RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 NFKBIEO00221 500 aa10.13□□□□□ -0.79
CDK5RAP3-209ENST00000578663 AOC2O75106 756 aa10.13□□□□□ -0.79
CDK5RAP3-209ENST00000578663 DPY19L2Q6NUT2 758 aa10.13□□□□□ -0.79
CDK5RAP3-209ENST00000578663 USHBP1Q8N6Y0 703 aa10.13□□□□□ -0.79
CDK5RAP3-209ENST00000578663 ABT1Q9ULW3 272 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP3-209ENST00000578663 TMF1P82094 1093 aa10.12□□□□□ -0.79
CDK5RAP3-209ENST00000578663 ITPK1Q13572 414 aa10.12□□□□□ -0.79
CDK5RAP3-209ENST00000578663 SCN11AQ9UI33 1791 aa10.11□□□□□ -0.79
CDK5RAP3-209ENST00000578663 COL5A3P25940 1745 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-209ENST00000578663 UNC80Q8N2C7 3258 aa10.11□□□□□ -0.79
CDK5RAP3-209ENST00000578663 DDNO94850 711 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-209ENST00000578663 RRS1Q15050 365 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-209ENST00000578663 CARD11Q9BXL7 1154 aa10.11□□□□□ -0.79
CDK5RAP3-209ENST00000578663 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.11□□□□□ -0.791e-14■■□□□ 11.8
CDK5RAP3-209ENST00000578663 TMOD3Q9NYL9 352 aa10.11□□□□□ -0.79
CDK5RAP3-209ENST00000578663 RTCBQ9Y3I0 505 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-209ENST00000578663 CNTNAP4Q9C0A0 1308 aa10.1□□□□□ -0.79
CDK5RAP3-209ENST00000578663 MYH14Q7Z406 1995 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-209ENST00000578663 CA12O43570 354 aa10.1□□□□□ -0.79
CDK5RAP3-209ENST00000578663 SLC24A1O60721 1099 aa10.1□□□□□ -0.79
CDK5RAP3-209ENST00000578663 FBLN1P23142 703 aa10.1□□□□□ -0.79
CDK5RAP3-209ENST00000578663 ATP6V1AP38606 617 aa10.1□□□□□ -0.79
CDK5RAP3-209ENST00000578663 GRM1Q13255 1194 aa10.1□□□□□ -0.79
CDK5RAP3-209ENST00000578663 TRAPPC3LQ5T215 181 aa10.1□□□□□ -0.79
CDK5RAP3-209ENST00000578663 RC3H1Q5TC82 1133 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-209ENST00000578663 MPNDQ8N594 471 aa10.1□□□□□ -0.79
CDK5RAP3-209ENST00000578663 TAF1DQ9H5J8 278 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-209ENST00000578663 SPG7Q9UQ90 795 aa10.1□□□□□ -0.79
CDK5RAP3-209ENST00000578663 PARP3Q9Y6F1 533 aa10.1□□□□□ -0.79
CDK5RAP3-209ENST00000578663 ANKRD26Q9UPS8 1709 aa10.1□□□□□ -0.79
CDK5RAP3-209ENST00000578663 GYS1P13807 737 aa10.09□□□□□ -0.79
CDK5RAP3-209ENST00000578663 MAP2K2P36507 400 aa10.09□□□□□ -0.79
CDK5RAP3-209ENST00000578663 ECE1P42892 770 aa10.09□□□□□ -0.79
CDK5RAP3-209ENST00000578663 MNX1P50219 401 aaPredicted RBP10.09□□□□□ -0.79
CDK5RAP3-209ENST00000578663 PCGF6Q9BYE7 350 aa10.09□□□□□ -0.79
CDK5RAP3-209ENST00000578663 ASAP1Q9ULH1 1129 aa10.09□□□□□ -0.79
CDK5RAP3-209ENST00000578663 TONSLQ96HA7 1378 aa10.09□□□□□ -0.79
CDK5RAP3-209ENST00000578663 CACNA1SQ13698 1873 aa10.08□□□□□ -0.8
CDK5RAP3-209ENST00000578663 AKAP11Q9UKA4 1901 aa10.08□□□□□ -0.8
CDK5RAP3-209ENST00000578663 FYB1O15117 783 aa10.08□□□□□ -0.8
CDK5RAP3-209ENST00000578663 FMR1Q06787 632 aaKnown RBP eCLIP10.08□□□□□ -0.8
CDK5RAP3-209ENST00000578663 HSP90AB2PQ58FF8 381 aa10.08□□□□□ -0.8
CDK5RAP3-209ENST00000578663 PAXIP1Q6ZW49 1069 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP3-209ENST00000578663 KIF20BQ96Q89 1820 aa10.07□□□□□ -0.8
CDK5RAP3-209ENST00000578663 RPS6KA4O75676 772 aa10.07□□□□□ -0.8
CDK5RAP3-209ENST00000578663 MAP1SQ66K74 1059 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-209ENST00000578663 CNTROBQ8N137 903 aa10.07□□□□□ -0.8
CDK5RAP3-209ENST00000578663 ARHGEF1Q92888 912 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-209ENST00000578663 ATG3Q9NT62 314 aa10.07□□□□□ -0.8
CDK5RAP3-209ENST00000578663 NRXN2Q9P2S2 1712 aa10.07□□□□□ -0.8
CDK5RAP3-209ENST00000578663 RANBP2P49792 3224 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-209ENST00000578663 RFC4P35249 363 aa10.06□□□□□ -0.8
CDK5RAP3-209ENST00000578663 ERFEQ4G0M1 354 aa10.06□□□□□ -0.8
CDK5RAP3-209ENST00000578663 IFNL2Q8IZJ0 200 aa10.06□□□□□ -0.8
CDK5RAP3-209ENST00000578663 L3MBTL3Q96JM7 780 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-209ENST00000578663 TESK2Q96S53 571 aa10.06□□□□□ -0.8
CDK5RAP3-209ENST00000578663 COLQQ9Y215 455 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-209ENST00000578663 IQCA1LA6NCM1 817 aa10.05□□□□□ -0.8
CDK5RAP3-209ENST00000578663 PHKG2P15735 406 aa10.05□□□□□ -0.8
CDK5RAP3-209ENST00000578663 BRPF1P55201 1214 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-209ENST00000578663 DDR1Q08345 913 aa10.05□□□□□ -0.8
CDK5RAP3-209ENST00000578663 EAPPQ56P03 285 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-209ENST00000578663 GGNBP2Q9H3C7 697 aa10.05□□□□□ -0.8
CDK5RAP3-209ENST00000578663 DDX21Q9NR30 783 aaKnown RBP eCLIP10.05□□□□□ -0.8
CDK5RAP3-209ENST00000578663 RBBP6Q7Z6E9 1792 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-209ENST00000578663 BRCA2P51587 3418 aa10.04□□□□□ -0.8
CDK5RAP3-209ENST00000578663 PAPPA2Q9BXP8 1791 aa10.04□□□□□ -0.8
CDK5RAP3-209ENST00000578663 SLC4A9Q96Q91 983 aa10.04□□□□□ -0.8
CDK5RAP3-209ENST00000578663 SIN3AQ96ST3 1273 aa10.04□□□□□ -0.8
CDK5RAP3-209ENST00000578663 HPS5Q9UPZ3 1129 aa10.04□□□□□ -0.8
CDK5RAP3-209ENST00000578663 USP42Q9H9J4 1324 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-209ENST00000578663 LAMB4A4D0S4 1761 aa10.03□□□□□ -0.8
CDK5RAP3-209ENST00000578663 ERVV-2B6SEH9 535 aa10.03□□□□□ -0.8
CDK5RAP3-209ENST00000578663 CST9Q5W186 159 aa10.03□□□□□ -0.8
CDK5RAP3-209ENST00000578663 CIAPIN1Q6FI81 312 aa10.03□□□□□ -0.8
CDK5RAP3-209ENST00000578663 ANKRD31Q8N7Z5 1873 aa10.03□□□□□ -0.8
CDK5RAP3-209ENST00000578663 CLEC11AQ9Y240 323 aa10.03□□□□□ -0.8
CDK5RAP3-209ENST00000578663 TLL2Q9Y6L7 1015 aa10.03□□□□□ -0.8
CDK5RAP3-209ENST00000578663 SPTBN5Q9NRC6 3674 aaKnown RBP10.02□□□□□ -0.8
CDK5RAP3-209ENST00000578663 COL11A2P13942 1736 aaPredicted RBP10.02□□□□□ -0.8
CDK5RAP3-209ENST00000578663 HSP90AB1P08238 724 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-209ENST00000578663 ZIC5Q96T25 663 aa10.02□□□□□ -0.81
CDK5RAP3-209ENST00000578663 WASHC2AQ641Q2 1341 aa10.02□□□□□ -0.81
CDK5RAP3-209ENST00000578663 VCANP13611 3396 aa10.01□□□□□ -0.81
CDK5RAP3-209ENST00000578663 POLRMTO00411 1230 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-209ENST00000578663 FKBP8Q14318 412 aa10.01□□□□□ -0.81
CDK5RAP3-209ENST00000578663 COL25A1Q9BXS0 654 aaPredicted RBP10.01□□□□□ -0.81
CDK5RAP3-209ENST00000578663 EMILIN1Q9Y6C2 1016 aa10.01□□□□□ -0.81
CDK5RAP3-209ENST00000578663 KIAA0100Q14667 2235 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-209ENST00000578663 TJP1Q07157 1748 aa10□□□□□ -0.81
CDK5RAP3-209ENST00000578663 NEUROD1Q13562 356 aa10□□□□□ -0.81
CDK5RAP3-209ENST00000578663 EYA1Q99502 592 aa10□□□□□ -0.81
CDK5RAP3-209ENST00000578663 RBM42Q9BTD8 480 aaKnown RBP10□□□□□ -0.81
CDK5RAP3-209ENST00000578663 ARFGEF2Q9Y6D5 1785 aa10□□□□□ -0.81
CDK5RAP3-209ENST00000578663 SLX4Q8IY92 1834 aa9.99□□□□□ -0.81
CDK5RAP3-209ENST00000578663 ST20-MTHFSA0A0A6YYL1 179 aa9.99□□□□□ -0.81
CDK5RAP3-209ENST00000578663 TM4SF1P30408 202 aa9.99□□□□□ -0.81
CDK5RAP3-209ENST00000578663 EPHX2P34913 555 aa9.99□□□□□ -0.81
CDK5RAP3-209ENST00000578663 CRKLP46109 303 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-209ENST00000578663 CTU1Q7Z7A3 348 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms