RNA–Protein interactions for RNA: ENST00000583361.1

PRKCA-204, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-204ENST00000583361 ZBTB1Q9Y2K1 713 aa10.48□□□□□ -0.73
PRKCA-204ENST00000583361 MYBBP1AQ9BQG0 1328 aaKnown RBP10.48□□□□□ -0.73
PRKCA-204ENST00000583361 COL15A1P39059 1388 aa10.48□□□□□ -0.73
PRKCA-204ENST00000583361 HEG1Q9ULI3 1381 aa10.48□□□□□ -0.73
PRKCA-204ENST00000583361 INTS5Q6P9B9 1019 aaKnown RBP10.47□□□□□ -0.73
PRKCA-204ENST00000583361 GRIN3BO60391 1043 aa10.46□□□□□ -0.73
PRKCA-204ENST00000583361 WDR43Q15061 677 aaKnown RBP eCLIP10.46□□□□□ -0.73
PRKCA-204ENST00000583361 USPL1Q5W0Q7 1092 aa10.46□□□□□ -0.73
PRKCA-204ENST00000583361 TEX13AQ9BXU3 409 aaPredicted RBP10.46□□□□□ -0.73
PRKCA-204ENST00000583361 SOS1Q07889 1333 aaPredicted RBP10.46□□□□□ -0.73
PRKCA-204ENST00000583361 USP42Q9H9J4 1324 aaKnown RBP10.46□□□□□ -0.73
PRKCA-204ENST00000583361 CEMIPQ8WUJ3 1361 aa10.46□□□□□ -0.74
PRKCA-204ENST00000583361 LAMB4A4D0S4 1761 aa10.46□□□□□ -0.74
PRKCA-204ENST00000583361 KDM3BQ7LBC6 1761 aa10.46□□□□□ -0.74
PRKCA-204ENST00000583361 CACNA1SQ13698 1873 aa10.45□□□□□ -0.74
PRKCA-204ENST00000583361 KCNQ3O43525 872 aa10.45□□□□□ -0.74
PRKCA-204ENST00000583361 HTATSF1O43719 755 aaKnown RBP10.45□□□□□ -0.74
PRKCA-204ENST00000583361 FKBP8Q14318 412 aa10.45□□□□□ -0.74
PRKCA-204ENST00000583361 NFE2L2Q16236 605 aa10.45□□□□□ -0.74
PRKCA-204ENST00000583361 BRCA1P38398 1863 aaKnown RBP10.44□□□□□ -0.74
PRKCA-204ENST00000583361 KIAA1551Q9HCM1 1747 aa10.44□□□□□ -0.74
PRKCA-204ENST00000583361 SCN7AQ01118 1682 aa10.44□□□□□ -0.74
PRKCA-204ENST00000583361 UTRNP46939 3433 aa10.44□□□□□ -0.74
PRKCA-204ENST00000583361 YBX3P16989 372 aaKnown RBP eCLIP10.44□□□□□ -0.74
PRKCA-204ENST00000583361 TAF7Q15545 349 aaPredicted RBP10.44□□□□□ -0.74
PRKCA-204ENST00000583361 BICDL1Q6ZP65 573 aa10.44□□□□□ -0.74
PRKCA-204ENST00000583361 CCDC146Q8IYE0 955 aa10.44□□□□□ -0.74
PRKCA-204ENST00000583361 MIS18AQ9NYP9 233 aa10.44□□□□□ -0.74
PRKCA-204ENST00000583361 BCORQ6W2J9 1755 aa10.44□□□□□ -0.74
PRKCA-204ENST00000583361 GOLGB1Q14789 3259 aaKnown RBP10.43□□□□□ -0.74
PRKCA-204ENST00000583361 ARFGEF1Q9Y6D6 1849 aa10.43□□□□□ -0.74
PRKCA-204ENST00000583361 A0A087WZG4 1122 aa10.43□□□□□ -0.74
PRKCA-204ENST00000583361 NPHP1O15259 732 aa10.43□□□□□ -0.74
PRKCA-204ENST00000583361 A1BGP04217 495 aa10.43□□□□□ -0.74
PRKCA-204ENST00000583361 NEUROD2Q15784 382 aa10.43□□□□□ -0.74
PRKCA-204ENST00000583361 PLEKHF1Q96S99 279 aa10.43□□□□□ -0.74
PRKCA-204ENST00000583361 NARFQ9UHQ1 456 aa10.43□□□□□ -0.74
PRKCA-204ENST00000583361 C10orf71Q711Q0 1435 aa10.42□□□□□ -0.74
PRKCA-204ENST00000583361 A0A0G2JLW4 131 aa10.42□□□□□ -0.74
PRKCA-204ENST00000583361 SNRPA1P09661 255 aaKnown RBP10.42□□□□□ -0.74
PRKCA-204ENST00000583361 PIP4K2AP48426 406 aaPredicted RBP10.42□□□□□ -0.74
PRKCA-204ENST00000583361 RIPK4P57078 832 aa10.42□□□□□ -0.74
PRKCA-204ENST00000583361 PNISRQ8TF01 805 aaKnown RBP10.42□□□□□ -0.74
PRKCA-204ENST00000583361 THUMPD2Q9BTF0 503 aaKnown RBP10.42□□□□□ -0.74
PRKCA-204ENST00000583361 TBC1D2BQ9UPU7 963 aa10.42□□□□□ -0.74
PRKCA-204ENST00000583361 BCS1LQ9Y276 419 aa10.42□□□□□ -0.74
PRKCA-204ENST00000583361 USP16Q9Y5T5 823 aa10.42□□□□□ -0.74
PRKCA-204ENST00000583361 PXDNLA1KZ92 1463 aa10.42□□□□□ -0.74
PRKCA-204ENST00000583361 CCDC88AQ3V6T2 1871 aa10.41□□□□□ -0.74
PRKCA-204ENST00000583361 PRAMEF22A3QJZ6 481 aa10.41□□□□□ -0.74
PRKCA-204ENST00000583361 IL6STP40189 918 aaPredicted RBP10.41□□□□□ -0.74
PRKCA-204ENST00000583361 EIF5P55010 431 aaKnown RBP10.41□□□□□ -0.74
PRKCA-204ENST00000583361 TGFB2P61812 414 aa10.41□□□□□ -0.74
PRKCA-204ENST00000583361 DDR1Q08345 913 aa10.41□□□□□ -0.74
PRKCA-204ENST00000583361 PRKRIP1Q9H875 184 aaPredicted RBP10.41□□□□□ -0.74
PRKCA-204ENST00000583361 RRP7AQ9Y3A4 280 aaKnown RBP10.41□□□□□ -0.74
PRKCA-204ENST00000583361 NUP98P52948 1817 aa10.41□□□□□ -0.74
PRKCA-204ENST00000583361 POLRMTO00411 1230 aaKnown RBP10.4□□□□□ -0.74
PRKCA-204ENST00000583361 DPEP1P16444 411 aa10.4□□□□□ -0.74
PRKCA-204ENST00000583361 LMOD3Q0VAK6 560 aa10.4□□□□□ -0.74
PRKCA-204ENST00000583361 NFIXQ14938 502 aa10.4□□□□□ -0.74
PRKCA-204ENST00000583361 DZIP3Q86Y13 1208 aaKnown RBP10.4□□□□□ -0.74
PRKCA-204ENST00000583361 NGEFQ8N5V2 710 aa10.4□□□□□ -0.74
PRKCA-204ENST00000583361 ZNF784Q8NCA9 323 aaPredicted RBP10.4□□□□□ -0.74
PRKCA-204ENST00000583361 TSPYL4Q9UJ04 414 aa10.4□□□□□ -0.74
PRKCA-204ENST00000583361 LAS1LQ9Y4W2 734 aaKnown RBP10.4□□□□□ -0.74
PRKCA-204ENST00000583361 NRXN2Q9P2S2 1712 aa10.4□□□□□ -0.74
PRKCA-204ENST00000583361 DLEC1Q9Y238 1755 aa10.39□□□□□ -0.75
PRKCA-204ENST00000583361 ANKRD31Q8N7Z5 1873 aa10.39□□□□□ -0.75
PRKCA-204ENST00000583361 ZNF316A6NFI3 1004 aaPredicted RBP10.39□□□□□ -0.75
PRKCA-204ENST00000583361 SERPINB2P05120 415 aa10.39□□□□□ -0.75
PRKCA-204ENST00000583361 TMPOP42166 694 aaKnown RBP10.39□□□□□ -0.75
PRKCA-204ENST00000583361 TM4SF1P30408 202 aa10.38□□□□□ -0.75
PRKCA-204ENST00000583361 CHRNA5P30532 468 aa10.38□□□□□ -0.75
PRKCA-204ENST00000583361 TBC1D9BQ66K14 1250 aa10.38□□□□□ -0.75
PRKCA-204ENST00000583361 RUNDC1Q96C34 613 aa10.38□□□□□ -0.75
PRKCA-204ENST00000583361 BCL2L12Q9HB09 334 aa10.38□□□□□ -0.75
PRKCA-204ENST00000583361 PIM2Q9P1W9 311 aa10.38□□□□□ -0.75
PRKCA-204ENST00000583361 ZNF652Q9Y2D9 606 aa10.38□□□□□ -0.75
PRKCA-204ENST00000583361 SBF1O95248 1867 aa10.37□□□□□ -0.75
PRKCA-204ENST00000583361 MYL6BP14649 208 aa10.37□□□□□ -0.75
PRKCA-204ENST00000583361 ARHGAP27Q6ZUM4 889 aa10.37□□□□□ -0.75
PRKCA-204ENST00000583361 CCDC24Q8N4L8 307 aa10.37□□□□□ -0.75
PRKCA-204ENST00000583361 ZNF526Q8TF50 670 aaPredicted RBP10.37□□□□□ -0.75
PRKCA-204ENST00000583361 SETDB2Q96T68 719 aa10.37□□□□□ -0.75
PRKCA-204ENST00000583361 ADAMTS8Q9UP79 889 aa10.37□□□□□ -0.75
PRKCA-204ENST00000583361 CARMIL3Q8ND23 1372 aa10.37□□□□□ -0.75
PRKCA-204ENST00000583361 FAM177BA6PVY3 158 aa10.36□□□□□ -0.75
PRKCA-204ENST00000583361 ANP32CO43423 234 aa10.36□□□□□ -0.75
PRKCA-204ENST00000583361 EIF2S2P20042 333 aaKnown RBP10.36□□□□□ -0.75
PRKCA-204ENST00000583361 EIF4A1P60842 406 aaKnown RBP10.36□□□□□ -0.75
PRKCA-204ENST00000583361 DALRD3Q5D0E6 543 aaKnown RBP10.36□□□□□ -0.75
PRKCA-204ENST00000583361 COL11A2P13942 1736 aaPredicted RBP10.36□□□□□ -0.75
PRKCA-204ENST00000583361 H0YIN7 160 aa10.35□□□□□ -0.75
PRKCA-204ENST00000583361 GIGYF1O75420 1035 aaPredicted RBP10.35□□□□□ -0.75
PRKCA-204ENST00000583361 CAMTA2O94983 1202 aa10.35□□□□□ -0.75
PRKCA-204ENST00000583361 GTF2E1P29083 439 aaPredicted RBP10.35□□□□□ -0.75
PRKCA-204ENST00000583361 ST5P78524 1137 aa10.35□□□□□ -0.75
PRKCA-204ENST00000583361 KIF6Q6ZMV9 814 aa10.35□□□□□ -0.75
PRKCA-204ENST00000583361 C2CD5Q86YS7 1000 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms