RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-210	ENST00000578557	RGL2	O15211	777 aa		11.27	□□□□□ -0.61
PPP4R1-210	ENST00000578557	KIF12	Q96FN5	646 aa		11.27	□□□□□ -0.61
PPP4R1-210	ENST00000578557	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.27	□□□□□ -0.61
PPP4R1-210	ENST00000578557	KDM6A	O15550	1401 aa	Predicted RBP	11.26	□□□□□ -0.61
PPP4R1-210	ENST00000578557	PKD1L3	Q7Z443	1732 aa		11.26	□□□□□ -0.61
PPP4R1-210	ENST00000578557		A0A087WZG4	1122 aa		11.26	□□□□□ -0.61
PPP4R1-210	ENST00000578557	PYGB	P11216	843 aa		11.26	□□□□□ -0.61
PPP4R1-210	ENST00000578557	CHRM1	P11229	460 aa	Predicted RBP	11.26	□□□□□ -0.61
PPP4R1-210	ENST00000578557	TNS1	Q9HBL0	1735 aa	Known RBP	11.26	□□□□□ -0.61
PPP4R1-210	ENST00000578557	PTCD1	O75127	700 aa	Known RBP	11.25	□□□□□ -0.61
PPP4R1-210	ENST00000578557	SNRPA1	P09661	255 aa	Known RBP	11.25	□□□□□ -0.61
PPP4R1-210	ENST00000578557	RIPK4	P57078	832 aa		11.25	□□□□□ -0.61
PPP4R1-210	ENST00000578557	ADAMTS8	Q9UP79	889 aa		11.25	□□□□□ -0.61
PPP4R1-210	ENST00000578557	PNPLA7	Q6ZV29	1317 aa		11.25	□□□□□ -0.61
PPP4R1-210	ENST00000578557	RFC4	P35249	363 aa		11.24	□□□□□ -0.61
PPP4R1-210	ENST00000578557	TMPO	P42166	694 aa	Known RBP	11.24	□□□□□ -0.61
PPP4R1-210	ENST00000578557	ZNF827	Q17R98	1081 aa		11.24	□□□□□ -0.61
PPP4R1-210	ENST00000578557	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.23	□□□□□ -0.61
PPP4R1-210	ENST00000578557	GNPAT	O15228	680 aa		11.23	□□□□□ -0.61
PPP4R1-210	ENST00000578557	LINC00116	Q8NCU8	138 aa		11.23	□□□□□ -0.61
PPP4R1-210	ENST00000578557	ARX	Q96QS3	562 aa		11.23	□□□□□ -0.61
PPP4R1-210	ENST00000578557	SGIP1	Q9BQI5	828 aa		11.23	□□□□□ -0.61
PPP4R1-210	ENST00000578557	CCDC87	Q9NVE4	849 aa		11.23	□□□□□ -0.61
PPP4R1-210	ENST00000578557	MAP3K13	O43283	966 aa		11.22	□□□□□ -0.61
PPP4R1-210	ENST00000578557	ZPR1	O75312	459 aa		11.22	□□□□□ -0.61
PPP4R1-210	ENST00000578557	GABBR2	O75899	941 aa		11.22	□□□□□ -0.61
PPP4R1-210	ENST00000578557	CYP19A1	P11511	503 aa	Predicted RBP	11.22	□□□□□ -0.61
PPP4R1-210	ENST00000578557	MRC1	P22897	1456 aa		11.22	□□□□□ -0.61
PPP4R1-210	ENST00000578557	IL6ST	P40189	918 aa	Predicted RBP	11.22	□□□□□ -0.61
PPP4R1-210	ENST00000578557	CRKL	P46109	303 aa	Known RBP	11.22	□□□□□ -0.61
PPP4R1-210	ENST00000578557	ITPK1	Q13572	414 aa		11.22	□□□□□ -0.61
PPP4R1-210	ENST00000578557	CCDC27	Q2M243	656 aa		11.22	□□□□□ -0.61
PPP4R1-210	ENST00000578557	COL23A1	Q86Y22	540 aa	Predicted RBP	11.22	□□□□□ -0.61
PPP4R1-210	ENST00000578557	HEG1	Q9ULI3	1381 aa		11.21	□□□□□ -0.61
PPP4R1-210	ENST00000578557	SOS1	Q07889	1333 aa	Predicted RBP	11.21	□□□□□ -0.61
PPP4R1-210	ENST00000578557	ZBTB7A	O95365	584 aa		11.21	□□□□□ -0.61
PPP4R1-210	ENST00000578557	PTGER2	P43116	358 aa		11.21	□□□□□ -0.61
PPP4R1-210	ENST00000578557	MCM10	Q7L590	875 aa		11.21	□□□□□ -0.61
PPP4R1-210	ENST00000578557	CD2AP	Q9Y5K6	639 aa		11.21	□□□□□ -0.61
PPP4R1-210	ENST00000578557	RREB1	Q92766	1687 aa		11.2	□□□□□ -0.62
PPP4R1-210	ENST00000578557	ERBB4	Q15303	1308 aa		11.2	□□□□□ -0.62
PPP4R1-210	ENST00000578557	HOXB7	P09629	217 aa		11.2	□□□□□ -0.62
PPP4R1-210	ENST00000578557	SLC39A6	Q13433	755 aa		11.2	□□□□□ -0.62
PPP4R1-210	ENST00000578557	CLEC4G	Q6UXB4	293 aa		11.2	□□□□□ -0.62
PPP4R1-210	ENST00000578557	ARHGEF1	Q92888	912 aa	Known RBP	11.2	□□□□□ -0.62
PPP4R1-210	ENST00000578557	ZNF496	Q96IT1	587 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP4R1-210	ENST00000578557	SLC4A9	Q96Q91	983 aa		11.2	□□□□□ -0.62
PPP4R1-210	ENST00000578557	MRS2	Q9HD23	443 aa		11.2	□□□□□ -0.62
PPP4R1-210	ENST00000578557	PDZRN3	Q9UPQ7	1066 aa		11.2	□□□□□ -0.62
PPP4R1-210	ENST00000578557	SBF2	Q86WG5	1849 aa		11.2	□□□□□ -0.62
PPP4R1-210	ENST00000578557	ECM2	O94769	699 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP4R1-210	ENST00000578557	KCNQ4	P56696	695 aa		11.19	□□□□□ -0.62
PPP4R1-210	ENST00000578557	INTS5	Q6P9B9	1019 aa	Known RBP	11.19	□□□□□ -0.62
PPP4R1-210	ENST00000578557	DNAJC10	Q8IXB1	793 aa		11.19	□□□□□ -0.62
PPP4R1-210	ENST00000578557	CFAP44	Q96MT7	982 aa		11.19	□□□□□ -0.62
PPP4R1-210	ENST00000578557	PCDHB13	Q9Y5F0	798 aa		11.19	□□□□□ -0.62
PPP4R1-210	ENST00000578557	CCER2	I3L3R5	266 aa		11.18	□□□□□ -0.62
PPP4R1-210	ENST00000578557	CHL1	O00533	1208 aa		11.18	□□□□□ -0.62
PPP4R1-210	ENST00000578557	EIF5	P55010	431 aa	Known RBP	11.18	□□□□□ -0.62
PPP4R1-210	ENST00000578557	GNAI1	P63096	354 aa		11.18	□□□□□ -0.62
PPP4R1-210	ENST00000578557	MS4A3	Q96HJ5	214 aa		11.18	□□□□□ -0.62
PPP4R1-210	ENST00000578557	NARF	Q9UHQ1	456 aa		11.18	□□□□□ -0.62
PPP4R1-210	ENST00000578557	TSPYL4	Q9UJ04	414 aa		11.18	□□□□□ -0.62
PPP4R1-210	ENST00000578557	ZNF831	Q5JPB2	1677 aa		11.17	□□□□□ -0.62
PPP4R1-210	ENST00000578557	BTAF1	O14981	1849 aa		11.17	□□□□□ -0.62
PPP4R1-210	ENST00000578557	KAT6B	Q8WYB5	2073 aa		11.17	□□□□□ -0.62
PPP4R1-210	ENST00000578557	GALR2	O43603	387 aa	Predicted RBP	11.17	□□□□□ -0.62
PPP4R1-210	ENST00000578557	GIGYF1	O75420	1035 aa	Predicted RBP	11.17	□□□□□ -0.62
PPP4R1-210	ENST00000578557	EIF4A1	P60842	406 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-210	ENST00000578557	TGFB2	P61812	414 aa		11.17	□□□□□ -0.62
PPP4R1-210	ENST00000578557	ZNF652	Q9Y2D9	606 aa		11.17	□□□□□ -0.62
PPP4R1-210	ENST00000578557	PARP3	Q9Y6F1	533 aa		11.17	□□□□□ -0.62
PPP4R1-210	ENST00000578557	RGPD2	P0DJD1	1756 aa		11.17	□□□□□ -0.62
PPP4R1-210	ENST00000578557	IL16	Q14005	1332 aa		11.16	□□□□□ -0.62
PPP4R1-210	ENST00000578557	SHANK3	Q9BYB0	1731 aa		11.16	□□□□□ -0.62
PPP4R1-210	ENST00000578557	PHF14	O94880	888 aa		11.16	□□□□□ -0.62
PPP4R1-210	ENST00000578557	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.16	□□□□□ -0.62
PPP4R1-210	ENST00000578557	WDR63	Q8IWG1	891 aa		11.16	□□□□□ -0.62
PPP4R1-210	ENST00000578557	SYT17	Q9BSW7	474 aa		11.16	□□□□□ -0.62
PPP4R1-210	ENST00000578557	IFT57	Q9NWB7	429 aa		11.16	□□□□□ -0.62
PPP4R1-210	ENST00000578557	LRP5	O75197	1615 aa		11.16	□□□□□ -0.62
PPP4R1-210	ENST00000578557	NUP188	Q5SRE5	1749 aa		11.15	□□□□□ -0.62
PPP4R1-210	ENST00000578557	DOT1L	Q8TEK3	1739 aa		11.15	□□□□□ -0.62
PPP4R1-210	ENST00000578557	USP42	Q9H9J4	1324 aa	Known RBP	11.15	□□□□□ -0.62
PPP4R1-210	ENST00000578557	ERVV-1	B6SEH8	477 aa		11.15	□□□□□ -0.62
PPP4R1-210	ENST00000578557	APAF1	O14727	1248 aa		11.15	□□□□□ -0.62
PPP4R1-210	ENST00000578557	GRIN3B	O60391	1043 aa		11.15	□□□□□ -0.62
PPP4R1-210	ENST00000578557	GYS1	P13807	737 aa		11.15	□□□□□ -0.62
PPP4R1-210	ENST00000578557	DCTN1	Q14203	1278 aa		11.15	□□□□□ -0.62
PPP4R1-210	ENST00000578557	RTN4	Q9NQC3	1192 aa	Known RBP	11.15	□□□□□ -0.62
PPP4R1-210	ENST00000578557	TRIM35	Q9UPQ4	493 aa		11.15	□□□□□ -0.62
PPP4R1-210	ENST00000578557	PAPPA	Q13219	1627 aa		11.15	□□□□□ -0.62
PPP4R1-210	ENST00000578557	ADAMTS7	Q9UKP4	1686 aa		11.14	□□□□□ -0.63
PPP4R1-210	ENST00000578557	IFNL1	Q8IU54	200 aa		11.14	□□□□□ -0.63
PPP4R1-210	ENST00000578557	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.14	□□□□□ -0.63
PPP4R1-210	ENST00000578557	USP16	Q9Y5T5	823 aa		11.14	□□□□□ -0.63
PPP4R1-210	ENST00000578557	LY75	O60449	1722 aa		11.13	□□□□□ -0.63
PPP4R1-210	ENST00000578557	ZNF853	P0CG23	659 aa		11.13	□□□□□ -0.63
PPP4R1-210	ENST00000578557	CANX	P27824	592 aa	Known RBP	11.13	□□□□□ -0.63
PPP4R1-210	ENST00000578557	TM4SF1	P30408	202 aa		11.13	□□□□□ -0.63

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