RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 GYS1P13807 737 aa26.74■■□□□ 1.87
VAT1-203ENST00000587062 DCTN1Q14203 1278 aa26.73■■□□□ 1.87
VAT1-203ENST00000587062 USP42Q9H9J4 1324 aaKnown RBP26.72■■□□□ 1.87
VAT1-203ENST00000587062 CANXP27824 592 aaKnown RBP26.72■■□□□ 1.87
VAT1-203ENST00000587062 LMOD3Q0VAK6 560 aa26.72■■□□□ 1.87
VAT1-203ENST00000587062 SOS1Q07889 1333 aaPredicted RBP26.71■■□□□ 1.87
VAT1-203ENST00000587062 YY1P25490 414 aa26.71■■□□□ 1.87
VAT1-203ENST00000587062 NLGN2Q8NFZ4 835 aa26.71■■□□□ 1.87
VAT1-203ENST00000587062 GRIN3BO60391 1043 aa26.7■■□□□ 1.86
VAT1-203ENST00000587062 SNRPA1P09661 255 aaKnown RBP26.7■■□□□ 1.86
VAT1-203ENST00000587062 ZBTB1Q9Y2K1 713 aa26.7■■□□□ 1.86
VAT1-203ENST00000587062 NARFQ9UHQ1 456 aa26.69■■□□□ 1.86
VAT1-203ENST00000587062 COL15A1P39059 1388 aa26.69■■□□□ 1.86
VAT1-203ENST00000587062 RIPK4P57078 832 aa26.68■■□□□ 1.86
VAT1-203ENST00000587062 SRP68Q9UHB9 627 aaKnown RBP26.67■■□□□ 1.86
VAT1-203ENST00000587062 C4AP0C0L4 1744 aa26.67■■□□□ 1.86
VAT1-203ENST00000587062 IL6STP40189 918 aaPredicted RBP26.66■■□□□ 1.86
VAT1-203ENST00000587062 USPL1Q5W0Q7 1092 aa26.66■■□□□ 1.86
VAT1-203ENST00000587062 RUNDC1Q96C34 613 aa26.66■■□□□ 1.86
VAT1-203ENST00000587062 DLG5Q8TDM6 1919 aa26.66■■□□□ 1.86
VAT1-203ENST00000587062 KCNQ3O43525 872 aa26.65■■□□□ 1.86
VAT1-203ENST00000587062 TGFB2P61812 414 aa26.65■■□□□ 1.86
VAT1-203ENST00000587062 ZNF330Q9Y3S2 320 aaPredicted RBP26.65■■□□□ 1.86
VAT1-203ENST00000587062 EIF5P55010 431 aaKnown RBP26.64■■□□□ 1.86
VAT1-203ENST00000587062 FKBP8Q14318 412 aa26.64■■□□□ 1.86
VAT1-203ENST00000587062 TMPOP42166 694 aaKnown RBP26.63■■□□□ 1.85
VAT1-203ENST00000587062 A1BGP04217 495 aa26.61■■□□□ 1.85
VAT1-203ENST00000587062 USP16Q9Y5T5 823 aa26.61■■□□□ 1.85
VAT1-203ENST00000587062 BABAM1Q9NWV8 329 aa26.6■■□□□ 1.85
VAT1-203ENST00000587062 MIS18AQ9NYP9 233 aa26.6■■□□□ 1.85
VAT1-203ENST00000587062 ADAMTS8Q9UP79 889 aa26.6■■□□□ 1.85
VAT1-203ENST00000587062 ANP32CO43423 234 aa26.59■■□□□ 1.85
VAT1-203ENST00000587062 TM4SF1P30408 202 aa26.59■■□□□ 1.85
VAT1-203ENST00000587062 CCDC146Q8IYE0 955 aa26.59■■□□□ 1.85
VAT1-203ENST00000587062 NEUROD2Q15784 382 aa26.58■■□□□ 1.85
VAT1-203ENST00000587062 THUMPD2Q9BTF0 503 aaKnown RBP26.57■■□□□ 1.84
VAT1-203ENST00000587062 TSPYL4Q9UJ04 414 aa26.57■■□□□ 1.84
VAT1-203ENST00000587062 CHD4Q14839 1912 aa26.57■■□□□ 1.84
VAT1-203ENST00000587062 TBC1D2BQ9UPU7 963 aa26.56■■□□□ 1.84
VAT1-203ENST00000587062 POLRMTO00411 1230 aaKnown RBP26.55■■□□□ 1.84
VAT1-203ENST00000587062 DZIP3Q86Y13 1208 aaKnown RBP26.55■■□□□ 1.84
VAT1-203ENST00000587062 C10orf71Q711Q0 1435 aa26.55■■□□□ 1.84
VAT1-203ENST00000587062 YBX3P16989 372 aaKnown RBP eCLIP26.54■■□□□ 1.846e-13■□□□□ 8.2
VAT1-203ENST00000587062 EIF4A1P60842 406 aaKnown RBP26.54■■□□□ 1.84
VAT1-203ENST00000587062 NFIXQ14938 502 aa26.54■■□□□ 1.84
VAT1-203ENST00000587062 ZNF652Q9Y2D9 606 aa26.54■■□□□ 1.84
VAT1-203ENST00000587062 DDR1Q08345 913 aa26.53■■□□□ 1.84
VAT1-203ENST00000587062 RRP7AQ9Y3A4 280 aaKnown RBP26.53■■□□□ 1.84
VAT1-203ENST00000587062 KIF13BQ9NQT8 1826 aa26.53■■□□□ 1.84
VAT1-203ENST00000587062 GIGYF1O75420 1035 aaPredicted RBP26.52■■□□□ 1.84
VAT1-203ENST00000587062 SERPINB2P05120 415 aa26.52■■□□□ 1.84
VAT1-203ENST00000587062 A0A0G2JLW4 131 aa26.51■■□□□ 1.83
VAT1-203ENST00000587062 PRAMEF22A3QJZ6 481 aa26.51■■□□□ 1.83
VAT1-203ENST00000587062 NPHP1O15259 732 aa26.51■■□□□ 1.83
VAT1-203ENST00000587062 BICDL1Q6ZP65 573 aa26.51■■□□□ 1.83
VAT1-203ENST00000587062 BCL2L12Q9HB09 334 aa26.51■■□□□ 1.83
VAT1-203ENST00000587062 CLEC4GQ6UXB4 293 aa26.5■■□□□ 1.83
VAT1-203ENST00000587062 SETDB2Q96T68 719 aa26.5■■□□□ 1.83
VAT1-203ENST00000587062 KDM3BQ7LBC6 1761 aa26.5■■□□□ 1.83
VAT1-203ENST00000587062 CALD1Q05682 793 aaKnown RBP26.49■■□□□ 1.83
VAT1-203ENST00000587062 PIM2Q9P1W9 311 aa26.49■■□□□ 1.83
VAT1-203ENST00000587062 PXDNLA1KZ92 1463 aa26.49■■□□□ 1.83
VAT1-203ENST00000587062 RGL2O15211 777 aa26.48■■□□□ 1.83
VAT1-203ENST00000587062 DPEP1P16444 411 aa26.48■■□□□ 1.83
VAT1-203ENST00000587062 BCS1LQ9Y276 419 aa26.48■■□□□ 1.83
VAT1-203ENST00000587062 CAMTA2O94983 1202 aa26.47■■□□□ 1.83
VAT1-203ENST00000587062 PIP4K2AP48426 406 aaPredicted RBP26.47■■□□□ 1.83
VAT1-203ENST00000587062 TBC1D9BQ66K14 1250 aa26.47■■□□□ 1.83
VAT1-203ENST00000587062 WWC3Q9ULE0 1092 aa26.47■■□□□ 1.83
VAT1-203ENST00000587062 LAS1LQ9Y4W2 734 aaKnown RBP26.47■■□□□ 1.83
VAT1-203ENST00000587062 CARMIL3Q8ND23 1372 aa26.46■■□□□ 1.83
VAT1-203ENST00000587062 PDZRN3Q9UPQ7 1066 aa26.46■■□□□ 1.83
VAT1-203ENST00000587062 ERBB4Q15303 1308 aa26.45■■□□□ 1.83
VAT1-203ENST00000587062 LAMB4A4D0S4 1761 aa26.45■■□□□ 1.82
VAT1-203ENST00000587062 N4BP2Q86UW6 1770 aaPredicted RBP26.44■■□□□ 1.82
VAT1-203ENST00000587062 TRIM35Q9UPQ4 493 aa26.44■■□□□ 1.82
VAT1-203ENST00000587062 NBPF26B4DH59 902 aa26.43■■□□□ 1.82
VAT1-203ENST00000587062 APAF1O14727 1248 aa26.43■■□□□ 1.82
VAT1-203ENST00000587062 DALRD3Q5D0E6 543 aaKnown RBP26.43■■□□□ 1.82
VAT1-203ENST00000587062 NBPF10Q6P3W6 841 aaKnown RBP26.43■■□□□ 1.82
VAT1-203ENST00000587062 KIF6Q6ZMV9 814 aa26.43■■□□□ 1.82
VAT1-203ENST00000587062 NBPF15Q8N660 670 aa26.43■■□□□ 1.82
VAT1-203ENST00000587062 MRS2Q9HD23 443 aa26.43■■□□□ 1.82
VAT1-203ENST00000587062 SCN7AQ01118 1682 aa26.43■■□□□ 1.82
VAT1-203ENST00000587062 H0YIN7 160 aa26.42■■□□□ 1.82
VAT1-203ENST00000587062 CHL1O00533 1208 aa26.42■■□□□ 1.82
VAT1-203ENST00000587062 PDE6BP35913 854 aa26.42■■□□□ 1.82
VAT1-203ENST00000587062 ST5P78524 1137 aa26.42■■□□□ 1.82
VAT1-203ENST00000587062 EIF2S2P20042 333 aaKnown RBP26.41■■□□□ 1.82
VAT1-203ENST00000587062 NGEFQ8N5V2 710 aa26.41■■□□□ 1.82
VAT1-203ENST00000587062 AFDNP55196 1824 aaKnown RBP26.4■■□□□ 1.82
VAT1-203ENST00000587062 MYL6BP14649 208 aa26.4■■□□□ 1.82
VAT1-203ENST00000587062 CNBD1Q8NA66 436 aa26.4■■□□□ 1.82
VAT1-203ENST00000587062 CFAP44Q96MT7 982 aa26.4■■□□□ 1.82
VAT1-203ENST00000587062 ERVV-1B6SEH8 477 aa26.39■■□□□ 1.82
VAT1-203ENST00000587062 KCNA3P22001 575 aa26.39■■□□□ 1.82
VAT1-203ENST00000587062 ZNF784Q8NCA9 323 aaPredicted RBP26.39■■□□□ 1.82
VAT1-203ENST00000587062 BRIP1Q9BX63 1249 aa26.39■■□□□ 1.82
VAT1-203ENST00000587062 NRXN2Q9P2S2 1712 aa26.39■■□□□ 1.81
VAT1-203ENST00000587062 CHRNA5P30532 468 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms