RNA–Protein interactions for RNA: ENST00000584604.1

TRAPPC8-212, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-212ENST00000584604 OCLNQ16625 522 aa10.99□□□□□ -0.65
TRAPPC8-212ENST00000584604 TBCELQ5QJ74 424 aa10.99□□□□□ -0.65
TRAPPC8-212ENST00000584604 SCG3Q8WXD2 468 aaKnown RBP10.99□□□□□ -0.65
TRAPPC8-212ENST00000584604 TIMMDC1Q9NPL8 285 aa10.99□□□□□ -0.65
TRAPPC8-212ENST00000584604 A0A1B0GTH6 734 aa10.98□□□□□ -0.65
TRAPPC8-212ENST00000584604 FOXO3O43524 673 aa10.98□□□□□ -0.65
TRAPPC8-212ENST00000584604 PPP1R12BO60237 982 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC8-212ENST00000584604 NPAS3Q8IXF0 933 aa10.98□□□□□ -0.65
TRAPPC8-212ENST00000584604 C1orf216Q8TAB5 229 aa10.98□□□□□ -0.65
TRAPPC8-212ENST00000584604 L3MBTL2Q969R5 705 aa10.98□□□□□ -0.65
TRAPPC8-212ENST00000584604 C2orf49Q9BVC5 232 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC8-212ENST00000584604 SLAIN2Q9P270 581 aa10.98□□□□□ -0.65
TRAPPC8-212ENST00000584604 SERTM1A2A2V5 107 aa10.97□□□□□ -0.65
TRAPPC8-212ENST00000584604 EML1O00423 815 aa10.97□□□□□ -0.65
TRAPPC8-212ENST00000584604 PHKA2P46019 1235 aa10.97□□□□□ -0.65
TRAPPC8-212ENST00000584604 PLA2G4AP47712 749 aa10.97□□□□□ -0.65
TRAPPC8-212ENST00000584604 CCDC155Q8N6L0 562 aa10.97□□□□□ -0.65
TRAPPC8-212ENST00000584604 ZDHHC3Q9NYG2 299 aa10.97□□□□□ -0.65
TRAPPC8-212ENST00000584604 CHMP3Q9Y3E7 222 aa10.97□□□□□ -0.65
TRAPPC8-212ENST00000584604 LGR5O75473 907 aa10.95□□□□□ -0.66
TRAPPC8-212ENST00000584604 F11P03951 625 aa10.95□□□□□ -0.66
TRAPPC8-212ENST00000584604 CXXC1Q9P0U4 656 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC8-212ENST00000584604 NXF1Q9UBU9 619 aaKnown RBP10.95□□□□□ -0.66
TRAPPC8-212ENST00000584604 PRMT3O60678 531 aa10.94□□□□□ -0.66
TRAPPC8-212ENST00000584604 PPFIA3O75145 1194 aa10.94□□□□□ -0.66
TRAPPC8-212ENST00000584604 NBPF1Q3BBV0 1214 aa10.94□□□□□ -0.66
TRAPPC8-212ENST00000584604 PRIMPOLQ96LW4 560 aa10.94□□□□□ -0.66
TRAPPC8-212ENST00000584604 ATP2B4P23634 1241 aa10.93□□□□□ -0.66
TRAPPC8-212ENST00000584604 MSX1P28360 303 aa10.93□□□□□ -0.66
TRAPPC8-212ENST00000584604 C1orf53Q5VUE5 145 aa10.93□□□□□ -0.66
TRAPPC8-212ENST00000584604 COL26A1Q96A83 441 aa10.93□□□□□ -0.66
TRAPPC8-212ENST00000584604 ZNF232Q9UNY5 417 aa10.93□□□□□ -0.66
TRAPPC8-212ENST00000584604 PARP3Q9Y6F1 533 aa10.93□□□□□ -0.66
TRAPPC8-212ENST00000584604 ATP4AP20648 1035 aa10.92□□□□□ -0.66
TRAPPC8-212ENST00000584604 ITGA6P23229 1130 aa10.92□□□□□ -0.66
TRAPPC8-212ENST00000584604 SSFA2P28290 1259 aa10.92□□□□□ -0.66
TRAPPC8-212ENST00000584604 SH3PXD2AQ5TCZ1 1133 aa10.92□□□□□ -0.66
TRAPPC8-212ENST00000584604 C7orf43Q8WVR3 580 aa10.92□□□□□ -0.66
TRAPPC8-212ENST00000584604 GMCL1Q96IK5 515 aa10.92□□□□□ -0.66
TRAPPC8-212ENST00000584604 GPC6Q9Y625 555 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC8-212ENST00000584604 FKBP5Q13451 457 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC8-212ENST00000584604 CHMP7Q8WUX9 453 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC8-212ENST00000584604 AIDAQ96BJ3 306 aa10.91□□□□□ -0.66
TRAPPC8-212ENST00000584604 CRISPLD1Q9H336 500 aa10.91□□□□□ -0.66
TRAPPC8-212ENST00000584604 CARNS1A5YM72 827 aa10.9□□□□□ -0.66
TRAPPC8-212ENST00000584604 TATP17735 454 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC8-212ENST00000584604 TXLNAP40222 546 aa10.9□□□□□ -0.66
TRAPPC8-212ENST00000584604 LBRQ14739 615 aaKnown RBP10.9□□□□□ -0.66
TRAPPC8-212ENST00000584604 NANOS1Q8WY41 292 aaKnown RBP10.9□□□□□ -0.66
TRAPPC8-212ENST00000584604 GAS2L1Q99501 681 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC8-212ENST00000584604 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRAPPC8-212ENST00000584604 H3BM21 787 aa10.89□□□□□ -0.67
TRAPPC8-212ENST00000584604 TERTO14746 1132 aaKnown RBP10.89□□□□□ -0.67
TRAPPC8-212ENST00000584604 TRIM22Q8IYM9 498 aa10.89□□□□□ -0.67
TRAPPC8-212ENST00000584604 H7C1W4 665 aa10.88□□□□□ -0.67
TRAPPC8-212ENST00000584604 B4GALNT3Q6L9W6 998 aa10.88□□□□□ -0.67
TRAPPC8-212ENST00000584604 PHLDB3Q6NSJ2 640 aa10.88□□□□□ -0.67
TRAPPC8-212ENST00000584604 ALDH16A1Q8IZ83 802 aa10.88□□□□□ -0.67
TRAPPC8-212ENST00000584604 PHACTR1Q9C0D0 580 aa10.88□□□□□ -0.67
TRAPPC8-212ENST00000584604 CUEDC1Q9NWM3 386 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC8-212ENST00000584604 HCN4Q9Y3Q4 1203 aa10.88□□□□□ -0.67
TRAPPC8-212ENST00000584604 PTCD1O75127 700 aaKnown RBP10.87□□□□□ -0.67
TRAPPC8-212ENST00000584604 MYO19Q96H55 970 aa10.87□□□□□ -0.67
TRAPPC8-212ENST00000584604 VSIG8P0DPA2 414 aa10.86□□□□□ -0.67
TRAPPC8-212ENST00000584604 DBN1Q16643 649 aa10.86□□□□□ -0.67
TRAPPC8-212ENST00000584604 NLRP8Q86W28 1048 aa10.86□□□□□ -0.67
TRAPPC8-212ENST00000584604 PGBD3Q8N328 593 aa10.86□□□□□ -0.67
TRAPPC8-212ENST00000584604 VTI1AQ96AJ9 217 aa10.86□□□□□ -0.67
TRAPPC8-212ENST00000584604 ZIC5Q96T25 663 aa10.86□□□□□ -0.67
TRAPPC8-212ENST00000584604 TRAIPQ9BWF2 469 aa10.86□□□□□ -0.67
TRAPPC8-212ENST00000584604 GPAMQ9HCL2 828 aa10.86□□□□□ -0.67
TRAPPC8-212ENST00000584604 RTN1Q16799 776 aa10.85□□□□□ -0.67
TRAPPC8-212ENST00000584604 RIPOR1Q6ZS17 1223 aa10.85□□□□□ -0.67
TRAPPC8-212ENST00000584604 RUBCNLQ9H714 662 aa10.85□□□□□ -0.67
TRAPPC8-212ENST00000584604 THBS1P07996 1170 aa10.84□□□□□ -0.67
TRAPPC8-212ENST00000584604 SLC16A10Q8TF71 515 aa10.84□□□□□ -0.67
TRAPPC8-212ENST00000584604 ZNF837Q96EG3 531 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC8-212ENST00000584604 NUCKS1Q9H1E3 243 aaKnown RBP10.84□□□□□ -0.67
TRAPPC8-212ENST00000584604 QTRT2Q9H974 415 aaKnown RBP10.84□□□□□ -0.67
TRAPPC8-212ENST00000584604 A0A1W2PNR3 127 aa10.83□□□□□ -0.68
TRAPPC8-212ENST00000584604 NFX1Q12986 1120 aaKnown RBP10.83□□□□□ -0.68
TRAPPC8-212ENST00000584604 UBAP2LQ14157 1087 aaKnown RBP10.83□□□□□ -0.68
TRAPPC8-212ENST00000584604 ARSJQ5FYB0 599 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC8-212ENST00000584604 EFHC2Q5JST6 749 aa10.83□□□□□ -0.68
TRAPPC8-212ENST00000584604 RHPN1Q8TCX5 695 aa10.83□□□□□ -0.68
TRAPPC8-212ENST00000584604 ZNF775Q96BV0 537 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC8-212ENST00000584604 HIF1AQ16665 826 aa10.82□□□□□ -0.68
TRAPPC8-212ENST00000584604 BICDL1Q6ZP65 573 aa10.82□□□□□ -0.68
TRAPPC8-212ENST00000584604 SV2AQ7L0J3 742 aa10.82□□□□□ -0.68
TRAPPC8-212ENST00000584604 BRD1O95696 1058 aa10.81□□□□□ -0.68
TRAPPC8-212ENST00000584604 VEGFBP49765 207 aa10.81□□□□□ -0.68
TRAPPC8-212ENST00000584604 SAMD5Q5TGI4 173 aa10.81□□□□□ -0.68
TRAPPC8-212ENST00000584604 CAPN12Q6ZSI9 719 aa10.81□□□□□ -0.68
TRAPPC8-212ENST00000584604 VWA5B2Q8N398 1253 aa10.81□□□□□ -0.68
TRAPPC8-212ENST00000584604 NGLY1Q96IV0 654 aa10.81□□□□□ -0.68
TRAPPC8-212ENST00000584604 ANKIB1Q9P2G1 1089 aa10.81□□□□□ -0.68
TRAPPC8-212ENST00000584604 FIGNL1Q6PIW4 674 aa10.8□□□□□ -0.68
TRAPPC8-212ENST00000584604 COX20Q5RI15 118 aa10.79□□□□□ -0.68
TRAPPC8-212ENST00000584604 C16orf46Q6P387 395 aa10.79□□□□□ -0.68
TRAPPC8-212ENST00000584604 IRF7Q92985 503 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms