RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 C4AP0C0L4 1744 aa18.41■□□□□ 0.54
GGA3-215ENST00000582821 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
GGA3-215ENST00000582821 SNRPA1P09661 255 aaKnown RBP18.41■□□□□ 0.54
GGA3-215ENST00000582821 LMOD3Q0VAK6 560 aa18.41■□□□□ 0.54
GGA3-215ENST00000582821 CD2APQ9Y5K6 639 aa18.41■□□□□ 0.54
GGA3-215ENST00000582821 EIF5P55010 431 aaKnown RBP18.4■□□□□ 0.54
GGA3-215ENST00000582821 CCDC146Q8IYE0 955 aa18.4■□□□□ 0.54
GGA3-215ENST00000582821 USP42Q9H9J4 1324 aaKnown RBP18.4■□□□□ 0.54
GGA3-215ENST00000582821 ANP32CO43423 234 aa18.39■□□□□ 0.53
GGA3-215ENST00000582821 THUMPD2Q9BTF0 503 aaKnown RBP18.39■□□□□ 0.53
GGA3-215ENST00000582821 BABAM1Q9NWV8 329 aa18.39■□□□□ 0.53
GGA3-215ENST00000582821 MIS18AQ9NYP9 233 aa18.39■□□□□ 0.53
GGA3-215ENST00000582821 NARFQ9UHQ1 456 aa18.39■□□□□ 0.53
GGA3-215ENST00000582821 USP16Q9Y5T5 823 aa18.39■□□□□ 0.53
GGA3-215ENST00000582821 MMP10P09238 476 aa18.38■□□□□ 0.53
GGA3-215ENST00000582821 CANXP27824 592 aaKnown RBP18.38■□□□□ 0.53
GGA3-215ENST00000582821 IL6STP40189 918 aaPredicted RBP18.38■□□□□ 0.53
GGA3-215ENST00000582821 A0A087WZG4 1122 aa18.37■□□□□ 0.53
GGA3-215ENST00000582821 ZPR1O75312 459 aa18.37■□□□□ 0.53
GGA3-215ENST00000582821 CCDC184Q52MB2 194 aa18.37■□□□□ 0.53
GGA3-215ENST00000582821 SRP68Q9UHB9 627 aaKnown RBP18.37■□□□□ 0.53
GGA3-215ENST00000582821 COL15A1P39059 1388 aa18.37■□□□□ 0.53
GGA3-215ENST00000582821 KDM3BQ7LBC6 1761 aa18.37■□□□□ 0.53
GGA3-215ENST00000582821 A1BGP04217 495 aa18.36■□□□□ 0.53
GGA3-215ENST00000582821 EIF4A1P60842 406 aaKnown RBP18.36■□□□□ 0.53
GGA3-215ENST00000582821 KLHL34Q8N239 644 aa18.36■□□□□ 0.53
GGA3-215ENST00000582821 TRIM35Q9UPQ4 493 aa18.36■□□□□ 0.53
GGA3-215ENST00000582821 PRAMEF22A3QJZ6 481 aa18.35■□□□□ 0.53
GGA3-215ENST00000582821 TM4SF1P30408 202 aa18.35■□□□□ 0.53
GGA3-215ENST00000582821 FKBP8Q14318 412 aa18.35■□□□□ 0.53
GGA3-215ENST00000582821 USPL1Q5W0Q7 1092 aa18.35■□□□□ 0.53
GGA3-215ENST00000582821 NLGN2Q8NFZ4 835 aa18.35■□□□□ 0.53
GGA3-215ENST00000582821 RRP7AQ9Y3A4 280 aaKnown RBP18.35■□□□□ 0.53
GGA3-215ENST00000582821 GIGYF1O75420 1035 aaPredicted RBP18.34■□□□□ 0.53
GGA3-215ENST00000582821 NEUROD2Q15784 382 aa18.34■□□□□ 0.53
GGA3-215ENST00000582821 UTRNP46939 3433 aa18.33■□□□□ 0.52
GGA3-215ENST00000582821 BCL2L12Q9HB09 334 aa18.33■□□□□ 0.52
GGA3-215ENST00000582821 PARP3Q9Y6F1 533 aa18.33■□□□□ 0.52
GGA3-215ENST00000582821 GOLGB1Q14789 3259 aaKnown RBP18.33■□□□□ 0.52
GGA3-215ENST00000582821 KIF13BQ9NQT8 1826 aa18.33■□□□□ 0.52
GGA3-215ENST00000582821 TSPYL4Q9UJ04 414 aa18.32■□□□□ 0.52
GGA3-215ENST00000582821 CHL1O00533 1208 aa18.31■□□□□ 0.52
GGA3-215ENST00000582821 APAF1O14727 1248 aa18.31■□□□□ 0.52
GGA3-215ENST00000582821 NBPF26B4DH59 902 aa18.3■□□□□ 0.52
GGA3-215ENST00000582821 DDR1Q08345 913 aa18.3■□□□□ 0.52
GGA3-215ENST00000582821 NBPF10Q6P3W6 841 aaKnown RBP18.3■□□□□ 0.52
GGA3-215ENST00000582821 NPM2Q86SE8 214 aaKnown RBP18.3■□□□□ 0.52
GGA3-215ENST00000582821 NBPF15Q8N660 670 aa18.3■□□□□ 0.52
GGA3-215ENST00000582821 MRS2Q9HD23 443 aa18.3■□□□□ 0.52
GGA3-215ENST00000582821 POLRMTO00411 1230 aaKnown RBP18.29■□□□□ 0.52
GGA3-215ENST00000582821 TGFB2P61812 414 aa18.29■□□□□ 0.52
GGA3-215ENST00000582821 NFIXQ14938 502 aa18.29■□□□□ 0.52
GGA3-215ENST00000582821 GPR162Q16538 588 aa18.29■□□□□ 0.52
GGA3-215ENST00000582821 TBC1D2BQ9UPU7 963 aa18.29■□□□□ 0.52
GGA3-215ENST00000582821 LAMB4A4D0S4 1761 aa18.28■□□□□ 0.52
GGA3-215ENST00000582821 RGL2O15211 777 aa18.28■□□□□ 0.52
GGA3-215ENST00000582821 C10orf71Q711Q0 1435 aa18.28■□□□□ 0.52
GGA3-215ENST00000582821 CAMTA2O94983 1202 aa18.27■□□□□ 0.52
GGA3-215ENST00000582821 DZIP3Q86Y13 1208 aaKnown RBP18.27■□□□□ 0.52
GGA3-215ENST00000582821 CFAP44Q96MT7 982 aa18.27■□□□□ 0.52
GGA3-215ENST00000582821 ZNF330Q9Y3S2 320 aaPredicted RBP18.27■□□□□ 0.52
GGA3-215ENST00000582821 CHD4Q14839 1912 aa18.27■□□□□ 0.51
GGA3-215ENST00000582821 PIP4K2AP48426 406 aaPredicted RBP18.26■□□□□ 0.51
GGA3-215ENST00000582821 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
GGA3-215ENST00000582821 CLEC4GQ6UXB4 293 aa18.26■□□□□ 0.51
GGA3-215ENST00000582821 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
GGA3-215ENST00000582821 ERBB4Q15303 1308 aa18.25■□□□□ 0.51
GGA3-215ENST00000582821 GRIN3BO60391 1043 aa18.25■□□□□ 0.51
GGA3-215ENST00000582821 ZNF853P0CG23 659 aa18.25■□□□□ 0.51
GGA3-215ENST00000582821 NRXN2Q9P2S2 1712 aa18.25■□□□□ 0.51
GGA3-215ENST00000582821 SCN7AQ01118 1682 aa18.25■□□□□ 0.51
GGA3-215ENST00000582821 KIAA1551Q9HCM1 1747 aa18.24■□□□□ 0.51
GGA3-215ENST00000582821 SERPINB2P05120 415 aa18.24■□□□□ 0.51
GGA3-215ENST00000582821 YBX3P16989 372 aaKnown RBP eCLIP18.24■□□□□ 0.51
GGA3-215ENST00000582821 CALD1Q05682 793 aaKnown RBP18.24■□□□□ 0.51
GGA3-215ENST00000582821 TBC1D9BQ66K14 1250 aa18.24■□□□□ 0.51
GGA3-215ENST00000582821 PXDNLA1KZ92 1463 aa18.23■□□□□ 0.51
GGA3-215ENST00000582821 CCDC27Q2M243 656 aa18.23■□□□□ 0.51
GGA3-215ENST00000582821 BCORQ6W2J9 1755 aa18.22■□□□□ 0.51
GGA3-215ENST00000582821 GNAI1P63096 354 aa18.22■□□□□ 0.51
GGA3-215ENST00000582821 PELP1Q8IZL8 1130 aaKnown RBP18.22■□□□□ 0.51
GGA3-215ENST00000582821 IFT57Q9NWB7 429 aa18.22■□□□□ 0.51
GGA3-215ENST00000582821 LAS1LQ9Y4W2 734 aaKnown RBP18.22■□□□□ 0.51
GGA3-215ENST00000582821 N4BP2Q86UW6 1770 aaPredicted RBP18.22■□□□□ 0.51
GGA3-215ENST00000582821 A0A0G2JLW4 131 aa18.21■□□□□ 0.51
GGA3-215ENST00000582821 HOXB7P09629 217 aa18.21■□□□□ 0.51
GGA3-215ENST00000582821 DPEP1P16444 411 aa18.21■□□□□ 0.51
GGA3-215ENST00000582821 KCNA3P22001 575 aa18.21■□□□□ 0.51
GGA3-215ENST00000582821 PDIA6Q15084 440 aa18.21■□□□□ 0.51
GGA3-215ENST00000582821 SETDB2Q96T68 719 aa18.21■□□□□ 0.51
GGA3-215ENST00000582821 ZNF652Q9Y2D9 606 aa18.21■□□□□ 0.51
GGA3-215ENST00000582821 ERVV-1B6SEH8 477 aa18.2■□□□□ 0.5
GGA3-215ENST00000582821 YY1P25490 414 aa18.2■□□□□ 0.5
GGA3-215ENST00000582821 BICDL1Q6ZP65 573 aa18.2■□□□□ 0.5
GGA3-215ENST00000582821 LRP10Q7Z4F1 713 aa18.2■□□□□ 0.5
GGA3-215ENST00000582821 MBIPQ9NS73 344 aa18.2■□□□□ 0.5
GGA3-215ENST00000582821 CARMIL3Q8ND23 1372 aa18.19■□□□□ 0.5
GGA3-215ENST00000582821 EIF2S2P20042 333 aaKnown RBP18.19■□□□□ 0.5
GGA3-215ENST00000582821 BRCA1P38398 1863 aaKnown RBP18.19■□□□□ 0.5
GGA3-215ENST00000582821 WWC1Q8IX03 1113 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms