RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 STK25O00506 426 aa13.08□□□□□ -0.32
TOP3A-211ENST00000581536 SIK1P57059 783 aa13.08□□□□□ -0.32
TOP3A-211ENST00000581536 CABP4P57796 275 aa13.08□□□□□ -0.32
TOP3A-211ENST00000581536 ITPK1Q13572 414 aa13.08□□□□□ -0.32
TOP3A-211ENST00000581536 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
TOP3A-211ENST00000581536 LINC00116Q8NCU8 138 aa13.08□□□□□ -0.32
TOP3A-211ENST00000581536 COL3A1P02461 1466 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-211ENST00000581536 HSP90AB1P08238 724 aaKnown RBP13.07□□□□□ -0.32
TOP3A-211ENST00000581536 ATP6V1AP38606 617 aa13.07□□□□□ -0.32
TOP3A-211ENST00000581536 DDX10Q13206 875 aaKnown RBP13.07□□□□□ -0.32
TOP3A-211ENST00000581536 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
TOP3A-211ENST00000581536 UBR3Q6ZT12 1888 aa13.06□□□□□ -0.32
TOP3A-211ENST00000581536 C4BP0C0L5 1744 aa13.06□□□□□ -0.32
TOP3A-211ENST00000581536 AKAP4Q5JQC9 854 aa13.06□□□□□ -0.32
TOP3A-211ENST00000581536 MYH14Q7Z406 1995 aaKnown RBP13.05□□□□□ -0.32
TOP3A-211ENST00000581536 GOLGA2Q08379 1002 aa13.05□□□□□ -0.32
TOP3A-211ENST00000581536 HS6ST3Q8IZP7 471 aa13.05□□□□□ -0.32
TOP3A-211ENST00000581536 PHACTR3Q96KR7 559 aa13.05□□□□□ -0.32
TOP3A-211ENST00000581536 FHDC1Q9C0D6 1143 aaPredicted RBP13.05□□□□□ -0.32
TOP3A-211ENST00000581536 COL24A1Q17RW2 1714 aa13.05□□□□□ -0.32
TOP3A-211ENST00000581536 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
TOP3A-211ENST00000581536 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
TOP3A-211ENST00000581536 MSL1Q68DK7 614 aa13.04□□□□□ -0.32
TOP3A-211ENST00000581536 SLC16A10Q8TF71 515 aa13.04□□□□□ -0.32
TOP3A-211ENST00000581536 ARXQ96QS3 562 aa13.04□□□□□ -0.32
TOP3A-211ENST00000581536 STK24Q9Y6E0 443 aa13.04□□□□□ -0.32
TOP3A-211ENST00000581536 PLEKHG2Q9H7P9 1386 aa13.04□□□□□ -0.32
TOP3A-211ENST00000581536 PHF14O94880 888 aa13.03□□□□□ -0.32
TOP3A-211ENST00000581536 SLC39A6Q13433 755 aa13.03□□□□□ -0.32
TOP3A-211ENST00000581536 PELP1Q8IZL8 1130 aaKnown RBP13.03□□□□□ -0.32
TOP3A-211ENST00000581536 AK7Q96M32 723 aa13.03□□□□□ -0.32
TOP3A-211ENST00000581536 SYT17Q9BSW7 474 aa13.03□□□□□ -0.32
TOP3A-211ENST00000581536 IL17REQ8NFR9 667 aa13.02□□□□□ -0.33
TOP3A-211ENST00000581536 CFAP53Q96M91 514 aa13.02□□□□□ -0.33
TOP3A-211ENST00000581536 RSPH6AQ9H0K4 717 aa13.02□□□□□ -0.33
TOP3A-211ENST00000581536 SLC52A2Q9HAB3 445 aa13.02□□□□□ -0.33
TOP3A-211ENST00000581536 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.01□□□□□ -0.33
TOP3A-211ENST00000581536 U2AF1L5P0DN76 240 aaPredicted RBP13.01□□□□□ -0.33
TOP3A-211ENST00000581536 PRKAR2BP31323 418 aa13.01□□□□□ -0.33
TOP3A-211ENST00000581536 U2AF1Q01081 240 aaKnown RBP eCLIP13.01□□□□□ -0.33
TOP3A-211ENST00000581536 IER5LQ5T953 404 aa13.01□□□□□ -0.33
TOP3A-211ENST00000581536 SLC39A7Q92504 469 aa13.01□□□□□ -0.33
TOP3A-211ENST00000581536 UTRNP46939 3433 aa13□□□□□ -0.33
TOP3A-211ENST00000581536 COL5A3P25940 1745 aaPredicted RBP13□□□□□ -0.33
TOP3A-211ENST00000581536 GNPATO15228 680 aa13□□□□□ -0.33
TOP3A-211ENST00000581536 C7P10643 843 aa13□□□□□ -0.33
TOP3A-211ENST00000581536 MKRN3Q13064 507 aaKnown RBP13□□□□□ -0.33
TOP3A-211ENST00000581536 GOLGB1Q14789 3259 aaKnown RBP12.99□□□□□ -0.33
TOP3A-211ENST00000581536 POLD1P28340 1107 aa12.99□□□□□ -0.33
TOP3A-211ENST00000581536 NUDCQ9Y266 331 aa12.99□□□□□ -0.33
TOP3A-211ENST00000581536 ZNF831Q5JPB2 1677 aa12.99□□□□□ -0.33
TOP3A-211ENST00000581536 GNAT3A8MTJ3 354 aa12.98□□□□□ -0.33
TOP3A-211ENST00000581536 FLAD1Q8NFF5 587 aa12.98□□□□□ -0.33
TOP3A-211ENST00000581536 ADAMTS7Q9UKP4 1686 aa12.98□□□□□ -0.33
TOP3A-211ENST00000581536 DLG5Q8TDM6 1919 aa12.98□□□□□ -0.33
TOP3A-211ENST00000581536 TJP1Q07157 1748 aa12.97□□□□□ -0.33
TOP3A-211ENST00000581536 SSFA2P28290 1259 aa12.97□□□□□ -0.33
TOP3A-211ENST00000581536 TRAPPC3LQ5T215 181 aa12.97□□□□□ -0.33
TOP3A-211ENST00000581536 DNAJC10Q8IXB1 793 aa12.97□□□□□ -0.33
TOP3A-211ENST00000581536 NLGN2Q8NFZ4 835 aa12.97□□□□□ -0.33
TOP3A-211ENST00000581536 GAS2L2Q8NHY3 880 aa12.97□□□□□ -0.33
TOP3A-211ENST00000581536 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
TOP3A-211ENST00000581536 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
TOP3A-211ENST00000581536 KCNQ3O43525 872 aa12.96□□□□□ -0.33
TOP3A-211ENST00000581536 RPS6KA4O75676 772 aa12.96□□□□□ -0.33
TOP3A-211ENST00000581536 FCHSD2O94868 740 aa12.96□□□□□ -0.33
TOP3A-211ENST00000581536 HMGB2P26583 209 aaKnown RBP12.96□□□□□ -0.33
TOP3A-211ENST00000581536 DCTN1Q14203 1278 aa12.96□□□□□ -0.33
TOP3A-211ENST00000581536 RC3H1Q5TC82 1133 aaKnown RBP12.96□□□□□ -0.33
TOP3A-211ENST00000581536 INTS5Q6P9B9 1019 aaKnown RBP12.96□□□□□ -0.33
TOP3A-211ENST00000581536 RTCBQ9Y3I0 505 aaKnown RBP12.96□□□□□ -0.33
TOP3A-211ENST00000581536 CRKLP46109 303 aaKnown RBP12.95□□□□□ -0.34
TOP3A-211ENST00000581536 MCM10Q7L590 875 aa12.95□□□□□ -0.34
TOP3A-211ENST00000581536 EFCAB3Q8N7B9 438 aa12.95□□□□□ -0.34
TOP3A-211ENST00000581536 MAP3K5Q99683 1374 aa12.94□□□□□ -0.34
TOP3A-211ENST00000581536 CNTNAP4Q9C0A0 1308 aa12.93□□□□□ -0.34
TOP3A-211ENST00000581536 MRC1P22897 1456 aa12.93□□□□□ -0.34
TOP3A-211ENST00000581536 CYP19A1P11511 503 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-211ENST00000581536 TEFQ10587 303 aa12.93□□□□□ -0.34
TOP3A-211ENST00000581536 RALBP1Q15311 655 aa12.93□□□□□ -0.34
TOP3A-211ENST00000581536 PLEKHF1Q96S99 279 aa12.93□□□□□ -0.34
TOP3A-211ENST00000581536 SRP68Q9UHB9 627 aaKnown RBP12.93□□□□□ -0.34
TOP3A-211ENST00000581536 METRNQ9UJH8 293 aa12.93□□□□□ -0.34
TOP3A-211ENST00000581536 UBR2Q8IWV8 1755 aa12.93□□□□□ -0.34
TOP3A-211ENST00000581536 KCPQ6ZWJ8 1503 aa12.93□□□□□ -0.34
TOP3A-211ENST00000581536 C4AP0C0L4 1744 aa12.92□□□□□ -0.34
TOP3A-211ENST00000581536 RFC4P35249 363 aa12.92□□□□□ -0.34
TOP3A-211ENST00000581536 ZNF496Q96IT1 587 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-211ENST00000581536 CHD4Q14839 1912 aa12.92□□□□□ -0.34
TOP3A-211ENST00000581536 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
TOP3A-211ENST00000581536 GYS1P13807 737 aa12.91□□□□□ -0.34
TOP3A-211ENST00000581536 ZNF790Q6PG37 636 aa12.91□□□□□ -0.34
TOP3A-211ENST00000581536 MIS18AQ9NYP9 233 aa12.91□□□□□ -0.34
TOP3A-211ENST00000581536 CEMIPQ8WUJ3 1361 aa12.91□□□□□ -0.34
TOP3A-211ENST00000581536 SEC24BO95487 1268 aa12.9□□□□□ -0.34
TOP3A-211ENST00000581536 MMP10P09238 476 aa12.9□□□□□ -0.34
TOP3A-211ENST00000581536 GPR162Q16538 588 aa12.9□□□□□ -0.34
TOP3A-211ENST00000581536 CCDC87Q9NVE4 849 aa12.9□□□□□ -0.34
TOP3A-211ENST00000581536 WWC3Q9ULE0 1092 aa12.9□□□□□ -0.34
TOP3A-211ENST00000581536 CICQ96RK0 1608 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms