RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 BLMP54132 1417 aaPredicted RBP9.59□□□□□ -0.87
RNF43-204ENST00000580014 FAM83GA6ND36 823 aa9.59□□□□□ -0.87
RNF43-204ENST00000580014 DNAJB2P25686 324 aa9.59□□□□□ -0.87
RNF43-204ENST00000580014 HOXC9P31274 260 aa9.59□□□□□ -0.87
RNF43-204ENST00000580014 CCDC184Q52MB2 194 aa9.59□□□□□ -0.87
RNF43-204ENST00000580014 PACS2Q86VP3 889 aa9.59□□□□□ -0.87
RNF43-204ENST00000580014 ARXQ96QS3 562 aa9.59□□□□□ -0.87
RNF43-204ENST00000580014 ABCA3Q99758 1704 aa9.59□□□□□ -0.87
RNF43-204ENST00000580014 C3orf80F5H4A9 247 aa9.58□□□□□ -0.88
RNF43-204ENST00000580014 IL13P35225 146 aa9.58□□□□□ -0.88
RNF43-204ENST00000580014 ZC3H6P61129 1189 aaKnown RBP9.58□□□□□ -0.88
RNF43-204ENST00000580014 DIXDC1Q155Q3 683 aa9.58□□□□□ -0.88
RNF43-204ENST00000580014 MYSM1Q5VVJ2 828 aa9.58□□□□□ -0.88
RNF43-204ENST00000580014 PNISRQ8TF01 805 aaKnown RBP9.58□□□□□ -0.88
RNF43-204ENST00000580014 TATDN2Q93075 761 aa9.58□□□□□ -0.88
RNF43-204ENST00000580014 OTUD5Q96G74 571 aa9.58□□□□□ -0.88
RNF43-204ENST00000580014 PNMA3Q9UL41 463 aa9.58□□□□□ -0.88
RNF43-204ENST00000580014 AXIN2Q9Y2T1 843 aa9.58□□□□□ -0.88
RNF43-204ENST00000580014 PEAK1Q9H792 1746 aa9.58□□□□□ -0.88
RNF43-204ENST00000580014 COL18A1P39060 1754 aa9.58□□□□□ -0.88
RNF43-204ENST00000580014 AMPHP49418 695 aa9.57□□□□□ -0.88
RNF43-204ENST00000580014 CNGB1Q14028 1251 aaPredicted RBP9.57□□□□□ -0.88
RNF43-204ENST00000580014 HSP90AB2PQ58FF8 381 aa9.57□□□□□ -0.88
RNF43-204ENST00000580014 FNBP4Q8N3X1 1017 aaPredicted RBP9.57□□□□□ -0.88
RNF43-204ENST00000580014 CFAP53Q96M91 514 aa9.57□□□□□ -0.88
RNF43-204ENST00000580014 KCNK17Q96T54 332 aa9.57□□□□□ -0.88
RNF43-204ENST00000580014 TBC1D2Q9BYX2 928 aa9.57□□□□□ -0.88
RNF43-204ENST00000580014 PRDM11Q9NQV5 511 aa9.57□□□□□ -0.88
RNF43-204ENST00000580014 LMO7Q8WWI1 1683 aa9.57□□□□□ -0.88
RNF43-204ENST00000580014 NCAPD2Q15021 1401 aa9.56□□□□□ -0.88
RNF43-204ENST00000580014 LRP6O75581 1613 aa9.56□□□□□ -0.88
RNF43-204ENST00000580014 CD46P15529 392 aa9.56□□□□□ -0.88
RNF43-204ENST00000580014 EIF4A2Q14240 407 aaKnown RBP9.56□□□□□ -0.88
RNF43-204ENST00000580014 SULF1Q8IWU6 871 aa9.56□□□□□ -0.88
RNF43-204ENST00000580014 PROCA1Q8NCQ7 364 aaPredicted RBP9.56□□□□□ -0.88
RNF43-204ENST00000580014 TMEM134Q9H6X4 195 aa9.56□□□□□ -0.88
RNF43-204ENST00000580014 POLR3EQ9NVU0 708 aa9.56□□□□□ -0.88
RNF43-204ENST00000580014 SLIT2O94813 1529 aa9.56□□□□□ -0.88
RNF43-204ENST00000580014 ERBB3P21860 1342 aa9.56□□□□□ -0.88
RNF43-204ENST00000580014 CAMTA1Q9Y6Y1 1673 aa9.55□□□□□ -0.88
RNF43-204ENST00000580014 DIAPH1O60610 1272 aaKnown RBP9.55□□□□□ -0.88
RNF43-204ENST00000580014 CLK2P49760 499 aaKnown RBP9.55□□□□□ -0.88
RNF43-204ENST00000580014 CHRNA2Q15822 529 aa9.55□□□□□ -0.88
RNF43-204ENST00000580014 PROX2Q3B8N5 592 aa9.55□□□□□ -0.88
RNF43-204ENST00000580014 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.55□□□□□ -0.88
RNF43-204ENST00000580014 MRS2Q9HD23 443 aa9.55□□□□□ -0.88
RNF43-204ENST00000580014 PPM1GO15355 546 aaPredicted RBP9.54□□□□□ -0.88
RNF43-204ENST00000580014 COL14A1Q05707 1796 aaKnown RBP9.54□□□□□ -0.88
RNF43-204ENST00000580014 MAP2P11137 1827 aaKnown RBP9.54□□□□□ -0.88
RNF43-204ENST00000580014 IGSF1Q8N6C5 1336 aa9.54□□□□□ -0.88
RNF43-204ENST00000580014 COL5A2P05997 1499 aaPredicted RBP9.53□□□□□ -0.88
RNF43-204ENST00000580014 KDRP35968 1356 aa9.53□□□□□ -0.88
RNF43-204ENST00000580014 NUTM2BA6NNL0 878 aaPredicted RBP9.53□□□□□ -0.88
RNF43-204ENST00000580014 NUTM2EB1AL46 878 aaPredicted RBP9.53□□□□□ -0.88
RNF43-204ENST00000580014 ADAMTS2O95450 1211 aa9.53□□□□□ -0.88
RNF43-204ENST00000580014 NUTM2AQ8IVF1 878 aaPredicted RBP9.53□□□□□ -0.88
RNF43-204ENST00000580014 ANKRD24Q8TF21 1146 aa9.53□□□□□ -0.88
RNF43-204ENST00000580014 ZBED2Q9BTP6 218 aa9.53□□□□□ -0.88
RNF43-204ENST00000580014 NUDCQ9Y266 331 aa9.53□□□□□ -0.88
RNF43-204ENST00000580014 WDR17Q8IZU2 1322 aa9.53□□□□□ -0.88
RNF43-204ENST00000580014 BCL9LQ86UU0 1499 aa9.53□□□□□ -0.88
RNF43-204ENST00000580014 PLEKHG2Q9H7P9 1386 aa9.52□□□□□ -0.88
RNF43-204ENST00000580014 DDX11L8A8MPP1 907 aa9.52□□□□□ -0.89
RNF43-204ENST00000580014 NBPF6Q5VWK0 638 aa9.52□□□□□ -0.89
RNF43-204ENST00000580014 SPIRE2Q8WWL2 714 aa9.52□□□□□ -0.89
RNF43-204ENST00000580014 NBPF4Q96M43 638 aa9.52□□□□□ -0.89
RNF43-204ENST00000580014 BTG4Q9NY30 223 aa9.52□□□□□ -0.89
RNF43-204ENST00000580014 LTN1O94822 1766 aa9.52□□□□□ -0.89
RNF43-204ENST00000580014 RGPD1P0DJD0 1748 aa9.51□□□□□ -0.89
RNF43-204ENST00000580014 SMAPO00193 183 aa9.51□□□□□ -0.89
RNF43-204ENST00000580014 MCM6Q14566 821 aa9.51□□□□□ -0.89
RNF43-204ENST00000580014 UNC5CLQ8IV45 518 aa9.51□□□□□ -0.89
RNF43-204ENST00000580014 CARD10Q9BWT7 1032 aa9.51□□□□□ -0.89
RNF43-204ENST00000580014 ADAMTS8Q9UP79 889 aa9.51□□□□□ -0.89
RNF43-204ENST00000580014 VPS72Q15906 364 aa9.5□□□□□ -0.89
RNF43-204ENST00000580014 TUSC1Q2TAM9 212 aa9.5□□□□□ -0.89
RNF43-204ENST00000580014 NGLY1Q96IV0 654 aa9.5□□□□□ -0.89
RNF43-204ENST00000580014 PLEKHF1Q96S99 279 aa9.5□□□□□ -0.89
RNF43-204ENST00000580014 KIAA1468Q9P260 1216 aa9.5□□□□□ -0.89
RNF43-204ENST00000580014 CRB1P82279 1406 aa9.49□□□□□ -0.89
RNF43-204ENST00000580014 NWD2Q9ULI1 1742 aa9.49□□□□□ -0.89
RNF43-204ENST00000580014 ZBTB7CA1YPR0 619 aa9.49□□□□□ -0.89
RNF43-204ENST00000580014 ARHGAP33O14559 1287 aa9.49□□□□□ -0.89
RNF43-204ENST00000580014 U2AF1L5P0DN76 240 aaPredicted RBP9.49□□□□□ -0.89
RNF43-204ENST00000580014 PSEN2P49810 448 aa9.49□□□□□ -0.89
RNF43-204ENST00000580014 U2AF1Q01081 240 aaKnown RBP eCLIP9.49□□□□□ -0.89
RNF43-204ENST00000580014 LARP1Q6PKG0 1096 aaKnown RBP9.49□□□□□ -0.89
RNF43-204ENST00000580014 RIC3Q7Z5B4 369 aa9.49□□□□□ -0.89
RNF43-204ENST00000580014 NUTM1Q86Y26 1132 aa9.49□□□□□ -0.89
RNF43-204ENST00000580014 SLC4A5Q9BY07 1137 aa9.49□□□□□ -0.89
RNF43-204ENST00000580014 LIMD1Q9UGP4 676 aa9.49□□□□□ -0.89
RNF43-204ENST00000580014 SPATA31A5Q5VU36 1347 aa9.49□□□□□ -0.89
RNF43-204ENST00000580014 SPATA31A7Q8IWB4 1347 aa9.49□□□□□ -0.89
RNF43-204ENST00000580014 SPTLC1O15269 473 aa9.48□□□□□ -0.89
RNF43-204ENST00000580014 EVA1CP58658 441 aa9.48□□□□□ -0.89
RNF43-204ENST00000580014 WDR43Q15061 677 aaKnown RBP eCLIP9.48□□□□□ -0.89
RNF43-204ENST00000580014 VARS2Q5ST30 1063 aaKnown RBP9.48□□□□□ -0.89
RNF43-204ENST00000580014 AEBP1Q8IUX7 1158 aa9.48□□□□□ -0.89
RNF43-204ENST00000580014 LTV1Q96GA3 475 aaPredicted RBP9.48□□□□□ -0.89
RNF43-204ENST00000580014 C8orf37Q96NL8 207 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms