RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 RUNDC1Q96C34 613 aa22.26■■□□□ 1.15
TSEN54-211ENST00000583818 SYT17Q9BSW7 474 aa22.26■■□□□ 1.15
TSEN54-211ENST00000583818 SRP68Q9UHB9 627 aaKnown RBP22.26■■□□□ 1.15
TSEN54-211ENST00000583818 SENP3-EIF4A1A0A087X0R7 540 aa22.25■■□□□ 1.15
TSEN54-211ENST00000583818 CANXP27824 592 aaKnown RBP22.25■■□□□ 1.15
TSEN54-211ENST00000583818 RFC4P35249 363 aa22.25■■□□□ 1.15
TSEN54-211ENST00000583818 ADRA2BP18089 450 aa22.23■■□□□ 1.15
TSEN54-211ENST00000583818 PIP4K2AP48426 406 aaPredicted RBP22.23■■□□□ 1.15
TSEN54-211ENST00000583818 SOS1Q07889 1333 aaPredicted RBP22.23■■□□□ 1.15
TSEN54-211ENST00000583818 GYS1P13807 737 aa22.22■■□□□ 1.15
TSEN54-211ENST00000583818 KDM3BQ7LBC6 1761 aa22.22■■□□□ 1.15
TSEN54-211ENST00000583818 STARD3NLO95772 234 aa22.21■■□□□ 1.15
TSEN54-211ENST00000583818 A1BGP04217 495 aa22.21■■□□□ 1.15
TSEN54-211ENST00000583818 NLGN2Q8NFZ4 835 aa22.21■■□□□ 1.15
TSEN54-211ENST00000583818 MRS2Q9HD23 443 aa22.21■■□□□ 1.15
TSEN54-211ENST00000583818 ZNF330Q9Y3S2 320 aaPredicted RBP22.21■■□□□ 1.15
TSEN54-211ENST00000583818 USP16Q9Y5T5 823 aa22.21■■□□□ 1.15
TSEN54-211ENST00000583818 MMP10P09238 476 aa22.2■■□□□ 1.14
TSEN54-211ENST00000583818 TRIM35Q9UPQ4 493 aa22.2■■□□□ 1.14
TSEN54-211ENST00000583818 COL15A1P39059 1388 aa22.2■■□□□ 1.14
TSEN54-211ENST00000583818 APAF1O14727 1248 aa22.19■■□□□ 1.14
TSEN54-211ENST00000583818 USP42Q9H9J4 1324 aaKnown RBP22.19■■□□□ 1.14
TSEN54-211ENST00000583818 SNRPA1P09661 255 aaKnown RBP22.18■■□□□ 1.14
TSEN54-211ENST00000583818 FKBP8Q14318 412 aa22.18■■□□□ 1.14
TSEN54-211ENST00000583818 USPL1Q5W0Q7 1092 aa22.18■■□□□ 1.14
TSEN54-211ENST00000583818 TEX13AQ9BXU3 409 aaPredicted RBP22.18■■□□□ 1.14
TSEN54-211ENST00000583818 LMOD3Q0VAK6 560 aa22.17■■□□□ 1.14
TSEN54-211ENST00000583818 PNISRQ8TF01 805 aaKnown RBP22.17■■□□□ 1.14
TSEN54-211ENST00000583818 TSPYL4Q9UJ04 414 aa22.17■■□□□ 1.14
TSEN54-211ENST00000583818 ZPR1O75312 459 aa22.15■■□□□ 1.14
TSEN54-211ENST00000583818 EIF5P55010 431 aaKnown RBP22.15■■□□□ 1.14
TSEN54-211ENST00000583818 EIF4A1P60842 406 aaKnown RBP22.15■■□□□ 1.14
TSEN54-211ENST00000583818 NLGN1Q8N2Q7 840 aa22.15■■□□□ 1.14
TSEN54-211ENST00000583818 LAS1LQ9Y4W2 734 aaKnown RBP22.15■■□□□ 1.14
TSEN54-211ENST00000583818 GOLGB1Q14789 3259 aaKnown RBP22.15■■□□□ 1.14
TSEN54-211ENST00000583818 TBC1D2BQ9UPU7 963 aa22.14■■□□□ 1.13
TSEN54-211ENST00000583818 NARFQ9UHQ1 456 aa22.13■■□□□ 1.13
TSEN54-211ENST00000583818 WWC3Q9ULE0 1092 aa22.13■■□□□ 1.13
TSEN54-211ENST00000583818 GIGYF1O75420 1035 aaPredicted RBP22.12■■□□□ 1.13
TSEN54-211ENST00000583818 DDR1Q08345 913 aa22.12■■□□□ 1.13
TSEN54-211ENST00000583818 PELP1Q8IZL8 1130 aaKnown RBP22.12■■□□□ 1.13
TSEN54-211ENST00000583818 BCL2L12Q9HB09 334 aa22.12■■□□□ 1.13
TSEN54-211ENST00000583818 LAMB4A4D0S4 1761 aa22.12■■□□□ 1.13
TSEN54-211ENST00000583818 UTRNP46939 3433 aa22.11■■□□□ 1.13
TSEN54-211ENST00000583818 NBPF26B4DH59 902 aa22.11■■□□□ 1.13
TSEN54-211ENST00000583818 IL6STP40189 918 aaPredicted RBP22.11■■□□□ 1.13
TSEN54-211ENST00000583818 NBPF10Q6P3W6 841 aaKnown RBP22.11■■□□□ 1.13
TSEN54-211ENST00000583818 NBPF15Q8N660 670 aa22.11■■□□□ 1.13
TSEN54-211ENST00000583818 KRT24Q2M2I5 525 aa22.1■■□□□ 1.13
TSEN54-211ENST00000583818 BICDL1Q6ZP65 573 aa22.09■■□□□ 1.13
TSEN54-211ENST00000583818 CD2APQ9Y5K6 639 aa22.09■■□□□ 1.13
TSEN54-211ENST00000583818 PARP3Q9Y6F1 533 aa22.09■■□□□ 1.13
TSEN54-211ENST00000583818 NFIXQ14938 502 aa22.08■■□□□ 1.13
TSEN54-211ENST00000583818 SCN7AQ01118 1682 aa22.07■■□□□ 1.12
TSEN54-211ENST00000583818 A0A087WZG4 1122 aa22.07■■□□□ 1.12
TSEN54-211ENST00000583818 DCAF8L1A6NGE4 600 aa22.07■■□□□ 1.12
TSEN54-211ENST00000583818 CHL1O00533 1208 aa22.07■■□□□ 1.12
TSEN54-211ENST00000583818 TM4SF1P30408 202 aa22.07■■□□□ 1.12
TSEN54-211ENST00000583818 FAM9BQ8IZU0 186 aa22.07■■□□□ 1.12
TSEN54-211ENST00000583818 NGEFQ8N5V2 710 aa22.07■■□□□ 1.12
TSEN54-211ENST00000583818 POLRMTO00411 1230 aaKnown RBP22.06■■□□□ 1.12
TSEN54-211ENST00000583818 GPR162Q16538 588 aa22.06■■□□□ 1.12
TSEN54-211ENST00000583818 NPM2Q86SE8 214 aaKnown RBP22.06■■□□□ 1.12
TSEN54-211ENST00000583818 DZIP3Q86Y13 1208 aaKnown RBP22.06■■□□□ 1.12
TSEN54-211ENST00000583818 NECTIN2Q92692 538 aa22.06■■□□□ 1.12
TSEN54-211ENST00000583818 CAMTA2O94983 1202 aa22.05■■□□□ 1.12
TSEN54-211ENST00000583818 EIF2S2P20042 333 aaKnown RBP22.05■■□□□ 1.12
TSEN54-211ENST00000583818 TBC1D9BQ66K14 1250 aa22.05■■□□□ 1.12
TSEN54-211ENST00000583818 C10orf71Q711Q0 1435 aa22.05■■□□□ 1.12
TSEN54-211ENST00000583818 MYL6BP14649 208 aa22.04■■□□□ 1.12
TSEN54-211ENST00000583818 BABAM1Q9NWV8 329 aa22.04■■□□□ 1.12
TSEN54-211ENST00000583818 SALL2Q9Y467 1007 aaPredicted RBP22.04■■□□□ 1.12
TSEN54-211ENST00000583818 N4BP2Q86UW6 1770 aaPredicted RBP22.04■■□□□ 1.12
TSEN54-211ENST00000583818 BCORQ6W2J9 1755 aa22.03■■□□□ 1.12
TSEN54-211ENST00000583818 YBX3P16989 372 aaKnown RBP eCLIP22.03■■□□□ 1.12
TSEN54-211ENST00000583818 MBIPQ9NS73 344 aa22.03■■□□□ 1.12
TSEN54-211ENST00000583818 AFDNP55196 1824 aaKnown RBP22.03■■□□□ 1.12
TSEN54-211ENST00000583818 KIF13BQ9NQT8 1826 aa22.03■■□□□ 1.12
TSEN54-211ENST00000583818 KIAA1551Q9HCM1 1747 aa22.03■■□□□ 1.12
TSEN54-211ENST00000583818 PXDNLA1KZ92 1463 aa22.03■■□□□ 1.12
TSEN54-211ENST00000583818 ANXA1P04083 346 aa22.02■■□□□ 1.12
TSEN54-211ENST00000583818 A0A0G2JLW4 131 aa22.01■■□□□ 1.11
TSEN54-211ENST00000583818 CFAP44Q96MT7 982 aa22.01■■□□□ 1.11
TSEN54-211ENST00000583818 SERPINB2P05120 415 aa22■■□□□ 1.11
TSEN54-211ENST00000583818 ZNF853P0CG23 659 aa22■■□□□ 1.11
TSEN54-211ENST00000583818 PROSER3Q2NL68 480 aa22■■□□□ 1.11
TSEN54-211ENST00000583818 CCDC24Q8N4L8 307 aa22■■□□□ 1.11
TSEN54-211ENST00000583818 DPEP1P16444 411 aa21.99■■□□□ 1.11
TSEN54-211ENST00000583818 TTLL7Q6ZT98 887 aa21.99■■□□□ 1.11
TSEN54-211ENST00000583818 CARMIL3Q8ND23 1372 aa21.99■■□□□ 1.11
TSEN54-211ENST00000583818 PDIA6Q15084 440 aa21.98■■□□□ 1.11
TSEN54-211ENST00000583818 HLFQ16534 295 aa21.98■■□□□ 1.11
TSEN54-211ENST00000583818 IFT57Q9NWB7 429 aa21.98■■□□□ 1.11
TSEN54-211ENST00000583818 CHRNA5P30532 468 aa21.97■■□□□ 1.11
TSEN54-211ENST00000583818 WWC1Q8IX03 1113 aa21.97■■□□□ 1.11
TSEN54-211ENST00000583818 NRXN2Q9P2S2 1712 aa21.97■■□□□ 1.11
TSEN54-211ENST00000583818 ELL2O00472 640 aaPredicted RBP21.96■■□□□ 1.11
TSEN54-211ENST00000583818 GNAI1P63096 354 aa21.96■■□□□ 1.11
TSEN54-211ENST00000583818 TSR2Q969E8 191 aaKnown RBP21.96■■□□□ 1.11
TSEN54-211ENST00000583818 CALD1Q05682 793 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms