RNA–Protein interactions for RNA: ENST00000585871.1

ROGDI-203, Transcript of rogdi homolog, humanhuman

TSL 2

Gene ROGDI, Length 983 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROGDI-203ENST00000585871 YTHDC1Q96MU7 727 aaKnown RBP28.4■■■□□ 2.14
ROGDI-203ENST00000585871 ZNF831Q5JPB2 1677 aa28.39■■■□□ 2.14
ROGDI-203ENST00000585871 E9PSI1 815 aa28.39■■■□□ 2.14
ROGDI-203ENST00000585871 KCNQ4P56696 695 aa28.39■■■□□ 2.14
ROGDI-203ENST00000585871 MYH16Q9H6N6 1097 aa28.39■■■□□ 2.14
ROGDI-203ENST00000585871 CICQ96RK0 1608 aaPredicted RBP28.39■■■□□ 2.13
ROGDI-203ENST00000585871 SLFN5Q08AF3 891 aa28.38■■■□□ 2.13
ROGDI-203ENST00000585871 FANCIQ9NVI1 1328 aa28.38■■■□□ 2.13
ROGDI-203ENST00000585871 GRIN3BO60391 1043 aa28.37■■■□□ 2.13
ROGDI-203ENST00000585871 EIF4A1P60842 406 aaKnown RBP28.36■■■□□ 2.13
ROGDI-203ENST00000585871 TSR2Q969E8 191 aaKnown RBP28.36■■■□□ 2.13
ROGDI-203ENST00000585871 CDCA7LQ96GN5 454 aa28.36■■■□□ 2.13
ROGDI-203ENST00000585871 ZNF496Q96IT1 587 aaPredicted RBP28.36■■■□□ 2.13
ROGDI-203ENST00000585871 HEG1Q9ULI3 1381 aa28.36■■■□□ 2.13
ROGDI-203ENST00000585871 FMNL2Q96PY5 1086 aa28.35■■■□□ 2.13
ROGDI-203ENST00000585871 LOC102724428A0A0B4J2F2 783 aa28.34■■■□□ 2.13
ROGDI-203ENST00000585871 PTCD1O75127 700 aaKnown RBP28.34■■■□□ 2.13
ROGDI-203ENST00000585871 SIK1P57059 783 aa28.34■■■□□ 2.13
ROGDI-203ENST00000585871 TRMT2AQ8IZ69 625 aaKnown RBP28.34■■■□□ 2.13
ROGDI-203ENST00000585871 ATP10DQ9P241 1426 aa28.34■■■□□ 2.13
ROGDI-203ENST00000585871 TJP1Q07157 1748 aa28.33■■■□□ 2.13
ROGDI-203ENST00000585871 VSIG10Q8N0Z9 540 aa28.32■■■□□ 2.12
ROGDI-203ENST00000585871 SLC4A9Q96Q91 983 aa28.32■■■□□ 2.12
ROGDI-203ENST00000585871 RBM42Q9BTD8 480 aaKnown RBP28.32■■■□□ 2.12
ROGDI-203ENST00000585871 C5P01031 1676 aa28.3■■■□□ 2.12
ROGDI-203ENST00000585871 DUSP27Q5VZP5 1158 aa28.29■■■□□ 2.12
ROGDI-203ENST00000585871 CCNL1Q9UK58 526 aaPredicted RBP28.29■■■□□ 2.12
ROGDI-203ENST00000585871 LAMB4A4D0S4 1761 aa28.29■■■□□ 2.12
ROGDI-203ENST00000585871 SNRPA1P09661 255 aaKnown RBP28.27■■■□□ 2.12
ROGDI-203ENST00000585871 KRT24Q2M2I5 525 aa28.27■■■□□ 2.12
ROGDI-203ENST00000585871 COL23A1Q86Y22 540 aaPredicted RBP28.27■■■□□ 2.12
ROGDI-203ENST00000585871 COL5A3P25940 1745 aaPredicted RBP28.26■■■□□ 2.12
ROGDI-203ENST00000585871 ATP6V1AP38606 617 aa28.26■■■□□ 2.11
ROGDI-203ENST00000585871 ITPK1Q13572 414 aa28.26■■■□□ 2.11
ROGDI-203ENST00000585871 SOS1Q07889 1333 aaPredicted RBP28.25■■■□□ 2.11
ROGDI-203ENST00000585871 MSH5O43196 834 aa28.25■■■□□ 2.11
ROGDI-203ENST00000585871 HOXB7P09629 217 aa28.25■■■□□ 2.11
ROGDI-203ENST00000585871 C8orf58Q8NAV2 365 aa28.25■■■□□ 2.11
ROGDI-203ENST00000585871 TAF1LQ8IZX4 1826 aa28.25■■■□□ 2.11
ROGDI-203ENST00000585871 ADCY9O60503 1353 aa28.24■■■□□ 2.11
ROGDI-203ENST00000585871 EXOSC9Q06265 439 aaKnown RBP28.24■■■□□ 2.11
ROGDI-203ENST00000585871 MSL1Q68DK7 614 aa28.24■■■□□ 2.11
ROGDI-203ENST00000585871 DNAJC10Q8IXB1 793 aa28.24■■■□□ 2.11
ROGDI-203ENST00000585871 TEX13AQ9BXU3 409 aaPredicted RBP28.23■■■□□ 2.11
ROGDI-203ENST00000585871 GPBP1L1Q9HC44 474 aaPredicted RBP28.23■■■□□ 2.11
ROGDI-203ENST00000585871 PRAMEF22A3QJZ6 481 aa28.22■■■□□ 2.11
ROGDI-203ENST00000585871 HSPA6P17066 643 aa28.21■■■□□ 2.11
ROGDI-203ENST00000585871 TSPYL6Q8N831 410 aa28.21■■■□□ 2.11
ROGDI-203ENST00000585871 TWISTNBQ3B726 338 aaPredicted RBP28.2■■■□□ 2.1
ROGDI-203ENST00000585871 LINC00116Q8NCU8 138 aa28.2■■■□□ 2.1
ROGDI-203ENST00000585871 C4BP0C0L5 1744 aa28.2■■■□□ 2.1
ROGDI-203ENST00000585871 CYP19A1P11511 503 aaPredicted RBP28.19■■■□□ 2.1
ROGDI-203ENST00000585871 HMGB2P26583 209 aaKnown RBP28.19■■■□□ 2.1
ROGDI-203ENST00000585871 CD2APQ9Y5K6 639 aa28.19■■■□□ 2.1
ROGDI-203ENST00000585871 USP16Q9Y5T5 823 aa28.19■■■□□ 2.1
ROGDI-203ENST00000585871 ELL2O00472 640 aaPredicted RBP28.18■■■□□ 2.1
ROGDI-203ENST00000585871 STARD3NLO95772 234 aa28.18■■■□□ 2.1
ROGDI-203ENST00000585871 CNTNAP4Q9C0A0 1308 aa28.18■■■□□ 2.1
ROGDI-203ENST00000585871 VAMP4O75379 141 aa28.15■■■□□ 2.1
ROGDI-203ENST00000585871 ZNF526Q8TF50 670 aaPredicted RBP28.15■■■□□ 2.1
ROGDI-203ENST00000585871 CT47B1P0C2W7 299 aaPredicted RBP28.14■■■□□ 2.1
ROGDI-203ENST00000585871 CRKLP46109 303 aaKnown RBP28.14■■■□□ 2.1
ROGDI-203ENST00000585871 RC3H1Q5TC82 1133 aaKnown RBP28.14■■■□□ 2.1
ROGDI-203ENST00000585871 HDGFL1Q5TGJ6 251 aa28.14■■■□□ 2.1
ROGDI-203ENST00000585871 ERBB4Q15303 1308 aa28.14■■■□□ 2.09
ROGDI-203ENST00000585871 CHMP4AQ9BY43 222 aa28.13■■■□□ 2.09
ROGDI-203ENST00000585871 CCDC87Q9NVE4 849 aa28.13■■■□□ 2.09
ROGDI-203ENST00000585871 EIF2S2P20042 333 aaKnown RBP28.12■■■□□ 2.09
ROGDI-203ENST00000585871 INTS5Q6P9B9 1019 aaKnown RBP28.12■■■□□ 2.09
ROGDI-203ENST00000585871 MYH14Q7Z406 1995 aaKnown RBP28.11■■■□□ 2.09
ROGDI-203ENST00000585871 A1BGP04217 495 aa28.1■■■□□ 2.09
ROGDI-203ENST00000585871 ZNF428Q96B54 188 aa28.1■■■□□ 2.09
ROGDI-203ENST00000585871 CCDC30Q5VVM6 783 aa28.09■■■□□ 2.09
ROGDI-203ENST00000585871 FLAD1Q8NFF5 587 aa28.09■■■□□ 2.09
ROGDI-203ENST00000585871 ZBTB1Q9Y2K1 713 aa28.09■■■□□ 2.09
ROGDI-203ENST00000585871 NBPF26B4DH59 902 aa28.08■■■□□ 2.09
ROGDI-203ENST00000585871 NBPF10Q6P3W6 841 aaKnown RBP28.08■■■□□ 2.09
ROGDI-203ENST00000585871 NBPF15Q8N660 670 aa28.08■■■□□ 2.09
ROGDI-203ENST00000585871 NECTIN2Q92692 538 aa28.08■■■□□ 2.09
ROGDI-203ENST00000585871 AK7Q96M32 723 aa28.08■■■□□ 2.09
ROGDI-203ENST00000585871 UBR3Q6ZT12 1888 aa28.07■■■□□ 2.08
ROGDI-203ENST00000585871 PDIA6Q15084 440 aa28.07■■■□□ 2.08
ROGDI-203ENST00000585871 DDX21Q9NR30 783 aaKnown RBP eCLIP28.06■■■□□ 2.08
ROGDI-203ENST00000585871 CHPF2Q9P2E5 772 aa28.06■■■□□ 2.08
ROGDI-203ENST00000585871 DBF4Q9UBU7 674 aaPredicted RBP28.06■■■□□ 2.08
ROGDI-203ENST00000585871 GNPATO15228 680 aa28.05■■■□□ 2.08
ROGDI-203ENST00000585871 RPS6KA4O75676 772 aa28.05■■■□□ 2.08
ROGDI-203ENST00000585871 KIF3CO14782 793 aa28.04■■■□□ 2.08
ROGDI-203ENST00000585871 CANXP27824 592 aaKnown RBP28.04■■■□□ 2.08
ROGDI-203ENST00000585871 IL6STP40189 918 aaPredicted RBP28.04■■■□□ 2.08
ROGDI-203ENST00000585871 PIP4K2AP48426 406 aaPredicted RBP28.04■■■□□ 2.08
ROGDI-203ENST00000585871 LRP10Q7Z4F1 713 aa28.04■■■□□ 2.08
ROGDI-203ENST00000585871 PROSER3Q2NL68 480 aa28.03■■■□□ 2.08
ROGDI-203ENST00000585871 AMIGO3Q86WK7 504 aa28.03■■■□□ 2.08
ROGDI-203ENST00000585871 STK31Q9BXU1 1019 aa28.03■■■□□ 2.08
ROGDI-203ENST00000585871 EIF5P55010 431 aaKnown RBP28.02■■■□□ 2.08
ROGDI-203ENST00000585871 ALDH1L2Q3SY69 923 aa28.02■■■□□ 2.08
ROGDI-203ENST00000585871 WWC3Q9ULE0 1092 aa28.02■■■□□ 2.08
ROGDI-203ENST00000585871 RTCBQ9Y3I0 505 aaKnown RBP28.02■■■□□ 2.08
ROGDI-203ENST00000585871 TCERG1O14776 1098 aaKnown RBP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms