RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 CANXP27824 592 aaKnown RBP35.51■■■■□ 3.28
LINC00271-207ENST00000580741 GPR162Q16538 588 aa35.51■■■■□ 3.28
LINC00271-207ENST00000580741 STARD3NLO95772 234 aa35.5■■■■□ 3.27
LINC00271-207ENST00000580741 FKBP8Q14318 412 aa35.49■■■■□ 3.27
LINC00271-207ENST00000580741 THUMPD2Q9BTF0 503 aaKnown RBP35.49■■■■□ 3.27
LINC00271-207ENST00000580741 COL15A1P39059 1388 aa35.49■■■■□ 3.27
LINC00271-207ENST00000580741 GOLGB1Q14789 3259 aaKnown RBP35.49■■■■□ 3.27
LINC00271-207ENST00000580741 ZNF316A6NFI3 1004 aaPredicted RBP35.48■■■■□ 3.27
LINC00271-207ENST00000580741 MIS18AQ9NYP9 233 aa35.48■■■■□ 3.27
LINC00271-207ENST00000580741 WDR43Q15061 677 aaKnown RBP eCLIP35.46■■■■□ 3.27
LINC00271-207ENST00000580741 TAF7Q15545 349 aaPredicted RBP35.46■■■■□ 3.27
LINC00271-207ENST00000580741 USPL1Q5W0Q7 1092 aa35.46■■■■□ 3.27
LINC00271-207ENST00000580741 CCDC146Q8IYE0 955 aa35.46■■■■□ 3.27
LINC00271-207ENST00000580741 TEX13AQ9BXU3 409 aaPredicted RBP35.46■■■■□ 3.27
LINC00271-207ENST00000580741 PRAMEF22A3QJZ6 481 aa35.44■■■■□ 3.26
LINC00271-207ENST00000580741 ZPR1O75312 459 aa35.44■■■■□ 3.26
LINC00271-207ENST00000580741 YY1P25490 414 aa35.44■■■■□ 3.26
LINC00271-207ENST00000580741 A1BGP04217 495 aa35.43■■■■□ 3.26
LINC00271-207ENST00000580741 PARP3Q9Y6F1 533 aa35.42■■■■□ 3.26
LINC00271-207ENST00000580741 YBX3P16989 372 aaKnown RBP eCLIP35.41■■■■□ 3.26
LINC00271-207ENST00000580741 RIPK4P57078 832 aa35.41■■■■□ 3.26
LINC00271-207ENST00000580741 NARFQ9UHQ1 456 aa35.41■■■■□ 3.26
LINC00271-207ENST00000580741 WWC3Q9ULE0 1092 aa35.41■■■■□ 3.26
LINC00271-207ENST00000580741 ZNF330Q9Y3S2 320 aaPredicted RBP35.41■■■■□ 3.26
LINC00271-207ENST00000580741 USP16Q9Y5T5 823 aa35.41■■■■□ 3.26
LINC00271-207ENST00000580741 EIF5P55010 431 aaKnown RBP35.4■■■■□ 3.26
LINC00271-207ENST00000580741 DDR1Q08345 913 aa35.4■■■■□ 3.26
LINC00271-207ENST00000580741 RRP7AQ9Y3A4 280 aaKnown RBP35.4■■■■□ 3.26
LINC00271-207ENST00000580741 TMPOP42166 694 aaKnown RBP35.39■■■■□ 3.26
LINC00271-207ENST00000580741 ADAMTS8Q9UP79 889 aa35.39■■■■□ 3.26
LINC00271-207ENST00000580741 SNRPA1P09661 255 aaKnown RBP35.38■■■■□ 3.25
LINC00271-207ENST00000580741 PIP4K2AP48426 406 aaPredicted RBP35.37■■■■□ 3.25
LINC00271-207ENST00000580741 BCL2L12Q9HB09 334 aa35.37■■■■□ 3.25
LINC00271-207ENST00000580741 C10orf71Q711Q0 1435 aa35.36■■■■□ 3.25
LINC00271-207ENST00000580741 NEUROD2Q15784 382 aa35.35■■■■□ 3.25
LINC00271-207ENST00000580741 PNISRQ8TF01 805 aaKnown RBP35.35■■■■□ 3.25
LINC00271-207ENST00000580741 TM4SF1P30408 202 aa35.34■■■■□ 3.25
LINC00271-207ENST00000580741 IL6STP40189 918 aaPredicted RBP35.34■■■■□ 3.25
LINC00271-207ENST00000580741 RUNDC1Q96C34 613 aa35.34■■■■□ 3.25
LINC00271-207ENST00000580741 A0A087WZG4 1122 aa35.33■■■■□ 3.25
LINC00271-207ENST00000580741 KDM3BQ7LBC6 1761 aa35.33■■■■□ 3.25
LINC00271-207ENST00000580741 POLRMTO00411 1230 aaKnown RBP35.32■■■■□ 3.24
LINC00271-207ENST00000580741 TBC1D2BQ9UPU7 963 aa35.32■■■■□ 3.24
LINC00271-207ENST00000580741 PXDNLA1KZ92 1463 aa35.32■■■■□ 3.24
LINC00271-207ENST00000580741 NFIXQ14938 502 aa35.31■■■■□ 3.24
LINC00271-207ENST00000580741 KIF13BQ9NQT8 1826 aa35.3■■■■□ 3.24
LINC00271-207ENST00000580741 A0A0G2JLW4 131 aa35.28■■■■□ 3.24
LINC00271-207ENST00000580741 EIF4A1P60842 406 aaKnown RBP35.28■■■■□ 3.24
LINC00271-207ENST00000580741 LMOD3Q0VAK6 560 aa35.28■■■■□ 3.24
LINC00271-207ENST00000580741 CCDC184Q52MB2 194 aa35.28■■■■□ 3.24
LINC00271-207ENST00000580741 NPM2Q86SE8 214 aaKnown RBP35.27■■■■□ 3.24
LINC00271-207ENST00000580741 TSPYL4Q9UJ04 414 aa35.27■■■■□ 3.24
LINC00271-207ENST00000580741 KIAA1551Q9HCM1 1747 aa35.26■■■■□ 3.24
LINC00271-207ENST00000580741 GRIN3BO60391 1043 aa35.26■■■■□ 3.24
LINC00271-207ENST00000580741 BICDL1Q6ZP65 573 aa35.26■■■■□ 3.24
LINC00271-207ENST00000580741 NBPF26B4DH59 902 aa35.25■■■■□ 3.23
LINC00271-207ENST00000580741 DPEP1P16444 411 aa35.25■■■■□ 3.23
LINC00271-207ENST00000580741 TGFB2P61812 414 aa35.25■■■■□ 3.23
LINC00271-207ENST00000580741 NBPF10Q6P3W6 841 aaKnown RBP35.25■■■■□ 3.23
LINC00271-207ENST00000580741 NBPF15Q8N660 670 aa35.25■■■■□ 3.23
LINC00271-207ENST00000580741 N4BP2Q86UW6 1770 aaPredicted RBP35.25■■■■□ 3.23
LINC00271-207ENST00000580741 GIGYF1O75420 1035 aaPredicted RBP35.24■■■■□ 3.23
LINC00271-207ENST00000580741 SCN7AQ01118 1682 aa35.24■■■■□ 3.23
LINC00271-207ENST00000580741 DZIP3Q86Y13 1208 aaKnown RBP35.23■■■■□ 3.23
LINC00271-207ENST00000580741 TRIM35Q9UPQ4 493 aa35.23■■■■□ 3.23
LINC00271-207ENST00000580741 CHD4Q14839 1912 aa35.23■■■■□ 3.23
LINC00271-207ENST00000580741 CAMTA2O94983 1202 aa35.22■■■■□ 3.23
LINC00271-207ENST00000580741 TBC1D9BQ66K14 1250 aa35.22■■■■□ 3.23
LINC00271-207ENST00000580741 SERPINB2P05120 415 aa35.21■■■■□ 3.23
LINC00271-207ENST00000580741 LAMB4A4D0S4 1761 aa35.2■■■■□ 3.23
LINC00271-207ENST00000580741 AFDNP55196 1824 aaKnown RBP35.18■■■■□ 3.22
LINC00271-207ENST00000580741 ANP32CO43423 234 aa35.17■■■■□ 3.22
LINC00271-207ENST00000580741 BCS1LQ9Y276 419 aa35.17■■■■□ 3.22
LINC00271-207ENST00000580741 APAF1O14727 1248 aa35.16■■■■□ 3.22
LINC00271-207ENST00000580741 CHRNA5P30532 468 aa35.16■■■■□ 3.22
LINC00271-207ENST00000580741 LAS1LQ9Y4W2 734 aaKnown RBP35.16■■■■□ 3.22
LINC00271-207ENST00000580741 KCNA3P22001 575 aa35.15■■■■□ 3.22
LINC00271-207ENST00000580741 NRXN2Q9P2S2 1712 aa35.15■■■■□ 3.22
LINC00271-207ENST00000580741 NGEFQ8N5V2 710 aa35.14■■■■□ 3.22
LINC00271-207ENST00000580741 BABAM1Q9NWV8 329 aa35.14■■■■□ 3.22
LINC00271-207ENST00000580741 BCORQ6W2J9 1755 aa35.14■■■■□ 3.22
LINC00271-207ENST00000580741 CARMIL3Q8ND23 1372 aa35.13■■■■□ 3.21
LINC00271-207ENST00000580741 ZNF784Q8NCA9 323 aaPredicted RBP35.11■■■■□ 3.21
LINC00271-207ENST00000580741 CHL1O00533 1208 aa35.1■■■■□ 3.21
LINC00271-207ENST00000580741 MYL6BP14649 208 aa35.1■■■■□ 3.21
LINC00271-207ENST00000580741 CCDC24Q8N4L8 307 aa35.1■■■■□ 3.21
LINC00271-207ENST00000580741 SETDB2Q96T68 719 aa35.1■■■■□ 3.21
LINC00271-207ENST00000580741 MRS2Q9HD23 443 aa35.09■■■■□ 3.21
LINC00271-207ENST00000580741 PIM2Q9P1W9 311 aa35.09■■■■□ 3.21
LINC00271-207ENST00000580741 BRCA1P38398 1863 aaKnown RBP35.08■■■■□ 3.21
LINC00271-207ENST00000580741 EIF2S2P20042 333 aaKnown RBP35.08■■■■□ 3.21
LINC00271-207ENST00000580741 KRT24Q2M2I5 525 aa35.08■■■■□ 3.21
LINC00271-207ENST00000580741 SENP3-EIF4A1A0A087X0R7 540 aa35.07■■■■□ 3.2
LINC00271-207ENST00000580741 PRR5LQ6MZQ0 368 aa35.06■■■■□ 3.2
LINC00271-207ENST00000580741 ZNF652Q9Y2D9 606 aa35.06■■■■□ 3.2
LINC00271-207ENST00000580741 HLFQ16534 295 aa35.05■■■■□ 3.2
LINC00271-207ENST00000580741 CLEC4GQ6UXB4 293 aa35.05■■■■□ 3.2
LINC00271-207ENST00000580741 TTLL7Q6ZT98 887 aa35.04■■■■□ 3.2
LINC00271-207ENST00000580741 DALRD3Q5D0E6 543 aaKnown RBP35.03■■■■□ 3.2
LINC00271-207ENST00000580741 NECTIN2Q92692 538 aa35.03■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms