RNA–Protein interactions for RNA: ENST00000579986.6

RTTN-204, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-204ENST00000579986 RGPD4Q7Z3J3 1758 aa8.14□□□□□ -1.11
RTTN-204ENST00000579986 ADCY9O60503 1353 aa8.14□□□□□ -1.11
RTTN-204ENST00000579986 G2E3Q7L622 706 aa8.14□□□□□ -1.11
RTTN-204ENST00000579986 FRAT1Q92837 279 aaPredicted RBP8.14□□□□□ -1.11
RTTN-204ENST00000579986 DDX21Q9NR30 783 aaKnown RBP eCLIP8.14□□□□□ -1.11
RTTN-204ENST00000579986 FLIIQ13045 1269 aa8.14□□□□□ -1.11
RTTN-204ENST00000579986 HDGFL1Q5TGJ6 251 aa8.14□□□□□ -1.11
RTTN-204ENST00000579986 TRPC5Q9UL62 973 aaPredicted RBP8.14□□□□□ -1.11
RTTN-204ENST00000579986 COG6Q9Y2V7 657 aa8.14□□□□□ -1.11
RTTN-204ENST00000579986 DDX54Q8TDD1 881 aaKnown RBP8.13□□□□□ -1.11
RTTN-204ENST00000579986 HYPKQ9NX55 129 aa8.13□□□□□ -1.11
RTTN-204ENST00000579986 TAF1LQ8IZX4 1826 aa8.13□□□□□ -1.11
RTTN-204ENST00000579986 ANKRD36CQ5JPF3 1778 aa8.13□□□□□ -1.11
RTTN-204ENST00000579986 BCORQ6W2J9 1755 aa8.13□□□□□ -1.11
RTTN-204ENST00000579986 PRAMEF22A3QJZ6 481 aa8.13□□□□□ -1.11
RTTN-204ENST00000579986 SLC39A6Q13433 755 aa8.13□□□□□ -1.11
RTTN-204ENST00000579986 HDAC1Q13547 482 aaPredicted RBP8.13□□□□□ -1.11
RTTN-204ENST00000579986 STK31Q9BXU1 1019 aa8.13□□□□□ -1.11
RTTN-204ENST00000579986 CHMP4BQ9H444 224 aaKnown RBP8.13□□□□□ -1.11
RTTN-204ENST00000579986 TMOD3Q9NYL9 352 aa8.13□□□□□ -1.11
RTTN-204ENST00000579986 COL15A1P39059 1388 aa8.12□□□□□ -1.11
RTTN-204ENST00000579986 CHPF2Q9P2E5 772 aa8.12□□□□□ -1.11
RTTN-204ENST00000579986 USP35Q9P2H5 1018 aa8.12□□□□□ -1.11
RTTN-204ENST00000579986 UTYO14607 1347 aa8.12□□□□□ -1.11
RTTN-204ENST00000579986 CCT4P50991 539 aaKnown RBP8.12□□□□□ -1.11
RTTN-204ENST00000579986 FBXO41Q8TF61 875 aa8.12□□□□□ -1.11
RTTN-204ENST00000579986 CANXP27824 592 aaKnown RBP8.11□□□□□ -1.11
RTTN-204ENST00000579986 FTSJ3Q8IY81 847 aaKnown RBP8.11□□□□□ -1.11
RTTN-204ENST00000579986 SLC4A9Q96Q91 983 aa8.11□□□□□ -1.11
RTTN-204ENST00000579986 TEX13AQ9BXU3 409 aaPredicted RBP8.11□□□□□ -1.11
RTTN-204ENST00000579986 PCDHB15Q9Y5E8 787 aa8.11□□□□□ -1.11
RTTN-204ENST00000579986 CENPQQ7L2Z9 268 aaPredicted RBP8.11□□□□□ -1.11
RTTN-204ENST00000579986 TTC5Q8N0Z6 440 aa8.11□□□□□ -1.11
RTTN-204ENST00000579986 FAM98CQ17RN3 349 aaKnown RBP8.11□□□□□ -1.11
RTTN-204ENST00000579986 PROSER3Q2NL68 480 aa8.11□□□□□ -1.11
RTTN-204ENST00000579986 BEND3Q5T5X7 828 aa8.11□□□□□ -1.11
RTTN-204ENST00000579986 B4GALNT3Q6L9W6 998 aa8.11□□□□□ -1.11
RTTN-204ENST00000579986 PHAXQ9H814 394 aaKnown RBP8.11□□□□□ -1.11
RTTN-204ENST00000579986 USP16Q9Y5T5 823 aa8.11□□□□□ -1.11
RTTN-204ENST00000579986 NBPF26B4DH59 902 aa8.1□□□□□ -1.11
RTTN-204ENST00000579986 NBPF14Q5TI25 921 aa8.1□□□□□ -1.11
RTTN-204ENST00000579986 NBPF10Q6P3W6 841 aaKnown RBP8.1□□□□□ -1.11
RTTN-204ENST00000579986 NBPF15Q8N660 670 aa8.1□□□□□ -1.11
RTTN-204ENST00000579986 ASAP1Q9ULH1 1129 aa8.1□□□□□ -1.11
RTTN-204ENST00000579986 AFDNP55196 1824 aaKnown RBP8.1□□□□□ -1.11
RTTN-204ENST00000579986 KSR2Q6VAB6 950 aa8.1□□□□□ -1.11
RTTN-204ENST00000579986 CCDC136Q96JN2 1154 aa8.1□□□□□ -1.11
RTTN-204ENST00000579986 SCN7AQ01118 1682 aa8.1□□□□□ -1.11
RTTN-204ENST00000579986 TNS1Q9HBL0 1735 aaKnown RBP8.09□□□□□ -1.11
RTTN-204ENST00000579986 TCERG1O14776 1098 aaKnown RBP8.09□□□□□ -1.11
RTTN-204ENST00000579986 IGHDP01880 384 aa8.09□□□□□ -1.11
RTTN-204ENST00000579986 CYP19A1P11511 503 aaPredicted RBP8.09□□□□□ -1.11
RTTN-204ENST00000579986 PRIM1P49642 420 aaKnown RBP8.09□□□□□ -1.11
RTTN-204ENST00000579986 ZNF772Q68DY9 489 aaPredicted RBP8.09□□□□□ -1.11
RTTN-204ENST00000579986 MYH14Q7Z406 1995 aaKnown RBP8.09□□□□□ -1.11
RTTN-204ENST00000579986 RGL2O15211 777 aa8.09□□□□□ -1.12
RTTN-204ENST00000579986 ALDH1L1O75891 902 aa8.09□□□□□ -1.12
RTTN-204ENST00000579986 ADRA2BP18089 450 aa8.09□□□□□ -1.12
RTTN-204ENST00000579986 MEX3CQ5U5Q3 659 aaKnown RBP8.09□□□□□ -1.12
RTTN-204ENST00000579986 ITPRIPQ8IWB1 547 aa8.09□□□□□ -1.12
RTTN-204ENST00000579986 SIRT2Q8IXJ6 389 aa8.09□□□□□ -1.12
RTTN-204ENST00000579986 LAMB2P55268 1798 aa8.08□□□□□ -1.12
RTTN-204ENST00000579986 SMC5Q8IY18 1101 aa8.08□□□□□ -1.12
RTTN-204ENST00000579986 DNAAF4Q8WXU2 420 aa8.08□□□□□ -1.12
RTTN-204ENST00000579986 SMARCC1Q92922 1105 aaPredicted RBP8.08□□□□□ -1.12
RTTN-204ENST00000579986 QTRT2Q9H974 415 aaKnown RBP8.08□□□□□ -1.12
RTTN-204ENST00000579986 EIF2S2P20042 333 aaKnown RBP8.07□□□□□ -1.12
RTTN-204ENST00000579986 USP44Q9H0E7 712 aa8.07□□□□□ -1.12
RTTN-204ENST00000579986 NUP98P52948 1817 aa8.07□□□□□ -1.12
RTTN-204ENST00000579986 PALLDQ8WX93 1383 aa8.07□□□□□ -1.12
RTTN-204ENST00000579986 COL24A1Q17RW2 1714 aa8.07□□□□□ -1.12
RTTN-204ENST00000579986 FKBP5Q13451 457 aaPredicted RBP8.07□□□□□ -1.12
RTTN-204ENST00000579986 PLBD2Q8NHP8 589 aa8.07□□□□□ -1.12
RTTN-204ENST00000579986 RGS17Q9UGC6 210 aaPredicted RBP8.07□□□□□ -1.12
RTTN-204ENST00000579986 C4BP0C0L5 1744 aa8.07□□□□□ -1.12
RTTN-204ENST00000579986 PI4KAP2A4QPH2 592 aa8.06□□□□□ -1.12
RTTN-204ENST00000579986 F6X3S4 739 aa8.06□□□□□ -1.12
RTTN-204ENST00000579986 RPAP2Q8IXW5 612 aaPredicted RBP8.06□□□□□ -1.12
RTTN-204ENST00000579986 SEPT12Q8IYM1 358 aa8.06□□□□□ -1.12
RTTN-204ENST00000579986 ANKRD44Q8N8A2 993 aa8.06□□□□□ -1.12
RTTN-204ENST00000579986 PI4KAP1Q8N8J0 262 aa8.06□□□□□ -1.12
RTTN-204ENST00000579986 METTL22Q9BUU2 404 aaPredicted RBP8.06□□□□□ -1.12
RTTN-204ENST00000579986 TUBGCP6Q96RT7 1819 aa8.06□□□□□ -1.12
RTTN-204ENST00000579986 RBM6P78332 1123 aaKnown RBP8.06□□□□□ -1.12
RTTN-204ENST00000579986 MTX1Q13505 466 aa8.06□□□□□ -1.12
RTTN-204ENST00000579986 INTS5Q6P9B9 1019 aaKnown RBP8.06□□□□□ -1.12
RTTN-204ENST00000579986 LINS1Q8NG48 757 aa8.06□□□□□ -1.12
RTTN-204ENST00000579986 RWDD1Q9H446 243 aaPredicted RBP8.06□□□□□ -1.12
RTTN-204ENST00000579986 C4AP0C0L4 1744 aa8.06□□□□□ -1.12
RTTN-204ENST00000579986 DDX58O95786 925 aaKnown RBP8.06□□□□□ -1.12
RTTN-204ENST00000579986 IGKV5-2P06315 115 aa8.06□□□□□ -1.12
RTTN-204ENST00000579986 TRIM28Q13263 835 aaKnown RBP8.06□□□□□ -1.12
RTTN-204ENST00000579986 CEP85Q6P2H3 762 aa8.06□□□□□ -1.12
RTTN-204ENST00000579986 NECTIN2Q92692 538 aa8.06□□□□□ -1.12
RTTN-204ENST00000579986 MAP3K2Q9Y2U5 619 aa8.06□□□□□ -1.12
RTTN-204ENST00000579986 CCDC9Q9Y3X0 531 aaKnown RBP8.06□□□□□ -1.12
RTTN-204ENST00000579986 CNTNAP4Q9C0A0 1308 aa8.06□□□□□ -1.12
RTTN-204ENST00000579986 QSER1Q2KHR3 1735 aa8.05□□□□□ -1.12
RTTN-204ENST00000579986 UBR3Q6ZT12 1888 aa8.05□□□□□ -1.12
RTTN-204ENST00000579986 KCNQ2O43526 872 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms