RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 MRS2Q9HD23 443 aa21.38■■□□□ 1.01
ERBB2-222ENST00000584908 BABAM1Q9NWV8 329 aa21.38■■□□□ 1.01
ERBB2-222ENST00000584908 TRIM35Q9UPQ4 493 aa21.38■■□□□ 1.01
ERBB2-222ENST00000584908 LAMB4A4D0S4 1761 aa21.38■■□□□ 1.01
ERBB2-222ENST00000584908 ZBTB1Q9Y2K1 713 aa21.37■■□□□ 1.01
ERBB2-222ENST00000584908 RRP7AQ9Y3A4 280 aaKnown RBP21.37■■□□□ 1.01
ERBB2-222ENST00000584908 SNRPA1P09661 255 aaKnown RBP21.36■■□□□ 1.01
ERBB2-222ENST00000584908 MSL1Q68DK7 614 aa21.36■■□□□ 1.01
ERBB2-222ENST00000584908 MIS18AQ9NYP9 233 aa21.36■■□□□ 1.01
ERBB2-222ENST00000584908 RFC4P35249 363 aa21.35■■□□□ 1.01
ERBB2-222ENST00000584908 COL15A1P39059 1388 aa21.34■■□□□ 1.01
ERBB2-222ENST00000584908 USP42Q9H9J4 1324 aaKnown RBP21.34■■□□□ 1.01
ERBB2-222ENST00000584908 NEUROD2Q15784 382 aa21.34■■□□□ 1.01
ERBB2-222ENST00000584908 FHDC1Q9C0D6 1143 aaPredicted RBP21.34■■□□□ 1.01
ERBB2-222ENST00000584908 APAF1O14727 1248 aa21.33■■□□□ 1.01
ERBB2-222ENST00000584908 GYS1P13807 737 aa21.33■■□□□ 1.01
ERBB2-222ENST00000584908 EIF5P55010 431 aaKnown RBP21.33■■□□□ 1.01
ERBB2-222ENST00000584908 EIF4A1P60842 406 aaKnown RBP21.33■■□□□ 1.01
ERBB2-222ENST00000584908 NLGN1Q8N2Q7 840 aa21.33■■□□□ 1.01
ERBB2-222ENST00000584908 USP16Q9Y5T5 823 aa21.33■■□□□ 1.01
ERBB2-222ENST00000584908 SYT17Q9BSW7 474 aa21.32■■□□□ 1
ERBB2-222ENST00000584908 PRAMEF22A3QJZ6 481 aa21.31■■□□□ 1
ERBB2-222ENST00000584908 IL6STP40189 918 aaPredicted RBP21.31■■□□□ 1
ERBB2-222ENST00000584908 CHL1O00533 1208 aa21.3■■□□□ 1
ERBB2-222ENST00000584908 GIGYF1O75420 1035 aaPredicted RBP21.3■■□□□ 1
ERBB2-222ENST00000584908 CANXP27824 592 aaKnown RBP21.3■■□□□ 1
ERBB2-222ENST00000584908 NARFQ9UHQ1 456 aa21.3■■□□□ 1
ERBB2-222ENST00000584908 TSPYL4Q9UJ04 414 aa21.3■■□□□ 1
ERBB2-222ENST00000584908 SCN7AQ01118 1682 aa21.3■■□□□ 1
ERBB2-222ENST00000584908 A1BGP04217 495 aa21.29■■□□□ 1
ERBB2-222ENST00000584908 NCBP3Q53F19 620 aaKnown RBP21.29■■□□□ 1
ERBB2-222ENST00000584908 SRP68Q9UHB9 627 aaKnown RBP21.29■■□□□ 1
ERBB2-222ENST00000584908 KIF13BQ9NQT8 1826 aa21.29■■□□□ 1
ERBB2-222ENST00000584908 A0A087WZG4 1122 aa21.28■■□□□ 1
ERBB2-222ENST00000584908 ZPR1O75312 459 aa21.28■■□□□ 1
ERBB2-222ENST00000584908 MMP10P09238 476 aa21.28■■□□□ 1
ERBB2-222ENST00000584908 BCORQ6W2J9 1755 aa21.28■■□□□ 1
ERBB2-222ENST00000584908 CCDC27Q2M243 656 aa21.27■□□□□ 0.99
ERBB2-222ENST00000584908 CFAP44Q96MT7 982 aa21.27■□□□□ 0.99
ERBB2-222ENST00000584908 CD2APQ9Y5K6 639 aa21.27■□□□□ 0.99
ERBB2-222ENST00000584908 ZNF853P0CG23 659 aa21.26■□□□□ 0.99
ERBB2-222ENST00000584908 FKBP8Q14318 412 aa21.26■□□□□ 0.99
ERBB2-222ENST00000584908 USPL1Q5W0Q7 1092 aa21.26■□□□□ 0.99
ERBB2-222ENST00000584908 NBPF26B4DH59 902 aa21.25■□□□□ 0.99
ERBB2-222ENST00000584908 CALD1Q05682 793 aaKnown RBP21.25■□□□□ 0.99
ERBB2-222ENST00000584908 NBPF10Q6P3W6 841 aaKnown RBP21.25■□□□□ 0.99
ERBB2-222ENST00000584908 NBPF15Q8N660 670 aa21.25■□□□□ 0.99
ERBB2-222ENST00000584908 BCL2L12Q9HB09 334 aa21.25■□□□□ 0.99
ERBB2-222ENST00000584908 NRXN2Q9P2S2 1712 aa21.24■□□□□ 0.99
ERBB2-222ENST00000584908 TM4SF1P30408 202 aa21.24■□□□□ 0.99
ERBB2-222ENST00000584908 AFDNP55196 1824 aaKnown RBP21.22■□□□□ 0.99
ERBB2-222ENST00000584908 ERBB4Q15303 1308 aa21.22■□□□□ 0.99
ERBB2-222ENST00000584908 IFT57Q9NWB7 429 aa21.22■□□□□ 0.99
ERBB2-222ENST00000584908 KIAA1551Q9HCM1 1747 aa21.22■□□□□ 0.99
ERBB2-222ENST00000584908 C10orf71Q711Q0 1435 aa21.21■□□□□ 0.99
ERBB2-222ENST00000584908 RGL2O15211 777 aa21.21■□□□□ 0.99
ERBB2-222ENST00000584908 DDR1Q08345 913 aa21.21■□□□□ 0.99
ERBB2-222ENST00000584908 NLGN2Q8NFZ4 835 aa21.21■□□□□ 0.99
ERBB2-222ENST00000584908 PARP3Q9Y6F1 533 aa21.21■□□□□ 0.99
ERBB2-222ENST00000584908 POLRMTO00411 1230 aaKnown RBP21.2■□□□□ 0.98
ERBB2-222ENST00000584908 CAMTA2O94983 1202 aa21.2■□□□□ 0.98
ERBB2-222ENST00000584908 PIP4K2AP48426 406 aaPredicted RBP21.2■□□□□ 0.98
ERBB2-222ENST00000584908 GNAI1P63096 354 aa21.2■□□□□ 0.98
ERBB2-222ENST00000584908 NPM2Q86SE8 214 aaKnown RBP21.2■□□□□ 0.98
ERBB2-222ENST00000584908 KLHL34Q8N239 644 aa21.2■□□□□ 0.98
ERBB2-222ENST00000584908 MBIPQ9NS73 344 aa21.2■□□□□ 0.98
ERBB2-222ENST00000584908 TBC1D2BQ9UPU7 963 aa21.2■□□□□ 0.98
ERBB2-222ENST00000584908 HOXB7P09629 217 aa21.19■□□□□ 0.98
ERBB2-222ENST00000584908 NFIXQ14938 502 aa21.19■□□□□ 0.98
ERBB2-222ENST00000584908 DZIP3Q86Y13 1208 aaKnown RBP21.19■□□□□ 0.98
ERBB2-222ENST00000584908 WWC1Q8IX03 1113 aa21.19■□□□□ 0.98
ERBB2-222ENST00000584908 ZNF330Q9Y3S2 320 aaPredicted RBP21.19■□□□□ 0.98
ERBB2-222ENST00000584908 LAS1LQ9Y4W2 734 aaKnown RBP21.19■□□□□ 0.98
ERBB2-222ENST00000584908 CCER2I3L3R5 266 aa21.18■□□□□ 0.98
ERBB2-222ENST00000584908 FAM9BQ8IZU0 186 aa21.18■□□□□ 0.98
ERBB2-222ENST00000584908 GOLGB1Q14789 3259 aaKnown RBP21.18■□□□□ 0.98
ERBB2-222ENST00000584908 CLEC4GQ6UXB4 293 aa21.17■□□□□ 0.98
ERBB2-222ENST00000584908 NGEFQ8N5V2 710 aa21.17■□□□□ 0.98
ERBB2-222ENST00000584908 PDIA6Q15084 440 aa21.16■□□□□ 0.98
ERBB2-222ENST00000584908 LRP10Q7Z4F1 713 aa21.16■□□□□ 0.98
ERBB2-222ENST00000584908 IL16Q14005 1332 aa21.16■□□□□ 0.98
ERBB2-222ENST00000584908 NUP98P52948 1817 aa21.16■□□□□ 0.98
ERBB2-222ENST00000584908 KRT24Q2M2I5 525 aa21.15■□□□□ 0.98
ERBB2-222ENST00000584908 BRCA1P38398 1863 aaKnown RBP21.15■□□□□ 0.98
ERBB2-222ENST00000584908 PXDNLA1KZ92 1463 aa21.14■□□□□ 0.98
ERBB2-222ENST00000584908 N4BP2Q86UW6 1770 aaPredicted RBP21.14■□□□□ 0.98
ERBB2-222ENST00000584908 DCAF8L1A6NGE4 600 aa21.14■□□□□ 0.97
ERBB2-222ENST00000584908 TGFB2P61812 414 aa21.14■□□□□ 0.97
ERBB2-222ENST00000584908 TBC1D9BQ66K14 1250 aa21.14■□□□□ 0.97
ERBB2-222ENST00000584908 UTRNP46939 3433 aa21.12■□□□□ 0.97
ERBB2-222ENST00000584908 ERVV-1B6SEH8 477 aa21.12■□□□□ 0.97
ERBB2-222ENST00000584908 SERPINB2P05120 415 aa21.12■□□□□ 0.97
ERBB2-222ENST00000584908 EIF2S2P20042 333 aaKnown RBP21.12■□□□□ 0.97
ERBB2-222ENST00000584908 WDR63Q8IWG1 891 aa21.12■□□□□ 0.97
ERBB2-222ENST00000584908 ZNF652Q9Y2D9 606 aa21.12■□□□□ 0.97
ERBB2-222ENST00000584908 CARMIL3Q8ND23 1372 aa21.12■□□□□ 0.97
ERBB2-222ENST00000584908 DUSP27Q5VZP5 1158 aa21.11■□□□□ 0.97
ERBB2-222ENST00000584908 MYL6BP14649 208 aa21.1■□□□□ 0.97
ERBB2-222ENST00000584908 DIEXFQ68CQ4 756 aaKnown RBP21.1■□□□□ 0.97
ERBB2-222ENST00000584908 MAP3K15Q6ZN16 1313 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms