RNA–Protein interactions for RNA: ENST00000585563.5

YIF1B-205, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-205ENST00000585563 SNRPA1P09661 255 aaKnown RBP23.47■■□□□ 1.35
YIF1B-205ENST00000585563 CCDC146Q8IYE0 955 aa23.47■■□□□ 1.35
YIF1B-205ENST00000585563 SOS1Q07889 1333 aaPredicted RBP23.46■■□□□ 1.35
YIF1B-205ENST00000585563 ZPR1O75312 459 aa23.45■■□□□ 1.34
YIF1B-205ENST00000585563 GYS1P13807 737 aa23.45■■□□□ 1.34
YIF1B-205ENST00000585563 ZBTB1Q9Y2K1 713 aa23.45■■□□□ 1.34
YIF1B-205ENST00000585563 CD2APQ9Y5K6 639 aa23.45■■□□□ 1.34
YIF1B-205ENST00000585563 KLHL34Q8N239 644 aa23.44■■□□□ 1.34
YIF1B-205ENST00000585563 BABAM1Q9NWV8 329 aa23.44■■□□□ 1.34
YIF1B-205ENST00000585563 USP42Q9H9J4 1324 aaKnown RBP23.43■■□□□ 1.34
YIF1B-205ENST00000585563 A0A087WZG4 1122 aa23.43■■□□□ 1.34
YIF1B-205ENST00000585563 CANXP27824 592 aaKnown RBP23.43■■□□□ 1.34
YIF1B-205ENST00000585563 MIS18AQ9NYP9 233 aa23.43■■□□□ 1.34
YIF1B-205ENST00000585563 MMP10P09238 476 aa23.42■■□□□ 1.34
YIF1B-205ENST00000585563 EIF5P55010 431 aaKnown RBP23.42■■□□□ 1.34
YIF1B-205ENST00000585563 NEUROD2Q15784 382 aa23.42■■□□□ 1.34
YIF1B-205ENST00000585563 NPM2Q86SE8 214 aaKnown RBP23.42■■□□□ 1.34
YIF1B-205ENST00000585563 THUMPD2Q9BTF0 503 aaKnown RBP23.42■■□□□ 1.34
YIF1B-205ENST00000585563 NARFQ9UHQ1 456 aa23.42■■□□□ 1.34
YIF1B-205ENST00000585563 USP16Q9Y5T5 823 aa23.42■■□□□ 1.34
YIF1B-205ENST00000585563 IL6STP40189 918 aaPredicted RBP23.41■■□□□ 1.34
YIF1B-205ENST00000585563 COL15A1P39059 1388 aa23.4■■□□□ 1.34
YIF1B-205ENST00000585563 SRP68Q9UHB9 627 aaKnown RBP23.4■■□□□ 1.34
YIF1B-205ENST00000585563 RRP7AQ9Y3A4 280 aaKnown RBP23.4■■□□□ 1.34
YIF1B-205ENST00000585563 A1BGP04217 495 aa23.39■■□□□ 1.33
YIF1B-205ENST00000585563 PARP3Q9Y6F1 533 aa23.39■■□□□ 1.33
YIF1B-205ENST00000585563 EIF4A1P60842 406 aaKnown RBP23.38■■□□□ 1.33
YIF1B-205ENST00000585563 CCDC184Q52MB2 194 aa23.38■■□□□ 1.33
YIF1B-205ENST00000585563 USPL1Q5W0Q7 1092 aa23.38■■□□□ 1.33
YIF1B-205ENST00000585563 C4AP0C0L4 1744 aa23.38■■□□□ 1.33
YIF1B-205ENST00000585563 FKBP8Q14318 412 aa23.37■■□□□ 1.33
YIF1B-205ENST00000585563 MRS2Q9HD23 443 aa23.37■■□□□ 1.33
YIF1B-205ENST00000585563 TSPYL4Q9UJ04 414 aa23.37■■□□□ 1.33
YIF1B-205ENST00000585563 TRIM35Q9UPQ4 493 aa23.37■■□□□ 1.33
YIF1B-205ENST00000585563 GIGYF1O75420 1035 aaPredicted RBP23.36■■□□□ 1.33
YIF1B-205ENST00000585563 PRAMEF22A3QJZ6 481 aa23.35■■□□□ 1.33
YIF1B-205ENST00000585563 APAF1O14727 1248 aa23.35■■□□□ 1.33
YIF1B-205ENST00000585563 TM4SF1P30408 202 aa23.35■■□□□ 1.33
YIF1B-205ENST00000585563 NLGN2Q8NFZ4 835 aa23.35■■□□□ 1.33
YIF1B-205ENST00000585563 KDM3BQ7LBC6 1761 aa23.34■■□□□ 1.33
YIF1B-205ENST00000585563 CHL1O00533 1208 aa23.33■■□□□ 1.33
YIF1B-205ENST00000585563 GPR162Q16538 588 aa23.33■■□□□ 1.33
YIF1B-205ENST00000585563 ZNF330Q9Y3S2 320 aaPredicted RBP23.33■■□□□ 1.33
YIF1B-205ENST00000585563 TGFB2P61812 414 aa23.31■■□□□ 1.32
YIF1B-205ENST00000585563 CALD1Q05682 793 aaKnown RBP23.31■■□□□ 1.32
YIF1B-205ENST00000585563 BCL2L12Q9HB09 334 aa23.31■■□□□ 1.32
YIF1B-205ENST00000585563 TBC1D2BQ9UPU7 963 aa23.31■■□□□ 1.32
YIF1B-205ENST00000585563 POLRMTO00411 1230 aaKnown RBP23.29■■□□□ 1.32
YIF1B-205ENST00000585563 DZIP3Q86Y13 1208 aaKnown RBP23.29■■□□□ 1.32
YIF1B-205ENST00000585563 CFAP44Q96MT7 982 aa23.29■■□□□ 1.32
YIF1B-205ENST00000585563 NBPF26B4DH59 902 aa23.28■■□□□ 1.32
YIF1B-205ENST00000585563 RGL2O15211 777 aa23.28■■□□□ 1.32
YIF1B-205ENST00000585563 DDR1Q08345 913 aa23.28■■□□□ 1.32
YIF1B-205ENST00000585563 NFIXQ14938 502 aa23.28■■□□□ 1.32
YIF1B-205ENST00000585563 NBPF10Q6P3W6 841 aaKnown RBP23.28■■□□□ 1.32
YIF1B-205ENST00000585563 CLEC4GQ6UXB4 293 aa23.28■■□□□ 1.32
YIF1B-205ENST00000585563 NBPF15Q8N660 670 aa23.28■■□□□ 1.32
YIF1B-205ENST00000585563 LAS1LQ9Y4W2 734 aaKnown RBP23.28■■□□□ 1.32
YIF1B-205ENST00000585563 GRIN3BO60391 1043 aa23.27■■□□□ 1.32
YIF1B-205ENST00000585563 NCBP3Q53F19 620 aaKnown RBP23.27■■□□□ 1.32
YIF1B-205ENST00000585563 ERBB4Q15303 1308 aa23.27■■□□□ 1.32
YIF1B-205ENST00000585563 CAMTA2O94983 1202 aa23.26■■□□□ 1.31
YIF1B-205ENST00000585563 PIP4K2AP48426 406 aaPredicted RBP23.26■■□□□ 1.31
YIF1B-205ENST00000585563 PELP1Q8IZL8 1130 aaKnown RBP23.26■■□□□ 1.31
YIF1B-205ENST00000585563 ZNF652Q9Y2D9 606 aa23.25■■□□□ 1.31
YIF1B-205ENST00000585563 C10orf71Q711Q0 1435 aa23.25■■□□□ 1.31
YIF1B-205ENST00000585563 SERPINB2P05120 415 aa23.24■■□□□ 1.31
YIF1B-205ENST00000585563 GNAI1P63096 354 aa23.24■■□□□ 1.31
YIF1B-205ENST00000585563 CCDC27Q2M243 656 aa23.24■■□□□ 1.31
YIF1B-205ENST00000585563 KIF13BQ9NQT8 1826 aa23.24■■□□□ 1.31
YIF1B-205ENST00000585563 LAMB4A4D0S4 1761 aa23.23■■□□□ 1.31
YIF1B-205ENST00000585563 ZNF853P0CG23 659 aa23.23■■□□□ 1.31
YIF1B-205ENST00000585563 TBC1D9BQ66K14 1250 aa23.23■■□□□ 1.31
YIF1B-205ENST00000585563 SETDB2Q96T68 719 aa23.23■■□□□ 1.31
YIF1B-205ENST00000585563 IFT57Q9NWB7 429 aa23.23■■□□□ 1.31
YIF1B-205ENST00000585563 BICDL1Q6ZP65 573 aa23.22■■□□□ 1.31
YIF1B-205ENST00000585563 HOXB7P09629 217 aa23.21■■□□□ 1.31
YIF1B-205ENST00000585563 EIF2S2P20042 333 aaKnown RBP23.21■■□□□ 1.31
YIF1B-205ENST00000585563 A0A0G2JLW4 131 aa23.2■■□□□ 1.3
YIF1B-205ENST00000585563 ERVV-1B6SEH8 477 aa23.2■■□□□ 1.3
YIF1B-205ENST00000585563 YBX3P16989 372 aaKnown RBP eCLIP23.2■■□□□ 1.39e-15■■□□□ 13.8
YIF1B-205ENST00000585563 MYL6BP14649 208 aa23.19■■□□□ 1.3
YIF1B-205ENST00000585563 YY1P25490 414 aa23.19■■□□□ 1.3
YIF1B-205ENST00000585563 MBIPQ9NS73 344 aa23.19■■□□□ 1.3
YIF1B-205ENST00000585563 PXDNLA1KZ92 1463 aa23.18■■□□□ 1.3
YIF1B-205ENST00000585563 CARMIL3Q8ND23 1372 aa23.18■■□□□ 1.3
YIF1B-205ENST00000585563 DPEP1P16444 411 aa23.18■■□□□ 1.3
YIF1B-205ENST00000585563 WWC1Q8IX03 1113 aa23.18■■□□□ 1.3
YIF1B-205ENST00000585563 NGEFQ8N5V2 710 aa23.18■■□□□ 1.3
YIF1B-205ENST00000585563 SCN7AQ01118 1682 aa23.18■■□□□ 1.3
YIF1B-205ENST00000585563 KIF6Q6ZMV9 814 aa23.17■■□□□ 1.3
YIF1B-205ENST00000585563 FAM9BQ8IZU0 186 aa23.17■■□□□ 1.3
YIF1B-205ENST00000585563 CHMP4AQ9BY43 222 aa23.17■■□□□ 1.3
YIF1B-205ENST00000585563 PIM2Q9P1W9 311 aa23.17■■□□□ 1.3
YIF1B-205ENST00000585563 PDZRN3Q9UPQ7 1066 aa23.17■■□□□ 1.3
YIF1B-205ENST00000585563 PDIA6Q15084 440 aa23.16■■□□□ 1.3
YIF1B-205ENST00000585563 AFDNP55196 1824 aaKnown RBP23.16■■□□□ 1.3
YIF1B-205ENST00000585563 NRXN2Q9P2S2 1712 aa23.16■■□□□ 1.3
YIF1B-205ENST00000585563 CHD4Q14839 1912 aa23.16■■□□□ 1.3
YIF1B-205ENST00000585563 MAP3K15Q6ZN16 1313 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms