RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 HMGB2P26583 209 aaKnown RBP17.61■□□□□ 0.41
CSNK1D-220ENST00000581737 PXDNLA1KZ92 1463 aa17.61■□□□□ 0.41
CSNK1D-220ENST00000581737 GNPATO15228 680 aa17.6■□□□□ 0.41
CSNK1D-220ENST00000581737 CALD1Q05682 793 aaKnown RBP17.6■□□□□ 0.41
CSNK1D-220ENST00000581737 CICQ96RK0 1608 aaPredicted RBP17.6■□□□□ 0.41
CSNK1D-220ENST00000581737 MMP10P09238 476 aa17.59■□□□□ 0.41
CSNK1D-220ENST00000581737 DCTN1Q14203 1278 aa17.59■□□□□ 0.41
CSNK1D-220ENST00000581737 KIAA1551Q9HCM1 1747 aa17.58■□□□□ 0.41
CSNK1D-220ENST00000581737 PCNTO95613 3336 aa17.58■□□□□ 0.41
CSNK1D-220ENST00000581737 A0A0G2JLW4 131 aa17.58■□□□□ 0.4
CSNK1D-220ENST00000581737 ATP6V1AP38606 617 aa17.58■□□□□ 0.4
CSNK1D-220ENST00000581737 CCDC27Q2M243 656 aa17.58■□□□□ 0.4
CSNK1D-220ENST00000581737 SLC4A9Q96Q91 983 aa17.58■□□□□ 0.4
CSNK1D-220ENST00000581737 ATG3Q9NT62 314 aa17.58■□□□□ 0.4
CSNK1D-220ENST00000581737 ZNF831Q5JPB2 1677 aa17.58■□□□□ 0.4
CSNK1D-220ENST00000581737 TAF7Q15545 349 aaPredicted RBP17.57■□□□□ 0.4
CSNK1D-220ENST00000581737 TTC5Q8N0Z6 440 aa17.57■□□□□ 0.4
CSNK1D-220ENST00000581737 NMRK2Q9NPI5 230 aa17.57■□□□□ 0.4
CSNK1D-220ENST00000581737 TRIM35Q9UPQ4 493 aa17.57■□□□□ 0.4
CSNK1D-220ENST00000581737 UBR2Q8IWV8 1755 aa17.57■□□□□ 0.4
CSNK1D-220ENST00000581737 BTBD11A6QL63 1104 aa17.56■□□□□ 0.4
CSNK1D-220ENST00000581737 HTRA3P83110 453 aa17.56■□□□□ 0.4
CSNK1D-220ENST00000581737 THUMPD2Q9BTF0 503 aaKnown RBP17.56■□□□□ 0.4
CSNK1D-220ENST00000581737 BCS1LQ9Y276 419 aa17.56■□□□□ 0.4
CSNK1D-220ENST00000581737 GTF3C3Q9Y5Q9 886 aa17.56■□□□□ 0.4
CSNK1D-220ENST00000581737 KDM3BQ7LBC6 1761 aa17.56■□□□□ 0.4
CSNK1D-220ENST00000581737 NEFLP07196 543 aa17.55■□□□□ 0.4
CSNK1D-220ENST00000581737 APLP1P51693 650 aa17.55■□□□□ 0.4
CSNK1D-220ENST00000581737 BABAM1Q9NWV8 329 aa17.55■□□□□ 0.4
CSNK1D-220ENST00000581737 TOMM70O94826 608 aa17.54■□□□□ 0.4
CSNK1D-220ENST00000581737 DPEP1P16444 411 aa17.54■□□□□ 0.4
CSNK1D-220ENST00000581737 ZNF790Q6PG37 636 aa17.54■□□□□ 0.4
CSNK1D-220ENST00000581737 KCPQ6ZWJ8 1503 aa17.53■□□□□ 0.4
CSNK1D-220ENST00000581737 ARHGAP27Q6ZUM4 889 aa17.53■□□□□ 0.4
CSNK1D-220ENST00000581737 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
CSNK1D-220ENST00000581737 C10orf71Q711Q0 1435 aa17.53■□□□□ 0.4
CSNK1D-220ENST00000581737 PTCD1O75127 700 aaKnown RBP17.52■□□□□ 0.4
CSNK1D-220ENST00000581737 KCNA3P22001 575 aa17.52■□□□□ 0.4
CSNK1D-220ENST00000581737 TGFB2P61812 414 aa17.52■□□□□ 0.4
CSNK1D-220ENST00000581737 SLC39A6Q13433 755 aa17.52■□□□□ 0.4
CSNK1D-220ENST00000581737 N4BP2Q86UW6 1770 aaPredicted RBP17.52■□□□□ 0.4
CSNK1D-220ENST00000581737 TRAPPC3LQ5T215 181 aa17.51■□□□□ 0.39
CSNK1D-220ENST00000581737 WWC1Q8IX03 1113 aa17.51■□□□□ 0.39
CSNK1D-220ENST00000581737 ARHGEF1Q92888 912 aaKnown RBP17.51■□□□□ 0.39
CSNK1D-220ENST00000581737 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
CSNK1D-220ENST00000581737 TSPYL4Q9UJ04 414 aa17.51■□□□□ 0.39
CSNK1D-220ENST00000581737 IL16Q14005 1332 aa17.5■□□□□ 0.39
CSNK1D-220ENST00000581737 GYS1P13807 737 aa17.5■□□□□ 0.39
CSNK1D-220ENST00000581737 GNAI1P63096 354 aa17.5■□□□□ 0.39
CSNK1D-220ENST00000581737 VSIG10Q8N0Z9 540 aa17.5■□□□□ 0.39
CSNK1D-220ENST00000581737 IFT57Q9NWB7 429 aa17.5■□□□□ 0.39
CSNK1D-220ENST00000581737 COL5A3P25940 1745 aaPredicted RBP17.5■□□□□ 0.39
CSNK1D-220ENST00000581737 TJP1Q07157 1748 aa17.5■□□□□ 0.39
CSNK1D-220ENST00000581737 KIF13BQ9NQT8 1826 aa17.49■□□□□ 0.39
CSNK1D-220ENST00000581737 WDR63Q8IWG1 891 aa17.49■□□□□ 0.39
CSNK1D-220ENST00000581737 CFAP44Q96MT7 982 aa17.49■□□□□ 0.39
CSNK1D-220ENST00000581737 RTCBQ9Y3I0 505 aaKnown RBP17.49■□□□□ 0.39
CSNK1D-220ENST00000581737 HEG1Q9ULI3 1381 aa17.49■□□□□ 0.39
CSNK1D-220ENST00000581737 CHL1O00533 1208 aa17.48■□□□□ 0.39
CSNK1D-220ENST00000581737 COL13A1Q5TAT6 717 aaPredicted RBP17.48■□□□□ 0.39
CSNK1D-220ENST00000581737 C9orf131Q5VYM1 1079 aa17.48■□□□□ 0.39
CSNK1D-220ENST00000581737 NLGN1Q8N2Q7 840 aa17.48■□□□□ 0.39
CSNK1D-220ENST00000581737 ZNF496Q96IT1 587 aaPredicted RBP17.48■□□□□ 0.39
CSNK1D-220ENST00000581737 TEX13AQ9BXU3 409 aaPredicted RBP17.48■□□□□ 0.39
CSNK1D-220ENST00000581737 SALL2Q9Y467 1007 aaPredicted RBP17.48■□□□□ 0.39
CSNK1D-220ENST00000581737 LAS1LQ9Y4W2 734 aaKnown RBP17.48■□□□□ 0.39
CSNK1D-220ENST00000581737 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
CSNK1D-220ENST00000581737 LAMB4A4D0S4 1761 aa17.46■□□□□ 0.39
CSNK1D-220ENST00000581737 CCDC87Q9NVE4 849 aa17.46■□□□□ 0.39
CSNK1D-220ENST00000581737 C4AP0C0L4 1744 aa17.46■□□□□ 0.39
CSNK1D-220ENST00000581737 KCNQ3O43525 872 aa17.45■□□□□ 0.38
CSNK1D-220ENST00000581737 STARD3NLO95772 234 aa17.45■□□□□ 0.38
CSNK1D-220ENST00000581737 SNRPA1P09661 255 aaKnown RBP17.45■□□□□ 0.38
CSNK1D-220ENST00000581737 ZNF853P0CG23 659 aa17.45■□□□□ 0.38
CSNK1D-220ENST00000581737 RBM46Q8TBY0 533 aaKnown RBP17.45■□□□□ 0.38
CSNK1D-220ENST00000581737 SRP68Q9UHB9 627 aaKnown RBP17.45■□□□□ 0.38
CSNK1D-220ENST00000581737 CNTNAP4Q9C0A0 1308 aa17.45■□□□□ 0.38
CSNK1D-220ENST00000581737 RPS6KA4O75676 772 aa17.44■□□□□ 0.38
CSNK1D-220ENST00000581737 EIF4A1P60842 406 aaKnown RBP17.44■□□□□ 0.38
CSNK1D-220ENST00000581737 DDR1Q08345 913 aa17.44■□□□□ 0.38
CSNK1D-220ENST00000581737 RC3H1Q5TC82 1133 aaKnown RBP17.44■□□□□ 0.38
CSNK1D-220ENST00000581737 KLRG1Q96E93 195 aa17.44■□□□□ 0.38
CSNK1D-220ENST00000581737 ZNF521Q96K83 1311 aa17.44■□□□□ 0.38
CSNK1D-220ENST00000581737 WDR90Q96KV7 1748 aa17.44■□□□□ 0.38
CSNK1D-220ENST00000581737 RFC4P35249 363 aa17.43■□□□□ 0.38
CSNK1D-220ENST00000581737 FKBP8Q14318 412 aa17.43■□□□□ 0.38
CSNK1D-220ENST00000581737 DNAJC10Q8IXB1 793 aa17.43■□□□□ 0.38
CSNK1D-220ENST00000581737 MYH16Q9H6N6 1097 aa17.43■□□□□ 0.38
CSNK1D-220ENST00000581737 MBIPQ9NS73 344 aa17.43■□□□□ 0.38
CSNK1D-220ENST00000581737 PARP3Q9Y6F1 533 aa17.43■□□□□ 0.38
CSNK1D-220ENST00000581737 ADRA2BP18089 450 aa17.42■□□□□ 0.38
CSNK1D-220ENST00000581737 CHRNA5P30532 468 aa17.42■□□□□ 0.38
CSNK1D-220ENST00000581737 JMYQ8N9B5 988 aa17.42■□□□□ 0.38
CSNK1D-220ENST00000581737 BRCA1P38398 1863 aaKnown RBP17.41■□□□□ 0.38
CSNK1D-220ENST00000581737 GOLGA2Q08379 1002 aa17.41■□□□□ 0.38
CSNK1D-220ENST00000581737 RRAGCQ9HB90 399 aa17.41■□□□□ 0.38
CSNK1D-220ENST00000581737 MYH14Q7Z406 1995 aaKnown RBP17.4■□□□□ 0.38
CSNK1D-220ENST00000581737 CAPN15O75808 1086 aa17.4■□□□□ 0.38
CSNK1D-220ENST00000581737 HOXB7P09629 217 aa17.4■□□□□ 0.38
CSNK1D-220ENST00000581737 CYP19A1P11511 503 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms