RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 ZBTB1Q9Y2K1 713 aa25.83■■□□□ 1.73
SREBF1-220ENST00000581707 YY1P25490 414 aa25.82■■□□□ 1.72
SREBF1-220ENST00000581707 PRKRIP1Q9H875 184 aaPredicted RBP25.82■■□□□ 1.72
SREBF1-220ENST00000581707 USP42Q9H9J4 1324 aaKnown RBP25.82■■□□□ 1.72
SREBF1-220ENST00000581707 GOLGB1Q14789 3259 aaKnown RBP25.8■■□□□ 1.72
SREBF1-220ENST00000581707 ZPR1O75312 459 aa25.8■■□□□ 1.72
SREBF1-220ENST00000581707 CANXP27824 592 aaKnown RBP25.8■■□□□ 1.72
SREBF1-220ENST00000581707 TAF7Q15545 349 aaPredicted RBP25.8■■□□□ 1.72
SREBF1-220ENST00000581707 FKBP8Q14318 412 aa25.79■■□□□ 1.72
SREBF1-220ENST00000581707 PARP3Q9Y6F1 533 aa25.79■■□□□ 1.72
SREBF1-220ENST00000581707 COL15A1P39059 1388 aa25.78■■□□□ 1.72
SREBF1-220ENST00000581707 USPL1Q5W0Q7 1092 aa25.77■■□□□ 1.72
SREBF1-220ENST00000581707 NARFQ9UHQ1 456 aa25.76■■□□□ 1.71
SREBF1-220ENST00000581707 EIF5P55010 431 aaKnown RBP25.75■■□□□ 1.71
SREBF1-220ENST00000581707 MIS18AQ9NYP9 233 aa25.75■■□□□ 1.71
SREBF1-220ENST00000581707 CHD4Q14839 1912 aa25.75■■□□□ 1.71
SREBF1-220ENST00000581707 A1BGP04217 495 aa25.74■■□□□ 1.71
SREBF1-220ENST00000581707 YBX3P16989 372 aaKnown RBP eCLIP25.74■■□□□ 1.71
SREBF1-220ENST00000581707 WDR43Q15061 677 aaKnown RBP eCLIP25.74■■□□□ 1.71
SREBF1-220ENST00000581707 A0A087WZG4 1122 aa25.73■■□□□ 1.71
SREBF1-220ENST00000581707 SNRPA1P09661 255 aaKnown RBP25.73■■□□□ 1.71
SREBF1-220ENST00000581707 PNISRQ8TF01 805 aaKnown RBP25.73■■□□□ 1.71
SREBF1-220ENST00000581707 THUMPD2Q9BTF0 503 aaKnown RBP25.73■■□□□ 1.71
SREBF1-220ENST00000581707 USP16Q9Y5T5 823 aa25.73■■□□□ 1.71
SREBF1-220ENST00000581707 KIF13BQ9NQT8 1826 aa25.72■■□□□ 1.71
SREBF1-220ENST00000581707 ZNF316A6NFI3 1004 aaPredicted RBP25.72■■□□□ 1.71
SREBF1-220ENST00000581707 GRIN3BO60391 1043 aa25.72■■□□□ 1.71
SREBF1-220ENST00000581707 TM4SF1P30408 202 aa25.72■■□□□ 1.71
SREBF1-220ENST00000581707 RIPK4P57078 832 aa25.72■■□□□ 1.71
SREBF1-220ENST00000581707 PRAMEF22A3QJZ6 481 aa25.71■■□□□ 1.71
SREBF1-220ENST00000581707 IL6STP40189 918 aaPredicted RBP25.71■■□□□ 1.71
SREBF1-220ENST00000581707 DDR1Q08345 913 aa25.71■■□□□ 1.71
SREBF1-220ENST00000581707 ZNF330Q9Y3S2 320 aaPredicted RBP25.71■■□□□ 1.71
SREBF1-220ENST00000581707 TMPOP42166 694 aaKnown RBP25.7■■□□□ 1.7
SREBF1-220ENST00000581707 TGFB2P61812 414 aa25.7■■□□□ 1.7
SREBF1-220ENST00000581707 CCDC146Q8IYE0 955 aa25.7■■□□□ 1.7
SREBF1-220ENST00000581707 C10orf71Q711Q0 1435 aa25.7■■□□□ 1.7
SREBF1-220ENST00000581707 NPM2Q86SE8 214 aaKnown RBP25.69■■□□□ 1.7
SREBF1-220ENST00000581707 BCL2L12Q9HB09 334 aa25.69■■□□□ 1.7
SREBF1-220ENST00000581707 ADAMTS8Q9UP79 889 aa25.69■■□□□ 1.7
SREBF1-220ENST00000581707 POLRMTO00411 1230 aaKnown RBP25.68■■□□□ 1.7
SREBF1-220ENST00000581707 RUNDC1Q96C34 613 aa25.68■■□□□ 1.7
SREBF1-220ENST00000581707 KDM3BQ7LBC6 1761 aa25.67■■□□□ 1.7
SREBF1-220ENST00000581707 NFIXQ14938 502 aa25.67■■□□□ 1.7
SREBF1-220ENST00000581707 WWC3Q9ULE0 1092 aa25.67■■□□□ 1.7
SREBF1-220ENST00000581707 A0A0G2JLW4 131 aa25.66■■□□□ 1.7
SREBF1-220ENST00000581707 LMOD3Q0VAK6 560 aa25.66■■□□□ 1.7
SREBF1-220ENST00000581707 TBC1D2BQ9UPU7 963 aa25.66■■□□□ 1.7
SREBF1-220ENST00000581707 N4BP2Q86UW6 1770 aaPredicted RBP25.66■■□□□ 1.7
SREBF1-220ENST00000581707 PXDNLA1KZ92 1463 aa25.66■■□□□ 1.7
SREBF1-220ENST00000581707 RRP7AQ9Y3A4 280 aaKnown RBP25.65■■□□□ 1.7
SREBF1-220ENST00000581707 KIAA1551Q9HCM1 1747 aa25.64■■□□□ 1.7
SREBF1-220ENST00000581707 PIP4K2AP48426 406 aaPredicted RBP25.64■■□□□ 1.7
SREBF1-220ENST00000581707 NEUROD2Q15784 382 aa25.64■■□□□ 1.7
SREBF1-220ENST00000581707 EIF4A1P60842 406 aaKnown RBP25.63■■□□□ 1.69
SREBF1-220ENST00000581707 GIGYF1O75420 1035 aaPredicted RBP25.62■■□□□ 1.69
SREBF1-220ENST00000581707 DPEP1P16444 411 aa25.62■■□□□ 1.69
SREBF1-220ENST00000581707 AFDNP55196 1824 aaKnown RBP25.61■■□□□ 1.69
SREBF1-220ENST00000581707 BICDL1Q6ZP65 573 aa25.61■■□□□ 1.69
SREBF1-220ENST00000581707 DZIP3Q86Y13 1208 aaKnown RBP25.61■■□□□ 1.69
SREBF1-220ENST00000581707 TSPYL4Q9UJ04 414 aa25.61■■□□□ 1.69
SREBF1-220ENST00000581707 NBPF26B4DH59 902 aa25.6■■□□□ 1.69
SREBF1-220ENST00000581707 CAMTA2O94983 1202 aa25.6■■□□□ 1.69
SREBF1-220ENST00000581707 SERPINB2P05120 415 aa25.6■■□□□ 1.69
SREBF1-220ENST00000581707 NBPF10Q6P3W6 841 aaKnown RBP25.6■■□□□ 1.69
SREBF1-220ENST00000581707 NBPF15Q8N660 670 aa25.6■■□□□ 1.69
SREBF1-220ENST00000581707 SCN7AQ01118 1682 aa25.6■■□□□ 1.69
SREBF1-220ENST00000581707 TBC1D9BQ66K14 1250 aa25.59■■□□□ 1.69
SREBF1-220ENST00000581707 BABAM1Q9NWV8 329 aa25.59■■□□□ 1.69
SREBF1-220ENST00000581707 LAMB4A4D0S4 1761 aa25.59■■□□□ 1.69
SREBF1-220ENST00000581707 TRIM35Q9UPQ4 493 aa25.58■■□□□ 1.69
SREBF1-220ENST00000581707 NRXN2Q9P2S2 1712 aa25.57■■□□□ 1.68
SREBF1-220ENST00000581707 KCNA3P22001 575 aa25.57■■□□□ 1.68
SREBF1-220ENST00000581707 ZNF784Q8NCA9 323 aaPredicted RBP25.57■■□□□ 1.68
SREBF1-220ENST00000581707 BCS1LQ9Y276 419 aa25.57■■□□□ 1.68
SREBF1-220ENST00000581707 SETDB2Q96T68 719 aa25.55■■□□□ 1.68
SREBF1-220ENST00000581707 PIM2Q9P1W9 311 aa25.55■■□□□ 1.68
SREBF1-220ENST00000581707 BRCA1P38398 1863 aaKnown RBP25.55■■□□□ 1.68
SREBF1-220ENST00000581707 BCORQ6W2J9 1755 aa25.54■■□□□ 1.68
SREBF1-220ENST00000581707 CHRNA5P30532 468 aa25.54■■□□□ 1.68
SREBF1-220ENST00000581707 CCDC184Q52MB2 194 aa25.54■■□□□ 1.68
SREBF1-220ENST00000581707 ANP32CO43423 234 aa25.53■■□□□ 1.68
SREBF1-220ENST00000581707 CLEC4GQ6UXB4 293 aa25.53■■□□□ 1.68
SREBF1-220ENST00000581707 ZNF652Q9Y2D9 606 aa25.53■■□□□ 1.68
SREBF1-220ENST00000581707 CARMIL3Q8ND23 1372 aa25.53■■□□□ 1.68
SREBF1-220ENST00000581707 APAF1O14727 1248 aa25.52■■□□□ 1.68
SREBF1-220ENST00000581707 LAS1LQ9Y4W2 734 aaKnown RBP25.52■■□□□ 1.68
SREBF1-220ENST00000581707 CHL1O00533 1208 aa25.51■■□□□ 1.67
SREBF1-220ENST00000581707 DALRD3Q5D0E6 543 aaKnown RBP25.5■■□□□ 1.67
SREBF1-220ENST00000581707 NGEFQ8N5V2 710 aa25.5■■□□□ 1.67
SREBF1-220ENST00000581707 RGL2O15211 777 aa25.49■■□□□ 1.67
SREBF1-220ENST00000581707 ERBB4Q15303 1308 aa25.48■■□□□ 1.67
SREBF1-220ENST00000581707 MYL6BP14649 208 aa25.48■■□□□ 1.67
SREBF1-220ENST00000581707 PRR5LQ6MZQ0 368 aa25.48■■□□□ 1.67
SREBF1-220ENST00000581707 ARFGEF1Q9Y6D6 1849 aa25.47■■□□□ 1.67
SREBF1-220ENST00000581707 NPHP1O15259 732 aa25.47■■□□□ 1.67
SREBF1-220ENST00000581707 EIF2S2P20042 333 aaKnown RBP25.47■■□□□ 1.67
SREBF1-220ENST00000581707 ARHGAP27Q6ZUM4 889 aa25.47■■□□□ 1.67
SREBF1-220ENST00000581707 C2CD5Q86YS7 1000 aa25.47■■□□□ 1.67
SREBF1-220ENST00000581707 CNBD1Q8NA66 436 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms