RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 TMPOP42166 694 aaKnown RBP13.56□□□□□ -0.24
PPP4R1-220ENST00000581835 NLGN2Q8NFZ4 835 aa13.56□□□□□ -0.24
PPP4R1-220ENST00000581835 SRP68Q9UHB9 627 aaKnown RBP13.56□□□□□ -0.24
PPP4R1-220ENST00000581835 ADAMTS8Q9UP79 889 aa13.56□□□□□ -0.24
PPP4R1-220ENST00000581835 USP42Q9H9J4 1324 aaKnown RBP13.56□□□□□ -0.24
PPP4R1-220ENST00000581835 MMP10P09238 476 aa13.55□□□□□ -0.24
PPP4R1-220ENST00000581835 RIPK4P57078 832 aa13.55□□□□□ -0.24
PPP4R1-220ENST00000581835 CCDC146Q8IYE0 955 aa13.55□□□□□ -0.24
PPP4R1-220ENST00000581835 THUMPD2Q9BTF0 503 aaKnown RBP13.55□□□□□ -0.24
PPP4R1-220ENST00000581835 MIS18AQ9NYP9 233 aa13.55□□□□□ -0.24
PPP4R1-220ENST00000581835 CD2APQ9Y5K6 639 aa13.55□□□□□ -0.24
PPP4R1-220ENST00000581835 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
PPP4R1-220ENST00000581835 CANXP27824 592 aaKnown RBP13.54□□□□□ -0.24
PPP4R1-220ENST00000581835 EIF5P55010 431 aaKnown RBP13.54□□□□□ -0.24
PPP4R1-220ENST00000581835 RUNDC1Q96C34 613 aa13.54□□□□□ -0.24
PPP4R1-220ENST00000581835 USP16Q9Y5T5 823 aa13.54□□□□□ -0.24
PPP4R1-220ENST00000581835 COL15A1P39059 1388 aa13.54□□□□□ -0.24
PPP4R1-220ENST00000581835 PRAMEF22A3QJZ6 481 aa13.53□□□□□ -0.24
PPP4R1-220ENST00000581835 ZPR1O75312 459 aa13.53□□□□□ -0.24
PPP4R1-220ENST00000581835 SNRPA1P09661 255 aaKnown RBP13.53□□□□□ -0.24
PPP4R1-220ENST00000581835 FKBP8Q14318 412 aa13.53□□□□□ -0.24
PPP4R1-220ENST00000581835 USPL1Q5W0Q7 1092 aa13.53□□□□□ -0.24
PPP4R1-220ENST00000581835 PNISRQ8TF01 805 aaKnown RBP13.53□□□□□ -0.24
PPP4R1-220ENST00000581835 NARFQ9UHQ1 456 aa13.53□□□□□ -0.24
PPP4R1-220ENST00000581835 KIF13BQ9NQT8 1826 aa13.53□□□□□ -0.24
PPP4R1-220ENST00000581835 A1BGP04217 495 aa13.52□□□□□ -0.25
PPP4R1-220ENST00000581835 RRP7AQ9Y3A4 280 aaKnown RBP13.52□□□□□ -0.25
PPP4R1-220ENST00000581835 CHD4Q14839 1912 aa13.52□□□□□ -0.25
PPP4R1-220ENST00000581835 IL6STP40189 918 aaPredicted RBP13.51□□□□□ -0.25
PPP4R1-220ENST00000581835 LMOD3Q0VAK6 560 aa13.51□□□□□ -0.25
PPP4R1-220ENST00000581835 NEUROD2Q15784 382 aa13.51□□□□□ -0.25
PPP4R1-220ENST00000581835 CCDC184Q52MB2 194 aa13.51□□□□□ -0.25
PPP4R1-220ENST00000581835 PARP3Q9Y6F1 533 aa13.51□□□□□ -0.25
PPP4R1-220ENST00000581835 ANP32CO43423 234 aa13.5□□□□□ -0.25
PPP4R1-220ENST00000581835 TM4SF1P30408 202 aa13.5□□□□□ -0.25
PPP4R1-220ENST00000581835 EIF4A1P60842 406 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-220ENST00000581835 GPR162Q16538 588 aa13.5□□□□□ -0.25
PPP4R1-220ENST00000581835 BCL2L12Q9HB09 334 aa13.5□□□□□ -0.25
PPP4R1-220ENST00000581835 AFDNP55196 1824 aaKnown RBP13.49□□□□□ -0.25
PPP4R1-220ENST00000581835 A0A087WZG4 1122 aa13.49□□□□□ -0.25
PPP4R1-220ENST00000581835 DDR1Q08345 913 aa13.49□□□□□ -0.25
PPP4R1-220ENST00000581835 TRIM35Q9UPQ4 493 aa13.49□□□□□ -0.25
PPP4R1-220ENST00000581835 ZNF330Q9Y3S2 320 aaPredicted RBP13.49□□□□□ -0.25
PPP4R1-220ENST00000581835 LAMB4A4D0S4 1761 aa13.49□□□□□ -0.25
PPP4R1-220ENST00000581835 N4BP2Q86UW6 1770 aaPredicted RBP13.48□□□□□ -0.25
PPP4R1-220ENST00000581835 KIAA1551Q9HCM1 1747 aa13.48□□□□□ -0.25
PPP4R1-220ENST00000581835 POLRMTO00411 1230 aaKnown RBP13.48□□□□□ -0.25
PPP4R1-220ENST00000581835 GIGYF1O75420 1035 aaPredicted RBP13.48□□□□□ -0.25
PPP4R1-220ENST00000581835 PIP4K2AP48426 406 aaPredicted RBP13.48□□□□□ -0.25
PPP4R1-220ENST00000581835 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
PPP4R1-220ENST00000581835 BABAM1Q9NWV8 329 aa13.48□□□□□ -0.25
PPP4R1-220ENST00000581835 TSPYL4Q9UJ04 414 aa13.48□□□□□ -0.25
PPP4R1-220ENST00000581835 TBC1D2BQ9UPU7 963 aa13.48□□□□□ -0.25
PPP4R1-220ENST00000581835 C10orf71Q711Q0 1435 aa13.47□□□□□ -0.25
PPP4R1-220ENST00000581835 NBPF26B4DH59 902 aa13.47□□□□□ -0.25
PPP4R1-220ENST00000581835 YBX3P16989 372 aaKnown RBP eCLIP13.47□□□□□ -0.25
PPP4R1-220ENST00000581835 NFIXQ14938 502 aa13.47□□□□□ -0.25
PPP4R1-220ENST00000581835 NBPF10Q6P3W6 841 aaKnown RBP13.47□□□□□ -0.25
PPP4R1-220ENST00000581835 NPM2Q86SE8 214 aaKnown RBP13.47□□□□□ -0.25
PPP4R1-220ENST00000581835 NBPF15Q8N660 670 aa13.47□□□□□ -0.25
PPP4R1-220ENST00000581835 SCN7AQ01118 1682 aa13.47□□□□□ -0.25
PPP4R1-220ENST00000581835 BCORQ6W2J9 1755 aa13.46□□□□□ -0.25
PPP4R1-220ENST00000581835 APAF1O14727 1248 aa13.46□□□□□ -0.25
PPP4R1-220ENST00000581835 TGFB2P61812 414 aa13.46□□□□□ -0.25
PPP4R1-220ENST00000581835 NRXN2Q9P2S2 1712 aa13.46□□□□□ -0.25
PPP4R1-220ENST00000581835 PXDNLA1KZ92 1463 aa13.45□□□□□ -0.26
PPP4R1-220ENST00000581835 CAMTA2O94983 1202 aa13.45□□□□□ -0.26
PPP4R1-220ENST00000581835 YY1P25490 414 aa13.45□□□□□ -0.26
PPP4R1-220ENST00000581835 DZIP3Q86Y13 1208 aaKnown RBP13.45□□□□□ -0.26
PPP4R1-220ENST00000581835 BRCA1P38398 1863 aaKnown RBP13.44□□□□□ -0.26
PPP4R1-220ENST00000581835 CHL1O00533 1208 aa13.44□□□□□ -0.26
PPP4R1-220ENST00000581835 GRIN3BO60391 1043 aa13.44□□□□□ -0.26
PPP4R1-220ENST00000581835 TBC1D9BQ66K14 1250 aa13.44□□□□□ -0.26
PPP4R1-220ENST00000581835 MRS2Q9HD23 443 aa13.44□□□□□ -0.26
PPP4R1-220ENST00000581835 A0A0G2JLW4 131 aa13.43□□□□□ -0.26
PPP4R1-220ENST00000581835 SERPINB2P05120 415 aa13.43□□□□□ -0.26
PPP4R1-220ENST00000581835 BICDL1Q6ZP65 573 aa13.43□□□□□ -0.26
PPP4R1-220ENST00000581835 WWC3Q9ULE0 1092 aa13.43□□□□□ -0.26
PPP4R1-220ENST00000581835 LAS1LQ9Y4W2 734 aaKnown RBP13.43□□□□□ -0.26
PPP4R1-220ENST00000581835 DPEP1P16444 411 aa13.42□□□□□ -0.26
PPP4R1-220ENST00000581835 CLEC4GQ6UXB4 293 aa13.42□□□□□ -0.26
PPP4R1-220ENST00000581835 CFAP44Q96MT7 982 aa13.42□□□□□ -0.26
PPP4R1-220ENST00000581835 NUP98P52948 1817 aa13.41□□□□□ -0.26
PPP4R1-220ENST00000581835 KCNA3P22001 575 aa13.41□□□□□ -0.26
PPP4R1-220ENST00000581835 ERBB4Q15303 1308 aa13.4□□□□□ -0.26
PPP4R1-220ENST00000581835 RGL2O15211 777 aa13.4□□□□□ -0.26
PPP4R1-220ENST00000581835 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
PPP4R1-220ENST00000581835 MYL6BP14649 208 aa13.4□□□□□ -0.26
PPP4R1-220ENST00000581835 EIF2S2P20042 333 aaKnown RBP13.4□□□□□ -0.26
PPP4R1-220ENST00000581835 KRT24Q2M2I5 525 aa13.4□□□□□ -0.26
PPP4R1-220ENST00000581835 NGEFQ8N5V2 710 aa13.4□□□□□ -0.26
PPP4R1-220ENST00000581835 SETDB2Q96T68 719 aa13.4□□□□□ -0.26
PPP4R1-220ENST00000581835 CARMIL3Q8ND23 1372 aa13.4□□□□□ -0.26
PPP4R1-220ENST00000581835 ANKRD31Q8N7Z5 1873 aa13.4□□□□□ -0.26
PPP4R1-220ENST00000581835 ARFGEF1Q9Y6D6 1849 aa13.39□□□□□ -0.27
PPP4R1-220ENST00000581835 PDIA6Q15084 440 aa13.39□□□□□ -0.27
PPP4R1-220ENST00000581835 ZNF652Q9Y2D9 606 aa13.39□□□□□ -0.27
PPP4R1-220ENST00000581835 CHRNA5P30532 468 aa13.38□□□□□ -0.27
PPP4R1-220ENST00000581835 CALD1Q05682 793 aaKnown RBP13.38□□□□□ -0.27
PPP4R1-220ENST00000581835 HLFQ16534 295 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms