RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 THUMPD2Q9BTF0 503 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-210ENST00000586892 SOS1Q07889 1333 aaPredicted RBP17.48■□□□□ 0.39
SMARCA4-210ENST00000586892 CCDC184Q52MB2 194 aa17.48■□□□□ 0.39
SMARCA4-210ENST00000586892 SYT17Q9BSW7 474 aa17.48■□□□□ 0.39
SMARCA4-210ENST00000586892 ZBTB1Q9Y2K1 713 aa17.48■□□□□ 0.39
SMARCA4-210ENST00000586892 UTRNP46939 3433 aa17.47■□□□□ 0.39
SMARCA4-210ENST00000586892 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-210ENST00000586892 NEUROD2Q15784 382 aa17.47■□□□□ 0.39
SMARCA4-210ENST00000586892 NLGN1Q8N2Q7 840 aa17.47■□□□□ 0.39
SMARCA4-210ENST00000586892 MRS2Q9HD23 443 aa17.47■□□□□ 0.39
SMARCA4-210ENST00000586892 RRP7AQ9Y3A4 280 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-210ENST00000586892 GOLGB1Q14789 3259 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-210ENST00000586892 COL15A1P39059 1388 aa17.46■□□□□ 0.39
SMARCA4-210ENST00000586892 MIS18AQ9NYP9 233 aa17.46■□□□□ 0.39
SMARCA4-210ENST00000586892 USP42Q9H9J4 1324 aaKnown RBP17.46■□□□□ 0.38
SMARCA4-210ENST00000586892 GYS1P13807 737 aa17.45■□□□□ 0.38
SMARCA4-210ENST00000586892 BABAM1Q9NWV8 329 aa17.45■□□□□ 0.38
SMARCA4-210ENST00000586892 LAMB4A4D0S4 1761 aa17.45■□□□□ 0.38
SMARCA4-210ENST00000586892 ZPR1O75312 459 aa17.44■□□□□ 0.38
SMARCA4-210ENST00000586892 CANXP27824 592 aaKnown RBP17.44■□□□□ 0.38
SMARCA4-210ENST00000586892 TRIM35Q9UPQ4 493 aa17.44■□□□□ 0.38
SMARCA4-210ENST00000586892 APAF1O14727 1248 aa17.43■□□□□ 0.38
SMARCA4-210ENST00000586892 MMP10P09238 476 aa17.43■□□□□ 0.38
SMARCA4-210ENST00000586892 IL6STP40189 918 aaPredicted RBP17.43■□□□□ 0.38
SMARCA4-210ENST00000586892 EIF5P55010 431 aaKnown RBP17.43■□□□□ 0.38
SMARCA4-210ENST00000586892 KLHL34Q8N239 644 aa17.43■□□□□ 0.38
SMARCA4-210ENST00000586892 SRP68Q9UHB9 627 aaKnown RBP17.43■□□□□ 0.38
SMARCA4-210ENST00000586892 TSPYL4Q9UJ04 414 aa17.43■□□□□ 0.38
SMARCA4-210ENST00000586892 USP16Q9Y5T5 823 aa17.43■□□□□ 0.38
SMARCA4-210ENST00000586892 A0A087WZG4 1122 aa17.42■□□□□ 0.38
SMARCA4-210ENST00000586892 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
SMARCA4-210ENST00000586892 EIF4A1P60842 406 aaKnown RBP17.42■□□□□ 0.38
SMARCA4-210ENST00000586892 NARFQ9UHQ1 456 aa17.42■□□□□ 0.38
SMARCA4-210ENST00000586892 PRAMEF22A3QJZ6 481 aa17.41■□□□□ 0.38
SMARCA4-210ENST00000586892 A1BGP04217 495 aa17.41■□□□□ 0.38
SMARCA4-210ENST00000586892 NPM2Q86SE8 214 aaKnown RBP17.41■□□□□ 0.38
SMARCA4-210ENST00000586892 CD2APQ9Y5K6 639 aa17.41■□□□□ 0.38
SMARCA4-210ENST00000586892 GIGYF1O75420 1035 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-210ENST00000586892 USPL1Q5W0Q7 1092 aa17.4■□□□□ 0.38
SMARCA4-210ENST00000586892 FKBP8Q14318 412 aa17.39■□□□□ 0.37
SMARCA4-210ENST00000586892 ZNF330Q9Y3S2 320 aaPredicted RBP17.39■□□□□ 0.37
SMARCA4-210ENST00000586892 PARP3Q9Y6F1 533 aa17.39■□□□□ 0.37
SMARCA4-210ENST00000586892 SCN7AQ01118 1682 aa17.39■□□□□ 0.37
SMARCA4-210ENST00000586892 KIF13BQ9NQT8 1826 aa17.38■□□□□ 0.37
SMARCA4-210ENST00000586892 CHL1O00533 1208 aa17.38■□□□□ 0.37
SMARCA4-210ENST00000586892 CALD1Q05682 793 aaKnown RBP17.38■□□□□ 0.37
SMARCA4-210ENST00000586892 NLGN2Q8NFZ4 835 aa17.37■□□□□ 0.37
SMARCA4-210ENST00000586892 BCORQ6W2J9 1755 aa17.36■□□□□ 0.37
SMARCA4-210ENST00000586892 TM4SF1P30408 202 aa17.36■□□□□ 0.37
SMARCA4-210ENST00000586892 CFAP44Q96MT7 982 aa17.36■□□□□ 0.37
SMARCA4-210ENST00000586892 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
SMARCA4-210ENST00000586892 NBPF26B4DH59 902 aa17.35■□□□□ 0.37
SMARCA4-210ENST00000586892 PIP4K2AP48426 406 aaPredicted RBP17.35■□□□□ 0.37
SMARCA4-210ENST00000586892 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-210ENST00000586892 NBPF10Q6P3W6 841 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-210ENST00000586892 DZIP3Q86Y13 1208 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-210ENST00000586892 NBPF15Q8N660 670 aa17.35■□□□□ 0.37
SMARCA4-210ENST00000586892 BCL2L12Q9HB09 334 aa17.35■□□□□ 0.37
SMARCA4-210ENST00000586892 TBC1D2BQ9UPU7 963 aa17.35■□□□□ 0.37
SMARCA4-210ENST00000586892 C10orf71Q711Q0 1435 aa17.35■□□□□ 0.37
SMARCA4-210ENST00000586892 DDR1Q08345 913 aa17.34■□□□□ 0.37
SMARCA4-210ENST00000586892 ERBB4Q15303 1308 aa17.34■□□□□ 0.37
SMARCA4-210ENST00000586892 CCDC27Q2M243 656 aa17.34■□□□□ 0.37
SMARCA4-210ENST00000586892 IFT57Q9NWB7 429 aa17.34■□□□□ 0.37
SMARCA4-210ENST00000586892 POLRMTO00411 1230 aaKnown RBP17.33■□□□□ 0.36
SMARCA4-210ENST00000586892 CAMTA2O94983 1202 aa17.33■□□□□ 0.36
SMARCA4-210ENST00000586892 NFIXQ14938 502 aa17.33■□□□□ 0.36
SMARCA4-210ENST00000586892 AFDNP55196 1824 aaKnown RBP17.33■□□□□ 0.36
SMARCA4-210ENST00000586892 RGL2O15211 777 aa17.32■□□□□ 0.36
SMARCA4-210ENST00000586892 ZNF853P0CG23 659 aa17.32■□□□□ 0.36
SMARCA4-210ENST00000586892 GNAI1P63096 354 aa17.32■□□□□ 0.36
SMARCA4-210ENST00000586892 NRXN2Q9P2S2 1712 aa17.32■□□□□ 0.36
SMARCA4-210ENST00000586892 TGFB2P61812 414 aa17.31■□□□□ 0.36
SMARCA4-210ENST00000586892 GPR162Q16538 588 aa17.31■□□□□ 0.36
SMARCA4-210ENST00000586892 CLEC4GQ6UXB4 293 aa17.31■□□□□ 0.36
SMARCA4-210ENST00000586892 FAM9BQ8IZU0 186 aa17.31■□□□□ 0.36
SMARCA4-210ENST00000586892 MBIPQ9NS73 344 aa17.31■□□□□ 0.36
SMARCA4-210ENST00000586892 ZNF652Q9Y2D9 606 aa17.31■□□□□ 0.36
SMARCA4-210ENST00000586892 KIAA1551Q9HCM1 1747 aa17.3■□□□□ 0.36
SMARCA4-210ENST00000586892 HOXB7P09629 217 aa17.3■□□□□ 0.36
SMARCA4-210ENST00000586892 TBC1D9BQ66K14 1250 aa17.3■□□□□ 0.36
SMARCA4-210ENST00000586892 WWC1Q8IX03 1113 aa17.3■□□□□ 0.36
SMARCA4-210ENST00000586892 PXDNLA1KZ92 1463 aa17.3■□□□□ 0.36
SMARCA4-210ENST00000586892 CARMIL3Q8ND23 1372 aa17.29■□□□□ 0.36
SMARCA4-210ENST00000586892 SERPINB2P05120 415 aa17.29■□□□□ 0.36
SMARCA4-210ENST00000586892 MYL6BP14649 208 aa17.29■□□□□ 0.36
SMARCA4-210ENST00000586892 EIF2S2P20042 333 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-210ENST00000586892 BICDL1Q6ZP65 573 aa17.29■□□□□ 0.36
SMARCA4-210ENST00000586892 N4BP2Q86UW6 1770 aaPredicted RBP17.29■□□□□ 0.36
SMARCA4-210ENST00000586892 KRT24Q2M2I5 525 aa17.28■□□□□ 0.36
SMARCA4-210ENST00000586892 PELP1Q8IZL8 1130 aaKnown RBP17.28■□□□□ 0.36
SMARCA4-210ENST00000586892 SETDB2Q96T68 719 aa17.28■□□□□ 0.36
SMARCA4-210ENST00000586892 PDIA6Q15084 440 aa17.27■□□□□ 0.36
SMARCA4-210ENST00000586892 KIF6Q6ZMV9 814 aa17.27■□□□□ 0.36
SMARCA4-210ENST00000586892 NGEFQ8N5V2 710 aa17.27■□□□□ 0.36
SMARCA4-210ENST00000586892 CHD4Q14839 1912 aa17.27■□□□□ 0.35
SMARCA4-210ENST00000586892 NUP98P52948 1817 aa17.26■□□□□ 0.35
SMARCA4-210ENST00000586892 IL16Q14005 1332 aa17.26■□□□□ 0.35
SMARCA4-210ENST00000586892 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
SMARCA4-210ENST00000586892 ERVV-1B6SEH8 477 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms