RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 INTS5Q6P9B9 1019 aaKnown RBP18.05■□□□□ 0.48
CSNK1D-208ENST00000578501 DNAJC10Q8IXB1 793 aa18.05■□□□□ 0.48
CSNK1D-208ENST00000578501 CYP19A1P11511 503 aaPredicted RBP18.04■□□□□ 0.48
CSNK1D-208ENST00000578501 ARHGEF1Q92888 912 aaKnown RBP18.04■□□□□ 0.48
CSNK1D-208ENST00000578501 ZNF496Q96IT1 587 aaPredicted RBP18.04■□□□□ 0.48
CSNK1D-208ENST00000578501 TEX13AQ9BXU3 409 aaPredicted RBP18.04■□□□□ 0.48
CSNK1D-208ENST00000578501 MYH14Q7Z406 1995 aaKnown RBP18.03■□□□□ 0.48
CSNK1D-208ENST00000578501 DCTN1Q14203 1278 aa18.03■□□□□ 0.48
CSNK1D-208ENST00000578501 WDR43Q15061 677 aaKnown RBP eCLIP18.03■□□□□ 0.48
CSNK1D-208ENST00000578501 FMNL2Q96PY5 1086 aa18.03■□□□□ 0.48
CSNK1D-208ENST00000578501 CCDC87Q9NVE4 849 aa18.03■□□□□ 0.48
CSNK1D-208ENST00000578501 HEG1Q9ULI3 1381 aa18.03■□□□□ 0.48
CSNK1D-208ENST00000578501 STARD3NLO95772 234 aa18.02■□□□□ 0.48
CSNK1D-208ENST00000578501 RFC4P35249 363 aa18.02■□□□□ 0.48
CSNK1D-208ENST00000578501 TAF7Q15545 349 aaPredicted RBP18.02■□□□□ 0.48
CSNK1D-208ENST00000578501 DNAJC5GQ8N7S2 189 aa18.02■□□□□ 0.48
CSNK1D-208ENST00000578501 ADAMTS8Q9UP79 889 aa18.01■□□□□ 0.47
CSNK1D-208ENST00000578501 KCNQ3O43525 872 aa18■□□□□ 0.47
CSNK1D-208ENST00000578501 NLGN1Q8N2Q7 840 aa18■□□□□ 0.47
CSNK1D-208ENST00000578501 PNISRQ8TF01 805 aaKnown RBP18■□□□□ 0.47
CSNK1D-208ENST00000578501 WWC3Q9ULE0 1092 aa18■□□□□ 0.47
CSNK1D-208ENST00000578501 SOS1Q07889 1333 aaPredicted RBP17.99■□□□□ 0.47
CSNK1D-208ENST00000578501 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
CSNK1D-208ENST00000578501 RUNDC1Q96C34 613 aa17.99■□□□□ 0.47
CSNK1D-208ENST00000578501 DLG5Q8TDM6 1919 aa17.99■□□□□ 0.47
CSNK1D-208ENST00000578501 RIPK4P57078 832 aa17.98■□□□□ 0.47
CSNK1D-208ENST00000578501 LMOD3Q0VAK6 560 aa17.98■□□□□ 0.47
CSNK1D-208ENST00000578501 GYS1P13807 737 aa17.97■□□□□ 0.47
CSNK1D-208ENST00000578501 ZBTB1Q9Y2K1 713 aa17.97■□□□□ 0.47
CSNK1D-208ENST00000578501 USP42Q9H9J4 1324 aaKnown RBP17.97■□□□□ 0.47
CSNK1D-208ENST00000578501 ANP32CO43423 234 aa17.96■□□□□ 0.47
CSNK1D-208ENST00000578501 SNRPA1P09661 255 aaKnown RBP17.96■□□□□ 0.47
CSNK1D-208ENST00000578501 TGFB2P61812 414 aa17.96■□□□□ 0.47
CSNK1D-208ENST00000578501 CCDC146Q8IYE0 955 aa17.96■□□□□ 0.47
CSNK1D-208ENST00000578501 C4AP0C0L4 1744 aa17.95■□□□□ 0.46
CSNK1D-208ENST00000578501 EIF5P55010 431 aaKnown RBP17.95■□□□□ 0.46
CSNK1D-208ENST00000578501 THUMPD2Q9BTF0 503 aaKnown RBP17.95■□□□□ 0.46
CSNK1D-208ENST00000578501 BABAM1Q9NWV8 329 aa17.95■□□□□ 0.46
CSNK1D-208ENST00000578501 COL15A1P39059 1388 aa17.94■□□□□ 0.46
CSNK1D-208ENST00000578501 MMP10P09238 476 aa17.94■□□□□ 0.46
CSNK1D-208ENST00000578501 C16orf71Q8IYS4 520 aaPredicted RBP17.94■□□□□ 0.46
CSNK1D-208ENST00000578501 RBM46Q8TBY0 533 aaKnown RBP17.94■□□□□ 0.46
CSNK1D-208ENST00000578501 NARFQ9UHQ1 456 aa17.94■□□□□ 0.46
CSNK1D-208ENST00000578501 A0A087WZG4 1122 aa17.93■□□□□ 0.46
CSNK1D-208ENST00000578501 ZPR1O75312 459 aa17.93■□□□□ 0.46
CSNK1D-208ENST00000578501 CANXP27824 592 aaKnown RBP17.93■□□□□ 0.46
CSNK1D-208ENST00000578501 IL6STP40189 918 aaPredicted RBP17.93■□□□□ 0.46
CSNK1D-208ENST00000578501 KLRG1Q96E93 195 aa17.93■□□□□ 0.46
CSNK1D-208ENST00000578501 MIS18AQ9NYP9 233 aa17.93■□□□□ 0.46
CSNK1D-208ENST00000578501 SRP68Q9UHB9 627 aaKnown RBP17.93■□□□□ 0.46
CSNK1D-208ENST00000578501 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
CSNK1D-208ENST00000578501 USP16Q9Y5T5 823 aa17.92■□□□□ 0.46
CSNK1D-208ENST00000578501 A1BGP04217 495 aa17.91■□□□□ 0.46
CSNK1D-208ENST00000578501 EIF4A1P60842 406 aaKnown RBP17.91■□□□□ 0.46
CSNK1D-208ENST00000578501 FSTL1Q12841 308 aa17.91■□□□□ 0.46
CSNK1D-208ENST00000578501 FKBP8Q14318 412 aa17.91■□□□□ 0.46
CSNK1D-208ENST00000578501 ARHGAP27Q6ZUM4 889 aa17.91■□□□□ 0.46
CSNK1D-208ENST00000578501 JMYQ8N9B5 988 aa17.91■□□□□ 0.46
CSNK1D-208ENST00000578501 TRIM35Q9UPQ4 493 aa17.91■□□□□ 0.46
CSNK1D-208ENST00000578501 RRP7AQ9Y3A4 280 aaKnown RBP17.91■□□□□ 0.46
CSNK1D-208ENST00000578501 KDM3BQ7LBC6 1761 aa17.9■□□□□ 0.46
CSNK1D-208ENST00000578501 PRAMEF22A3QJZ6 481 aa17.9■□□□□ 0.46
CSNK1D-208ENST00000578501 CCDC184Q52MB2 194 aa17.9■□□□□ 0.46
CSNK1D-208ENST00000578501 USPL1Q5W0Q7 1092 aa17.9■□□□□ 0.46
CSNK1D-208ENST00000578501 NMRK2Q9NPI5 230 aa17.9■□□□□ 0.46
CSNK1D-208ENST00000578501 PARP3Q9Y6F1 533 aa17.9■□□□□ 0.46
CSNK1D-208ENST00000578501 TM4SF1P30408 202 aa17.89■□□□□ 0.45
CSNK1D-208ENST00000578501 NEUROD2Q15784 382 aa17.89■□□□□ 0.45
CSNK1D-208ENST00000578501 COL13A1Q5TAT6 717 aaPredicted RBP17.89■□□□□ 0.45
CSNK1D-208ENST00000578501 TSPYL4Q9UJ04 414 aa17.89■□□□□ 0.45
CSNK1D-208ENST00000578501 PXDNLA1KZ92 1463 aa17.88■□□□□ 0.45
CSNK1D-208ENST00000578501 NPM2Q86SE8 214 aaKnown RBP17.88■□□□□ 0.45
CSNK1D-208ENST00000578501 TNS4Q8IZW8 715 aa17.88■□□□□ 0.45
CSNK1D-208ENST00000578501 A0A0G2JLW4 131 aa17.87■□□□□ 0.45
CSNK1D-208ENST00000578501 BCL2L12Q9HB09 334 aa17.87■□□□□ 0.45
CSNK1D-208ENST00000578501 CHL1O00533 1208 aa17.86■□□□□ 0.45
CSNK1D-208ENST00000578501 APAF1O14727 1248 aa17.86■□□□□ 0.45
CSNK1D-208ENST00000578501 PRELPP51888 382 aa17.86■□□□□ 0.45
CSNK1D-208ENST00000578501 DDR1Q08345 913 aa17.86■□□□□ 0.45
CSNK1D-208ENST00000578501 MRS2Q9HD23 443 aa17.86■□□□□ 0.45
CSNK1D-208ENST00000578501 KDM2BQ8NHM5 1336 aa17.86■□□□□ 0.45
CSNK1D-208ENST00000578501 WDR90Q96KV7 1748 aa17.86■□□□□ 0.45
CSNK1D-208ENST00000578501 POLRMTO00411 1230 aaKnown RBP17.85■□□□□ 0.45
CSNK1D-208ENST00000578501 CAPN15O75808 1086 aa17.85■□□□□ 0.45
CSNK1D-208ENST00000578501 NFIXQ14938 502 aa17.85■□□□□ 0.45
CSNK1D-208ENST00000578501 C10orf71Q711Q0 1435 aa17.85■□□□□ 0.45
CSNK1D-208ENST00000578501 KIF13BQ9NQT8 1826 aa17.84■□□□□ 0.45
CSNK1D-208ENST00000578501 NBPF26B4DH59 902 aa17.84■□□□□ 0.45
CSNK1D-208ENST00000578501 RGL2O15211 777 aa17.84■□□□□ 0.45
CSNK1D-208ENST00000578501 C9orf131Q5VYM1 1079 aa17.84■□□□□ 0.45
CSNK1D-208ENST00000578501 NBPF10Q6P3W6 841 aaKnown RBP17.84■□□□□ 0.45
CSNK1D-208ENST00000578501 NBPF15Q8N660 670 aa17.84■□□□□ 0.45
CSNK1D-208ENST00000578501 TBC1D2BQ9UPU7 963 aa17.84■□□□□ 0.45
CSNK1D-208ENST00000578501 ZNF330Q9Y3S2 320 aaPredicted RBP17.84■□□□□ 0.45
CSNK1D-208ENST00000578501 CAMTA2O94983 1202 aa17.83■□□□□ 0.44
CSNK1D-208ENST00000578501 DPEP1P16444 411 aa17.83■□□□□ 0.44
CSNK1D-208ENST00000578501 LAMB4A4D0S4 1761 aa17.83■□□□□ 0.44
CSNK1D-208ENST00000578501 ERBB4Q15303 1308 aa17.82■□□□□ 0.44
CSNK1D-208ENST00000578501 CALD1Q05682 793 aaKnown RBP17.82■□□□□ 0.44
CSNK1D-208ENST00000578501 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms