RNA–Protein interactions for RNA: ENST00000582481.1

SNX11-211, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-211ENST00000582481 ABHD8Q96I13 439 aa12.86□□□□□ -0.35
SNX11-211ENST00000582481 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.86□□□□□ -0.35
SNX11-211ENST00000582481 TM4SF1P30408 202 aa12.85□□□□□ -0.35
SNX11-211ENST00000582481 SPG7Q9UQ90 795 aa12.85□□□□□ -0.35
SNX11-211ENST00000582481 PASKQ96RG2 1323 aa12.85□□□□□ -0.35
SNX11-211ENST00000582481 THSD7BQ9C0I4 1608 aa12.84□□□□□ -0.35
SNX11-211ENST00000582481 ADAMTSL1Q8N6G6 1762 aa12.84□□□□□ -0.35
SNX11-211ENST00000582481 EYA1Q99502 592 aa12.84□□□□□ -0.35
SNX11-211ENST00000582481 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
SNX11-211ENST00000582481 WBP1LQ9NX94 342 aa12.84□□□□□ -0.35
SNX11-211ENST00000582481 HSPA8P11142 646 aaKnown RBP12.83□□□□□ -0.36
SNX11-211ENST00000582481 CTCFP49711 727 aaPredicted RBP12.83□□□□□ -0.36
SNX11-211ENST00000582481 VEGFBP49765 207 aa12.83□□□□□ -0.36
SNX11-211ENST00000582481 LBX1P52954 281 aa12.83□□□□□ -0.36
SNX11-211ENST00000582481 IFNL2Q8IZJ0 200 aa12.83□□□□□ -0.36
SNX11-211ENST00000582481 NPM3O75607 178 aaKnown RBP12.82□□□□□ -0.36
SNX11-211ENST00000582481 CRKLP46109 303 aaKnown RBP12.82□□□□□ -0.36
SNX11-211ENST00000582481 CHADLQ6NUI6 762 aa12.82□□□□□ -0.36
SNX11-211ENST00000582481 RGS19P49795 217 aa12.81□□□□□ -0.36
SNX11-211ENST00000582481 INTS5Q6P9B9 1019 aaKnown RBP12.81□□□□□ -0.36
SNX11-211ENST00000582481 NEUROD1Q13562 356 aa12.8□□□□□ -0.36
SNX11-211ENST00000582481 BCL2L12Q9HB09 334 aa12.8□□□□□ -0.36
SNX11-211ENST00000582481 WASHC2AQ641Q2 1341 aa12.8□□□□□ -0.36
SNX11-211ENST00000582481 ST20-MTHFSA0A0A6YYL1 179 aa12.79□□□□□ -0.36
SNX11-211ENST00000582481 ERVV-2B6SEH9 535 aa12.79□□□□□ -0.36
SNX11-211ENST00000582481 NFIXQ14938 502 aa12.79□□□□□ -0.36
SNX11-211ENST00000582481 LTBP1Q14766 1721 aa12.79□□□□□ -0.36
SNX11-211ENST00000582481 SCN4AP35499 1836 aa12.78□□□□□ -0.36
SNX11-211ENST00000582481 ITGBL1O95965 494 aaPredicted RBP12.78□□□□□ -0.36
SNX11-211ENST00000582481 USPL1Q5W0Q7 1092 aa12.78□□□□□ -0.36
SNX11-211ENST00000582481 CARD14Q9BXL6 1004 aa12.78□□□□□ -0.36
SNX11-211ENST00000582481 SOS1Q07889 1333 aaPredicted RBP12.78□□□□□ -0.36
SNX11-211ENST00000582481 CACNA1SQ13698 1873 aa12.78□□□□□ -0.36
SNX11-211ENST00000582481 SCN11AQ9UI33 1791 aa12.77□□□□□ -0.36
SNX11-211ENST00000582481 ARFGEF2Q9Y6D5 1785 aa12.77□□□□□ -0.36
SNX11-211ENST00000582481 SLX4Q8IY92 1834 aa12.77□□□□□ -0.37
SNX11-211ENST00000582481 PTCD1O75127 700 aaKnown RBP12.77□□□□□ -0.37
SNX11-211ENST00000582481 DDNO94850 711 aaPredicted RBP12.77□□□□□ -0.37
SNX11-211ENST00000582481 TTLL6Q8N841 843 aa12.77□□□□□ -0.37
SNX11-211ENST00000582481 MLLT1Q03111 559 aaPredicted RBP12.76□□□□□ -0.37
SNX11-211ENST00000582481 RASSF10A6NK89 507 aa12.75□□□□□ -0.37
SNX11-211ENST00000582481 EIF4A2Q14240 407 aaKnown RBP12.75□□□□□ -0.37
SNX11-211ENST00000582481 C2CD5Q86YS7 1000 aa12.75□□□□□ -0.37
SNX11-211ENST00000582481 AIDAQ96BJ3 306 aa12.75□□□□□ -0.37
SNX11-211ENST00000582481 SCN7AQ01118 1682 aa12.74□□□□□ -0.37
SNX11-211ENST00000582481 ERFEQ4G0M1 354 aa12.74□□□□□ -0.37
SNX11-211ENST00000582481 POLKQ9UBT6 870 aa12.74□□□□□ -0.37
SNX11-211ENST00000582481 COL15A1P39059 1388 aa12.73□□□□□ -0.37
SNX11-211ENST00000582481 LTBP3Q9NS15 1303 aa12.73□□□□□ -0.37
SNX11-211ENST00000582481 TMEM88BA6NKF7 163 aa12.73□□□□□ -0.37
SNX11-211ENST00000582481 PPM1GO15355 546 aaPredicted RBP12.73□□□□□ -0.37
SNX11-211ENST00000582481 SERPINB2P05120 415 aa12.73□□□□□ -0.37
SNX11-211ENST00000582481 DPY19L2Q6NUT2 758 aa12.73□□□□□ -0.37
SNX11-211ENST00000582481 LDHDQ86WU2 507 aa12.73□□□□□ -0.37
SNX11-211ENST00000582481 DNAJC10Q8IXB1 793 aa12.73□□□□□ -0.37
SNX11-211ENST00000582481 L3MBTL3Q96JM7 780 aaPredicted RBP12.73□□□□□ -0.37
SNX11-211ENST00000582481 TAF1DQ9H5J8 278 aaPredicted RBP12.73□□□□□ -0.37
SNX11-211ENST00000582481 C21orf2O43822 256 aa12.72□□□□□ -0.37
SNX11-211ENST00000582481 KCNA4P22459 653 aa12.72□□□□□ -0.37
SNX11-211ENST00000582481 CABP4P57796 275 aa12.72□□□□□ -0.37
SNX11-211ENST00000582481 NARFQ9UHQ1 456 aa12.72□□□□□ -0.37
SNX11-211ENST00000582481 MRC1P22897 1456 aa12.72□□□□□ -0.37
SNX11-211ENST00000582481 UBR2Q8IWV8 1755 aa12.71□□□□□ -0.37
SNX11-211ENST00000582481 CCDC85CA6NKD9 419 aa12.71□□□□□ -0.37
SNX11-211ENST00000582481 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
SNX11-211ENST00000582481 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.37
SNX11-211ENST00000582481 ZBTB1Q9Y2K1 713 aa12.71□□□□□ -0.37
SNX11-211ENST00000582481 CASP8AP2Q9UKL3 1982 aa12.7□□□□□ -0.38
SNX11-211ENST00000582481 CYP19A1P11511 503 aaPredicted RBP12.7□□□□□ -0.38
SNX11-211ENST00000582481 CACNB1Q02641 598 aaPredicted RBP12.7□□□□□ -0.38
SNX11-211ENST00000582481 ZNF530Q6P9A1 599 aaPredicted RBP12.7□□□□□ -0.38
SNX11-211ENST00000582481 WDR33Q9C0J8 1336 aaKnown RBP12.69□□□□□ -0.38
SNX11-211ENST00000582481 ZNF541Q9H0D2 1346 aa12.69□□□□□ -0.38
SNX11-211ENST00000582481 H0YIN7 160 aa12.69□□□□□ -0.38
SNX11-211ENST00000582481 ZPR1O75312 459 aa12.69□□□□□ -0.38
SNX11-211ENST00000582481 HSP90AB1P08238 724 aaKnown RBP12.69□□□□□ -0.38
SNX11-211ENST00000582481 AEBP1Q8IUX7 1158 aa12.69□□□□□ -0.38
SNX11-211ENST00000582481 CCDC24Q8N4L8 307 aa12.69□□□□□ -0.38
SNX11-211ENST00000582481 FMR1Q06787 632 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNX11-211ENST00000582481 TAOK3Q9H2K8 898 aa12.68□□□□□ -0.38
SNX11-211ENST00000582481 COL4A5P29400 1685 aa12.67□□□□□ -0.38
SNX11-211ENST00000582481 DEFB115Q30KQ5 88 aa12.67□□□□□ -0.38
SNX11-211ENST00000582481 MAP1SQ66K74 1059 aaPredicted RBP12.67□□□□□ -0.38
SNX11-211ENST00000582481 PRR5LQ6MZQ0 368 aa12.67□□□□□ -0.38
SNX11-211ENST00000582481 TSKSQ9UJT2 592 aa12.67□□□□□ -0.38
SNX11-211ENST00000582481 TRPM7Q96QT4 1865 aa12.66□□□□□ -0.38
SNX11-211ENST00000582481 MAP2K1Q02750 393 aaPredicted RBP12.66□□□□□ -0.38
SNX11-211ENST00000582481 C7orf43Q8WVR3 580 aa12.66□□□□□ -0.38
SNX11-211ENST00000582481 BCORQ6W2J9 1755 aa12.66□□□□□ -0.38
SNX11-211ENST00000582481 SNED1Q8TER0 1413 aa12.65□□□□□ -0.38
SNX11-211ENST00000582481 IQCA1LA6NCM1 817 aa12.65□□□□□ -0.38
SNX11-211ENST00000582481 MTHFSP49914 203 aa12.65□□□□□ -0.38
SNX11-211ENST00000582481 PLEKHO1Q53GL0 409 aaPredicted RBP12.65□□□□□ -0.38
SNX11-211ENST00000582481 EAPPQ56P03 285 aaPredicted RBP12.65□□□□□ -0.38
SNX11-211ENST00000582481 TBC1D9BQ66K14 1250 aa12.65□□□□□ -0.38
SNX11-211ENST00000582481 ZNF622Q969S3 477 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNX11-211ENST00000582481 MCOLN1Q9GZU1 580 aa12.65□□□□□ -0.38
SNX11-211ENST00000582481 SLC39A6Q13433 755 aa12.64□□□□□ -0.39
SNX11-211ENST00000582481 PRPF40BQ6NWY9 871 aaKnown RBP12.64□□□□□ -0.39
SNX11-211ENST00000582481 BICDL1Q6ZP65 573 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms