RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 C5P01031 1676 aa17.55■□□□□ 0.4
VMP1-203ENST00000586245 RREB1Q92766 1687 aa17.55■□□□□ 0.4
VMP1-203ENST00000586245 SOCS7O14512 581 aa17.55■□□□□ 0.4
VMP1-203ENST00000586245 CRKLP46109 303 aaKnown RBP17.55■□□□□ 0.4
VMP1-203ENST00000586245 AK7Q96M32 723 aa17.55■□□□□ 0.4
VMP1-203ENST00000586245 CCDC87Q9NVE4 849 aa17.55■□□□□ 0.4
VMP1-203ENST00000586245 CNTNAP4Q9C0A0 1308 aa17.54■□□□□ 0.4
VMP1-203ENST00000586245 LAMB4A4D0S4 1761 aa17.54■□□□□ 0.4
VMP1-203ENST00000586245 VAMP4O75379 141 aa17.54■□□□□ 0.4
VMP1-203ENST00000586245 CT47B1P0C2W7 299 aaPredicted RBP17.54■□□□□ 0.4
VMP1-203ENST00000586245 RC3H1Q5TC82 1133 aaKnown RBP17.54■□□□□ 0.4
VMP1-203ENST00000586245 CCDC30Q5VVM6 783 aa17.54■□□□□ 0.4
VMP1-203ENST00000586245 NECTIN2Q92692 538 aa17.54■□□□□ 0.4
VMP1-203ENST00000586245 COL5A3P25940 1745 aaPredicted RBP17.53■□□□□ 0.4
VMP1-203ENST00000586245 A1BGP04217 495 aa17.53■□□□□ 0.4
VMP1-203ENST00000586245 NBPF14Q5TI25 921 aa17.53■□□□□ 0.4
VMP1-203ENST00000586245 STK32BQ9NY57 414 aa17.53■□□□□ 0.4
VMP1-203ENST00000586245 TAF1LQ8IZX4 1826 aa17.53■□□□□ 0.4
VMP1-203ENST00000586245 C4BP0C0L5 1744 aa17.52■□□□□ 0.4
VMP1-203ENST00000586245 NUP188Q5SRE5 1749 aa17.52■□□□□ 0.4
VMP1-203ENST00000586245 ERBB4Q15303 1308 aa17.52■□□□□ 0.4
VMP1-203ENST00000586245 INTS5Q6P9B9 1019 aaKnown RBP17.52■□□□□ 0.4
VMP1-203ENST00000586245 GNPATO15228 680 aa17.51■□□□□ 0.39
VMP1-203ENST00000586245 CANXP27824 592 aaKnown RBP17.51■□□□□ 0.39
VMP1-203ENST00000586245 NPM2Q86SE8 214 aaKnown RBP17.51■□□□□ 0.39
VMP1-203ENST00000586245 ZNF428Q96B54 188 aa17.51■□□□□ 0.39
VMP1-203ENST00000586245 STK31Q9BXU1 1019 aa17.51■□□□□ 0.39
VMP1-203ENST00000586245 ZBTB1Q9Y2K1 713 aa17.51■□□□□ 0.39
VMP1-203ENST00000586245 AKT1S1Q96B36 256 aa17.5■□□□□ 0.39
VMP1-203ENST00000586245 TFCP2L1Q9NZI6 479 aa17.5■□□□□ 0.39
VMP1-203ENST00000586245 DBF4Q9UBU7 674 aaPredicted RBP17.5■□□□□ 0.39
VMP1-203ENST00000586245 RTCBQ9Y3I0 505 aaKnown RBP17.5■□□□□ 0.39
VMP1-203ENST00000586245 RPS6KA4O75676 772 aa17.49■□□□□ 0.39
VMP1-203ENST00000586245 MYL6BP14649 208 aa17.49■□□□□ 0.39
VMP1-203ENST00000586245 PIP4K2AP48426 406 aaPredicted RBP17.49■□□□□ 0.39
VMP1-203ENST00000586245 SLC15A2Q16348 729 aa17.49■□□□□ 0.39
VMP1-203ENST00000586245 ZNF827Q17R98 1081 aa17.49■□□□□ 0.39
VMP1-203ENST00000586245 ANO8Q9HCE9 1232 aaPredicted RBP17.49■□□□□ 0.39
VMP1-203ENST00000586245 DDX21Q9NR30 783 aaKnown RBP eCLIP17.49■□□□□ 0.39
VMP1-203ENST00000586245 CHPF2Q9P2E5 772 aa17.49■□□□□ 0.39
VMP1-203ENST00000586245 ZNF330Q9Y3S2 320 aaPredicted RBP17.49■□□□□ 0.39
VMP1-203ENST00000586245 NBPF26B4DH59 902 aa17.48■□□□□ 0.39
VMP1-203ENST00000586245 IL6STP40189 918 aaPredicted RBP17.48■□□□□ 0.39
VMP1-203ENST00000586245 NBPF10Q6P3W6 841 aaKnown RBP17.48■□□□□ 0.39
VMP1-203ENST00000586245 NBPF15Q8N660 670 aa17.48■□□□□ 0.39
VMP1-203ENST00000586245 TCERG1O14776 1098 aaKnown RBP17.47■□□□□ 0.39
VMP1-203ENST00000586245 PHF14O94880 888 aa17.47■□□□□ 0.39
VMP1-203ENST00000586245 SSFA2P28290 1259 aa17.47■□□□□ 0.39
VMP1-203ENST00000586245 PDIA6Q15084 440 aa17.47■□□□□ 0.39
VMP1-203ENST00000586245 HYPKQ9NX55 129 aa17.47■□□□□ 0.39
VMP1-203ENST00000586245 A0A087WZG4 1122 aa17.46■□□□□ 0.39
VMP1-203ENST00000586245 ANXA1P04083 346 aa17.46■□□□□ 0.39
VMP1-203ENST00000586245 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
VMP1-203ENST00000586245 EIF5P55010 431 aaKnown RBP17.46■□□□□ 0.39
VMP1-203ENST00000586245 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.39
VMP1-203ENST00000586245 FLAD1Q8NFF5 587 aa17.46■□□□□ 0.39
VMP1-203ENST00000586245 MYH14Q7Z406 1995 aaKnown RBP17.46■□□□□ 0.39
VMP1-203ENST00000586245 COL15A1P39059 1388 aa17.45■□□□□ 0.38
VMP1-203ENST00000586245 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.45■□□□□ 0.38
VMP1-203ENST00000586245 ADRA2BP18089 450 aa17.45■□□□□ 0.38
VMP1-203ENST00000586245 PROSER3Q2NL68 480 aa17.45■□□□□ 0.38
VMP1-203ENST00000586245 TRAPPC3LQ5T215 181 aa17.45■□□□□ 0.38
VMP1-203ENST00000586245 ARXQ96QS3 562 aa17.45■□□□□ 0.38
VMP1-203ENST00000586245 SMC4Q9NTJ3 1288 aa17.45■□□□□ 0.38
VMP1-203ENST00000586245 RARSP54136 660 aaKnown RBP17.44■□□□□ 0.38
VMP1-203ENST00000586245 SSH1Q8WYL5 1049 aa17.44■□□□□ 0.38
VMP1-203ENST00000586245 MSH5O43196 834 aa17.43■□□□□ 0.38
VMP1-203ENST00000586245 RFC4P35249 363 aa17.43■□□□□ 0.38
VMP1-203ENST00000586245 AIMP1Q12904 312 aaKnown RBP17.43■□□□□ 0.38
VMP1-203ENST00000586245 SMIM5Q71RC9 77 aa17.43■□□□□ 0.38
VMP1-203ENST00000586245 BCL2L13Q9BXK5 485 aa17.43■□□□□ 0.38
VMP1-203ENST00000586245 UBR3Q6ZT12 1888 aa17.43■□□□□ 0.38
VMP1-203ENST00000586245 KIF6Q6ZMV9 814 aa17.42■□□□□ 0.38
VMP1-203ENST00000586245 COPS6Q7L5N1 327 aa17.42■□□□□ 0.38
VMP1-203ENST00000586245 LRP10Q7Z4F1 713 aa17.42■□□□□ 0.38
VMP1-203ENST00000586245 AMIGO3Q86WK7 504 aa17.42■□□□□ 0.38
VMP1-203ENST00000586245 DZIP3Q86Y13 1208 aaKnown RBP17.42■□□□□ 0.38
VMP1-203ENST00000586245 MRPL50Q8N5N7 158 aaKnown RBP17.42■□□□□ 0.38
VMP1-203ENST00000586245 XAGE3Q8WTP9 111 aa17.42■□□□□ 0.38
VMP1-203ENST00000586245 ARHGEF1Q92888 912 aaKnown RBP17.42■□□□□ 0.38
VMP1-203ENST00000586245 PHAXQ9H814 394 aaKnown RBP17.42■□□□□ 0.38
VMP1-203ENST00000586245 PNPLA7Q6ZV29 1317 aa17.42■□□□□ 0.38
VMP1-203ENST00000586245 ZPR1O75312 459 aa17.41■□□□□ 0.38
VMP1-203ENST00000586245 DDX58O95786 925 aaKnown RBP17.41■□□□□ 0.38
VMP1-203ENST00000586245 R3HDM1Q15032 1099 aaKnown RBP17.41■□□□□ 0.38
VMP1-203ENST00000586245 RCAN3Q9UKA8 241 aa17.41■□□□□ 0.38
VMP1-203ENST00000586245 FLIIQ13045 1269 aa17.4■□□□□ 0.38
VMP1-203ENST00000586245 COL23A1Q86Y22 540 aaPredicted RBP17.4■□□□□ 0.38
VMP1-203ENST00000586245 TBC1D2BQ9UPU7 963 aa17.4■□□□□ 0.38
VMP1-203ENST00000586245 TUBGCP6Q96RT7 1819 aa17.4■□□□□ 0.38
VMP1-203ENST00000586245 QSER1Q2KHR3 1735 aa17.39■□□□□ 0.37
VMP1-203ENST00000586245 TTLL7Q6ZT98 887 aa17.39■□□□□ 0.37
VMP1-203ENST00000586245 G2E3Q7L622 706 aa17.39■□□□□ 0.37
VMP1-203ENST00000586245 NARFQ9UHQ1 456 aa17.39■□□□□ 0.37
VMP1-203ENST00000586245 KIF16BQ96L93 1317 aa17.39■□□□□ 0.37
VMP1-203ENST00000586245 BCAR3O75815 825 aa17.38■□□□□ 0.37
VMP1-203ENST00000586245 BRPF1P55201 1214 aaPredicted RBP17.38■□□□□ 0.37
VMP1-203ENST00000586245 FKBP5Q13451 457 aaPredicted RBP17.38■□□□□ 0.37
VMP1-203ENST00000586245 ZBTB3Q9H5J0 574 aa17.38■□□□□ 0.37
VMP1-203ENST00000586245 MAP3K15Q6ZN16 1313 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms