RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 SRP68Q9UHB9 627 aaKnown RBP32.79■■■□□ 2.84
TTC39C-209ENST00000584250 ADRA2BP18089 450 aa32.78■■■□□ 2.84
TTC39C-209ENST00000584250 SYT17Q9BSW7 474 aa32.78■■■□□ 2.84
TTC39C-209ENST00000584250 KDM3BQ7LBC6 1761 aa32.78■■■□□ 2.84
TTC39C-209ENST00000584250 SOS1Q07889 1333 aaPredicted RBP32.77■■■□□ 2.84
TTC39C-209ENST00000584250 TRIM35Q9UPQ4 493 aa32.77■■■□□ 2.84
TTC39C-209ENST00000584250 CANXP27824 592 aaKnown RBP32.76■■■□□ 2.83
TTC39C-209ENST00000584250 RFC4P35249 363 aa32.76■■■□□ 2.83
TTC39C-209ENST00000584250 KLHL34Q8N239 644 aa32.76■■■□□ 2.83
TTC39C-209ENST00000584250 USP16Q9Y5T5 823 aa32.76■■■□□ 2.83
TTC39C-209ENST00000584250 MRS2Q9HD23 443 aa32.75■■■□□ 2.83
TTC39C-209ENST00000584250 GYS1P13807 737 aa32.74■■■□□ 2.83
TTC39C-209ENST00000584250 STARD3NLO95772 234 aa32.73■■■□□ 2.83
TTC39C-209ENST00000584250 A1BGP04217 495 aa32.73■■■□□ 2.83
TTC39C-209ENST00000584250 PNISRQ8TF01 805 aaKnown RBP32.73■■■□□ 2.83
TTC39C-209ENST00000584250 SENP3-EIF4A1A0A087X0R7 540 aa32.72■■■□□ 2.83
TTC39C-209ENST00000584250 APAF1O14727 1248 aa32.72■■■□□ 2.83
TTC39C-209ENST00000584250 PIP4K2AP48426 406 aaPredicted RBP32.72■■■□□ 2.83
TTC39C-209ENST00000584250 USP42Q9H9J4 1324 aaKnown RBP32.71■■■□□ 2.83
TTC39C-209ENST00000584250 COL15A1P39059 1388 aa32.7■■■□□ 2.83
TTC39C-209ENST00000584250 TEX13AQ9BXU3 409 aaPredicted RBP32.7■■■□□ 2.83
TTC39C-209ENST00000584250 MMP10P09238 476 aa32.69■■■□□ 2.82
TTC39C-209ENST00000584250 SNRPA1P09661 255 aaKnown RBP32.69■■■□□ 2.82
TTC39C-209ENST00000584250 EIF4A1P60842 406 aaKnown RBP32.69■■■□□ 2.82
TTC39C-209ENST00000584250 NLGN2Q8NFZ4 835 aa32.69■■■□□ 2.82
TTC39C-209ENST00000584250 EIF5P55010 431 aaKnown RBP32.68■■■□□ 2.82
TTC39C-209ENST00000584250 LMOD3Q0VAK6 560 aa32.68■■■□□ 2.82
TTC39C-209ENST00000584250 FKBP8Q14318 412 aa32.68■■■□□ 2.82
TTC39C-209ENST00000584250 USPL1Q5W0Q7 1092 aa32.66■■■□□ 2.82
TTC39C-209ENST00000584250 NLGN1Q8N2Q7 840 aa32.65■■■□□ 2.82
TTC39C-209ENST00000584250 TSPYL4Q9UJ04 414 aa32.65■■■□□ 2.82
TTC39C-209ENST00000584250 ZNF330Q9Y3S2 320 aaPredicted RBP32.65■■■□□ 2.82
TTC39C-209ENST00000584250 BCL2L12Q9HB09 334 aa32.64■■■□□ 2.82
TTC39C-209ENST00000584250 GIGYF1O75420 1035 aaPredicted RBP32.63■■■□□ 2.81
TTC39C-209ENST00000584250 NARFQ9UHQ1 456 aa32.63■■■□□ 2.81
TTC39C-209ENST00000584250 NBPF26B4DH59 902 aa32.62■■■□□ 2.81
TTC39C-209ENST00000584250 NBPF10Q6P3W6 841 aaKnown RBP32.62■■■□□ 2.81
TTC39C-209ENST00000584250 NBPF15Q8N660 670 aa32.62■■■□□ 2.81
TTC39C-209ENST00000584250 LAMB4A4D0S4 1761 aa32.6■■■□□ 2.81
TTC39C-209ENST00000584250 ZPR1O75312 459 aa32.6■■■□□ 2.81
TTC39C-209ENST00000584250 IL6STP40189 918 aaPredicted RBP32.6■■■□□ 2.81
TTC39C-209ENST00000584250 DDR1Q08345 913 aa32.6■■■□□ 2.81
TTC39C-209ENST00000584250 TBC1D2BQ9UPU7 963 aa32.6■■■□□ 2.81
TTC39C-209ENST00000584250 LAS1LQ9Y4W2 734 aaKnown RBP32.6■■■□□ 2.81
TTC39C-209ENST00000584250 CHL1O00533 1208 aa32.58■■■□□ 2.81
TTC39C-209ENST00000584250 KRT24Q2M2I5 525 aa32.57■■■□□ 2.8
TTC39C-209ENST00000584250 TM4SF1P30408 202 aa32.55■■■□□ 2.8
TTC39C-209ENST00000584250 CD2APQ9Y5K6 639 aa32.55■■■□□ 2.8
TTC39C-209ENST00000584250 BABAM1Q9NWV8 329 aa32.54■■■□□ 2.8
TTC39C-209ENST00000584250 NFIXQ14938 502 aa32.53■■■□□ 2.8
TTC39C-209ENST00000584250 PARP3Q9Y6F1 533 aa32.53■■■□□ 2.8
TTC39C-209ENST00000584250 SCN7AQ01118 1682 aa32.53■■■□□ 2.8
TTC39C-209ENST00000584250 A0A087WZG4 1122 aa32.52■■■□□ 2.8
TTC39C-209ENST00000584250 POLRMTO00411 1230 aaKnown RBP32.52■■■□□ 2.8
TTC39C-209ENST00000584250 FAM9BQ8IZU0 186 aa32.52■■■□□ 2.8
TTC39C-209ENST00000584250 CAMTA2O94983 1202 aa32.51■■■□□ 2.79
TTC39C-209ENST00000584250 DZIP3Q86Y13 1208 aaKnown RBP32.5■■■□□ 2.79
TTC39C-209ENST00000584250 ZNF853P0CG23 659 aa32.49■■■□□ 2.79
TTC39C-209ENST00000584250 BICDL1Q6ZP65 573 aa32.49■■■□□ 2.79
TTC39C-209ENST00000584250 CFAP44Q96MT7 982 aa32.49■■■□□ 2.79
TTC39C-209ENST00000584250 WWC3Q9ULE0 1092 aa32.49■■■□□ 2.79
TTC39C-209ENST00000584250 C10orf71Q711Q0 1435 aa32.49■■■□□ 2.79
TTC39C-209ENST00000584250 KIF13BQ9NQT8 1826 aa32.49■■■□□ 2.79
TTC39C-209ENST00000584250 TBC1D9BQ66K14 1250 aa32.48■■■□□ 2.79
TTC39C-209ENST00000584250 MBIPQ9NS73 344 aa32.48■■■□□ 2.79
TTC39C-209ENST00000584250 KIAA1551Q9HCM1 1747 aa32.48■■■□□ 2.79
TTC39C-209ENST00000584250 BCORQ6W2J9 1755 aa32.47■■■□□ 2.79
TTC39C-209ENST00000584250 AFDNP55196 1824 aaKnown RBP32.47■■■□□ 2.79
TTC39C-209ENST00000584250 EIF2S2P20042 333 aaKnown RBP32.47■■■□□ 2.79
TTC39C-209ENST00000584250 NGEFQ8N5V2 710 aa32.47■■■□□ 2.79
TTC39C-209ENST00000584250 PELP1Q8IZL8 1130 aaKnown RBP32.46■■■□□ 2.79
TTC39C-209ENST00000584250 NECTIN2Q92692 538 aa32.46■■■□□ 2.79
TTC39C-209ENST00000584250 MYL6BP14649 208 aa32.45■■■□□ 2.79
TTC39C-209ENST00000584250 SALL2Q9Y467 1007 aaPredicted RBP32.45■■■□□ 2.79
TTC39C-209ENST00000584250 ANXA1P04083 346 aa32.44■■■□□ 2.78
TTC39C-209ENST00000584250 YBX3P16989 372 aaKnown RBP eCLIP32.44■■■□□ 2.78
TTC39C-209ENST00000584250 NPM2Q86SE8 214 aaKnown RBP32.44■■■□□ 2.78
TTC39C-209ENST00000584250 N4BP2Q86UW6 1770 aaPredicted RBP32.44■■■□□ 2.78
TTC39C-209ENST00000584250 PXDNLA1KZ92 1463 aa32.43■■■□□ 2.78
TTC39C-209ENST00000584250 PDIA6Q15084 440 aa32.43■■■□□ 2.78
TTC39C-209ENST00000584250 GPR162Q16538 588 aa32.43■■■□□ 2.78
TTC39C-209ENST00000584250 PROSER3Q2NL68 480 aa32.43■■■□□ 2.78
TTC39C-209ENST00000584250 WWC1Q8IX03 1113 aa32.43■■■□□ 2.78
TTC39C-209ENST00000584250 TTLL7Q6ZT98 887 aa32.42■■■□□ 2.78
TTC39C-209ENST00000584250 IFT57Q9NWB7 429 aa32.42■■■□□ 2.78
TTC39C-209ENST00000584250 NRXN2Q9P2S2 1712 aa32.41■■■□□ 2.78
TTC39C-209ENST00000584250 DCAF8L1A6NGE4 600 aa32.41■■■□□ 2.78
TTC39C-209ENST00000584250 SERPINB2P05120 415 aa32.41■■■□□ 2.78
TTC39C-209ENST00000584250 LRP10Q7Z4F1 713 aa32.41■■■□□ 2.78
TTC39C-209ENST00000584250 A0A0G2JLW4 131 aa32.4■■■□□ 2.78
TTC39C-209ENST00000584250 CCDC27Q2M243 656 aa32.4■■■□□ 2.78
TTC39C-209ENST00000584250 GNAI1P63096 354 aa32.39■■■□□ 2.78
TTC39C-209ENST00000584250 HLFQ16534 295 aa32.39■■■□□ 2.78
TTC39C-209ENST00000584250 CARMIL3Q8ND23 1372 aa32.38■■■□□ 2.77
TTC39C-209ENST00000584250 DPEP1P16444 411 aa32.38■■■□□ 2.77
TTC39C-209ENST00000584250 CCDC24Q8N4L8 307 aa32.37■■■□□ 2.77
TTC39C-209ENST00000584250 ERBB4Q15303 1308 aa32.36■■■□□ 2.77
TTC39C-209ENST00000584250 CALD1Q05682 793 aaKnown RBP32.36■■■□□ 2.77
TTC39C-209ENST00000584250 DUSP27Q5VZP5 1158 aa32.36■■■□□ 2.77
TTC39C-209ENST00000584250 TSR2Q969E8 191 aaKnown RBP32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 260.6 ms