06
NPC1-206ENST00000587223 PARP3Q9Y6F1 533 aa8.46□□□□□ -1.06
NPC1-206ENST00000587223 ERBB4Q15303 1308 aa8.46□□□□□ -1.06
NPC1-206ENST00000587223 USP42Q9H9J4 1324 aaKnown RBP8.46□□□□□ -1.06
NPC1-206ENST00000587223 CICQ96RK0 1608 aaPredicted RBP8.46□□□□□ -1.06
NPC1-206ENST00000587223 ANXA1P04083 346 aa8.45□□□□□ -1.06
NPC1-206ENST00000587223 HNRNPUQ00839 825 aaKnown RBP eCLIP8.45□□□□□ -1.06
NPC1-206ENST00000587223 EXOSC9Q06265 439 aaKnown RBP8.45□□□□□ -1.06
NPC1-206ENST00000587223 PDIA6Q15084 440 aa8.45□□□□□ -1.06
NPC1-206ENST00000587223 TWISTNBQ3B726 338 aaPredicted RBP8.45□□□□□ -1.06
NPC1-206ENST00000587223 CCDC30Q5VVM6 783 aa8.45□□□□□ -1.06
NPC1-206ENST00000587223 BICDL1Q6ZP65 573 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms