RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 USP16Q9Y5T5 823 aa16.72■□□□□ 0.27
CTC1-205ENST00000578537 ARFGEF2Q9Y6D5 1785 aa16.72■□□□□ 0.27
CTC1-205ENST00000578537 BCAR3O75815 825 aa16.71■□□□□ 0.27
CTC1-205ENST00000578537 ANXA1P04083 346 aa16.71■□□□□ 0.27
CTC1-205ENST00000578537 PIP4K2AP48426 406 aaPredicted RBP16.71■□□□□ 0.27
CTC1-205ENST00000578537 RARSP54136 660 aaKnown RBP16.71■□□□□ 0.27
CTC1-205ENST00000578537 PROSER3Q2NL68 480 aa16.71■□□□□ 0.27
CTC1-205ENST00000578537 SSH1Q8WYL5 1049 aa16.71■□□□□ 0.27
CTC1-205ENST00000578537 LOC102724428A0A0B4J2F2 783 aa16.7■□□□□ 0.26
CTC1-205ENST00000578537 SIK1P57059 783 aa16.7■□□□□ 0.26
CTC1-205ENST00000578537 NBPF14Q5TI25 921 aa16.7■□□□□ 0.26
CTC1-205ENST00000578537 RCAN3Q9UKA8 241 aa16.7■□□□□ 0.26
CTC1-205ENST00000578537 BCORQ6W2J9 1755 aa16.69■□□□□ 0.26
CTC1-205ENST00000578537 EIF2S2P20042 333 aaKnown RBP16.69■□□□□ 0.26
CTC1-205ENST00000578537 TNNQ9UQP3 1299 aa16.69■□□□□ 0.26
CTC1-205ENST00000578537 CENPBP07199 599 aaPredicted RBP16.68■□□□□ 0.26
CTC1-205ENST00000578537 HOXB7P09629 217 aa16.68■□□□□ 0.26
CTC1-205ENST00000578537 SNRPA1P09661 255 aaKnown RBP16.68■□□□□ 0.26
CTC1-205ENST00000578537 PDIA6Q15084 440 aa16.68■□□□□ 0.26
CTC1-205ENST00000578537 HDGFL1Q5TGJ6 251 aa16.68■□□□□ 0.26
CTC1-205ENST00000578537 G2E3Q7L622 706 aa16.68■□□□□ 0.26
CTC1-205ENST00000578537 PROM2Q8N271 834 aa16.68■□□□□ 0.26
CTC1-205ENST00000578537 LINC00116Q8NCU8 138 aa16.68■□□□□ 0.26
CTC1-205ENST00000578537 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
CTC1-205ENST00000578537 LRRC4BQ9NT99 713 aa16.68■□□□□ 0.26
CTC1-205ENST00000578537 NBPF26B4DH59 902 aa16.67■□□□□ 0.26
CTC1-205ENST00000578537 NBPF10Q6P3W6 841 aaKnown RBP16.67■□□□□ 0.26
CTC1-205ENST00000578537 LRP10Q7Z4F1 713 aa16.67■□□□□ 0.26
CTC1-205ENST00000578537 MRPL50Q8N5N7 158 aaKnown RBP16.67■□□□□ 0.26
CTC1-205ENST00000578537 NBPF15Q8N660 670 aa16.67■□□□□ 0.26
CTC1-205ENST00000578537 SPON1Q9HCB6 807 aa16.67■□□□□ 0.26
CTC1-205ENST00000578537 CHPF2Q9P2E5 772 aa16.67■□□□□ 0.26
CTC1-205ENST00000578537 PPP1R1BQ9UD71 204 aaPredicted RBP16.67■□□□□ 0.26
CTC1-205ENST00000578537 SCN7AQ01118 1682 aa16.66■□□□□ 0.26
CTC1-205ENST00000578537 DCAF8L1A6NGE4 600 aa16.66■□□□□ 0.26
CTC1-205ENST00000578537 CT47B1P0C2W7 299 aaPredicted RBP16.66■□□□□ 0.26
CTC1-205ENST00000578537 CYP19A1P11511 503 aaPredicted RBP16.66■□□□□ 0.26
CTC1-205ENST00000578537 ATP6V1AP38606 617 aa16.66■□□□□ 0.26
CTC1-205ENST00000578537 VSIG10Q8N0Z9 540 aa16.66■□□□□ 0.26
CTC1-205ENST00000578537 ANKRD36CQ5JPF3 1778 aa16.66■□□□□ 0.26
CTC1-205ENST00000578537 SOS1Q07889 1333 aaPredicted RBP16.66■□□□□ 0.26
CTC1-205ENST00000578537 A1BGP04217 495 aa16.65■□□□□ 0.26
CTC1-205ENST00000578537 AMIGO3Q86WK7 504 aa16.65■□□□□ 0.26
CTC1-205ENST00000578537 SMC4Q9NTJ3 1288 aa16.65■□□□□ 0.26
CTC1-205ENST00000578537 CCNL1Q9UK58 526 aaPredicted RBP16.65■□□□□ 0.26
CTC1-205ENST00000578537 NUP98P52948 1817 aa16.64■□□□□ 0.25
CTC1-205ENST00000578537 AFDNP55196 1824 aaKnown RBP16.64■□□□□ 0.25
CTC1-205ENST00000578537 PLIN1O60240 522 aa16.64■□□□□ 0.25
CTC1-205ENST00000578537 SMIM5Q71RC9 77 aa16.64■□□□□ 0.25
CTC1-205ENST00000578537 ZBTB1Q9Y2K1 713 aa16.64■□□□□ 0.25
CTC1-205ENST00000578537 RNF123Q5XPI4 1314 aa16.64■□□□□ 0.25
CTC1-205ENST00000578537 QSER1Q2KHR3 1735 aa16.63■□□□□ 0.25
CTC1-205ENST00000578537 TXNRD1Q16881 649 aa16.63■□□□□ 0.25
CTC1-205ENST00000578537 ALDH1L2Q3SY69 923 aa16.63■□□□□ 0.25
CTC1-205ENST00000578537 INTS5Q6P9B9 1019 aaKnown RBP16.63■□□□□ 0.25
CTC1-205ENST00000578537 PHAXQ9H814 394 aaKnown RBP16.63■□□□□ 0.25
CTC1-205ENST00000578537 SUPT16HQ9Y5B9 1047 aaKnown RBP16.63■□□□□ 0.25
CTC1-205ENST00000578537 CRKLP46109 303 aaKnown RBP16.62■□□□□ 0.25
CTC1-205ENST00000578537 CCDC30Q5VVM6 783 aa16.62■□□□□ 0.25
CTC1-205ENST00000578537 PLSCR1O15162 318 aa16.61■□□□□ 0.25
CTC1-205ENST00000578537 RRP1P56182 461 aaKnown RBP16.61■□□□□ 0.25
CTC1-205ENST00000578537 CASZ1Q86V15 1759 aa16.61■□□□□ 0.25
CTC1-205ENST00000578537 MYL6BP14649 208 aa16.6■□□□□ 0.25
CTC1-205ENST00000578537 C20orf194Q5TEA3 1177 aa16.6■□□□□ 0.25
CTC1-205ENST00000578537 ZNF428Q96B54 188 aa16.6■□□□□ 0.25
CTC1-205ENST00000578537 DDX21Q9NR30 783 aaKnown RBP eCLIP16.6■□□□□ 0.25
CTC1-205ENST00000578537 CNTNAP4Q9C0A0 1308 aa16.6■□□□□ 0.25
CTC1-205ENST00000578537 ADCY9O60503 1353 aa16.6■□□□□ 0.25
CTC1-205ENST00000578537 SLC4A2P04920 1241 aa16.59■□□□□ 0.25
CTC1-205ENST00000578537 BRPF1P55201 1214 aaPredicted RBP16.59■□□□□ 0.25
CTC1-205ENST00000578537 ZNF827Q17R98 1081 aa16.59■□□□□ 0.25
CTC1-205ENST00000578537 CCDC87Q9NVE4 849 aa16.59■□□□□ 0.25
CTC1-205ENST00000578537 NOB1Q9ULX3 412 aaKnown RBP16.59■□□□□ 0.25
CTC1-205ENST00000578537 ERBB4Q15303 1308 aa16.59■□□□□ 0.25
CTC1-205ENST00000578537 RLBP1P12271 317 aa16.58■□□□□ 0.24
CTC1-205ENST00000578537 CANXP27824 592 aaKnown RBP16.58■□□□□ 0.24
CTC1-205ENST00000578537 XAGE3Q8WTP9 111 aa16.58■□□□□ 0.24
CTC1-205ENST00000578537 ANO8Q9HCE9 1232 aaPredicted RBP16.58■□□□□ 0.24
CTC1-205ENST00000578537 DBF4Q9UBU7 674 aaPredicted RBP16.58■□□□□ 0.24
CTC1-205ENST00000578537 TRIM27P14373 513 aa16.57■□□□□ 0.24
CTC1-205ENST00000578537 IRX6P78412 446 aaPredicted RBP16.57■□□□□ 0.24
CTC1-205ENST00000578537 FLIIQ13045 1269 aa16.57■□□□□ 0.24
CTC1-205ENST00000578537 TTLL7Q6ZT98 887 aa16.57■□□□□ 0.24
CTC1-205ENST00000578537 FRAT1Q92837 279 aaPredicted RBP16.57■□□□□ 0.24
CTC1-205ENST00000578537 STK31Q9BXU1 1019 aa16.57■□□□□ 0.24
CTC1-205ENST00000578537 TEX13AQ9BXU3 409 aaPredicted RBP16.57■□□□□ 0.24
CTC1-205ENST00000578537 UTRNP46939 3433 aa16.57■□□□□ 0.24
CTC1-205ENST00000578537 COL15A1P39059 1388 aa16.56■□□□□ 0.24
CTC1-205ENST00000578537 KIF16BQ96L93 1317 aa16.56■□□□□ 0.24
CTC1-205ENST00000578537 F6X3S4 739 aa16.56■□□□□ 0.24
CTC1-205ENST00000578537 STARD3NLO95772 234 aa16.56■□□□□ 0.24
CTC1-205ENST00000578537 SLC27A3Q5K4L6 730 aa16.56■□□□□ 0.24
CTC1-205ENST00000578537 CHD4Q14839 1912 aa16.56■□□□□ 0.24
CTC1-205ENST00000578537 COL24A1Q17RW2 1714 aa16.56■□□□□ 0.24
CTC1-205ENST00000578537 AIMP1Q12904 312 aaKnown RBP16.55■□□□□ 0.24
CTC1-205ENST00000578537 ZNF330Q9Y3S2 320 aaPredicted RBP16.55■□□□□ 0.24
CTC1-205ENST00000578537 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
CTC1-205ENST00000578537 ABCC4O15439 1325 aa16.54■□□□□ 0.24
CTC1-205ENST00000578537 EIF5P55010 431 aaKnown RBP16.54■□□□□ 0.24
CTC1-205ENST00000578537 COPS6Q7L5N1 327 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms