RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 HSP90AB1P08238 724 aaKnown RBP21.5■■□□□ 1.03
SREBF1-218ENST00000578469 TMEM57Q8N5G2 664 aa21.5■■□□□ 1.03
SREBF1-218ENST00000578469 STK31Q9BXU1 1019 aa21.5■■□□□ 1.03
SREBF1-218ENST00000578469 FHDC1Q9C0D6 1143 aaPredicted RBP21.5■■□□□ 1.03
SREBF1-218ENST00000578469 PHKG2P15735 406 aa21.49■■□□□ 1.03
SREBF1-218ENST00000578469 CCDC30Q5VVM6 783 aa21.49■■□□□ 1.03
SREBF1-218ENST00000578469 PTPRCP08575 1304 aa21.49■■□□□ 1.03
SREBF1-218ENST00000578469 KDM2BQ8NHM5 1336 aa21.49■■□□□ 1.03
SREBF1-218ENST00000578469 ZNF784Q8NCA9 323 aaPredicted RBP21.48■■□□□ 1.03
SREBF1-218ENST00000578469 SYT17Q9BSW7 474 aa21.48■■□□□ 1.03
SREBF1-218ENST00000578469 SLC4A2P04920 1241 aa21.46■■□□□ 1.03
SREBF1-218ENST00000578469 HOXB7P09629 217 aa21.46■■□□□ 1.03
SREBF1-218ENST00000578469 ACSBG1Q96GR2 724 aa21.46■■□□□ 1.03
SREBF1-218ENST00000578469 ABCC4O15439 1325 aa21.46■■□□□ 1.03
SREBF1-218ENST00000578469 IL2RBP14784 551 aa21.45■■□□□ 1.02
SREBF1-218ENST00000578469 EIF4A1P60842 406 aaKnown RBP21.45■■□□□ 1.02
SREBF1-218ENST00000578469 DCAF5Q96JK2 942 aa21.45■■□□□ 1.02
SREBF1-218ENST00000578469 TSHZ2Q9NRE2 1034 aa21.45■■□□□ 1.02
SREBF1-218ENST00000578469 ADAMTS7Q9UKP4 1686 aa21.44■■□□□ 1.02
SREBF1-218ENST00000578469 PKD1L3Q7Z443 1732 aa21.44■■□□□ 1.02
SREBF1-218ENST00000578469 KDM3BQ7LBC6 1761 aa21.44■■□□□ 1.02
SREBF1-218ENST00000578469 ZCRB1Q8TBF4 217 aaKnown RBP21.44■■□□□ 1.02
SREBF1-218ENST00000578469 ARXQ96QS3 562 aa21.44■■□□□ 1.02
SREBF1-218ENST00000578469 RWDD1Q9H446 243 aaPredicted RBP21.44■■□□□ 1.02
SREBF1-218ENST00000578469 CHD4Q14839 1912 aa21.44■■□□□ 1.02
SREBF1-218ENST00000578469 PAPPAQ13219 1627 aa21.44■■□□□ 1.02
SREBF1-218ENST00000578469 UTRNP46939 3433 aa21.43■■□□□ 1.02
SREBF1-218ENST00000578469 PCDH11XQ9BZA7 1347 aa21.43■■□□□ 1.02
SREBF1-218ENST00000578469 PCDH11YQ9BZA8 1340 aa21.43■■□□□ 1.02
SREBF1-218ENST00000578469 BTAF1O14981 1849 aa21.42■■□□□ 1.02
SREBF1-218ENST00000578469 SGIP1Q9BQI5 828 aa21.42■■□□□ 1.02
SREBF1-218ENST00000578469 SLC52A2Q9HAB3 445 aa21.42■■□□□ 1.02
SREBF1-218ENST00000578469 HDGFL1Q5TGJ6 251 aa21.41■■□□□ 1.02
SREBF1-218ENST00000578469 ZBTB40Q9NUA8 1239 aa21.41■■□□□ 1.02
SREBF1-218ENST00000578469 PCDHB15Q9Y5E8 787 aa21.41■■□□□ 1.02
SREBF1-218ENST00000578469 KDM6AO15550 1401 aaPredicted RBP21.4■■□□□ 1.02
SREBF1-218ENST00000578469 CYP27B1O15528 508 aa21.4■■□□□ 1.02
SREBF1-218ENST00000578469 INTS3Q68E01 1043 aaKnown RBP21.4■■□□□ 1.02
SREBF1-218ENST00000578469 VIRMAQ69YN4 1812 aaKnown RBP21.4■■□□□ 1.02
SREBF1-218ENST00000578469 KAT6BQ8WYB5 2073 aa21.4■■□□□ 1.02
SREBF1-218ENST00000578469 SCN11AQ9UI33 1791 aa21.39■■□□□ 1.01
SREBF1-218ENST00000578469 IGHDP01880 384 aa21.39■■□□□ 1.01
SREBF1-218ENST00000578469 ZBTB7BO15156 539 aaPredicted RBP21.38■■□□□ 1.01
SREBF1-218ENST00000578469 KCNQ3O43525 872 aa21.38■■□□□ 1.01
SREBF1-218ENST00000578469 SIPA1L3O60292 1781 aaPredicted RBP21.38■■□□□ 1.01
SREBF1-218ENST00000578469 CABP4P57796 275 aa21.37■■□□□ 1.01
SREBF1-218ENST00000578469 POLD1P28340 1107 aa21.36■■□□□ 1.01
SREBF1-218ENST00000578469 NECTIN2Q92692 538 aa21.36■■□□□ 1.01
SREBF1-218ENST00000578469 MRC1P22897 1456 aa21.35■■□□□ 1.01
SREBF1-218ENST00000578469 EIF2S2P20042 333 aaKnown RBP21.35■■□□□ 1.01
SREBF1-218ENST00000578469 CCT4P50991 539 aaKnown RBP21.35■■□□□ 1.01
SREBF1-218ENST00000578469 FLIIQ13045 1269 aa21.35■■□□□ 1.01
SREBF1-218ENST00000578469 HDAC1Q13547 482 aaPredicted RBP21.35■■□□□ 1.01
SREBF1-218ENST00000578469 GPR162Q16538 588 aa21.35■■□□□ 1.01
SREBF1-218ENST00000578469 ZNF827Q17R98 1081 aa21.35■■□□□ 1.01
SREBF1-218ENST00000578469 SLC27A3Q5K4L6 730 aa21.35■■□□□ 1.01
SREBF1-218ENST00000578469 G2E3Q7L622 706 aa21.35■■□□□ 1.01
SREBF1-218ENST00000578469 NFATC2IPQ8NCF5 419 aa21.35■■□□□ 1.01
SREBF1-218ENST00000578469 SLC16A10Q8TF71 515 aa21.35■■□□□ 1.01
SREBF1-218ENST00000578469 CACNA1FO60840 1977 aa21.35■■□□□ 1.01
SREBF1-218ENST00000578469 GIGYF1O75420 1035 aaPredicted RBP21.34■■□□□ 1.01
SREBF1-218ENST00000578469 FKBP5Q13451 457 aaPredicted RBP21.34■■□□□ 1.01
SREBF1-218ENST00000578469 NKX1-1Q15270 411 aaPredicted RBP21.34■■□□□ 1.01
SREBF1-218ENST00000578469 ZNF790Q6PG37 636 aa21.34■■□□□ 1.01
SREBF1-218ENST00000578469 TTC5Q8N0Z6 440 aa21.34■■□□□ 1.01
SREBF1-218ENST00000578469 KLHL34Q8N239 644 aa21.34■■□□□ 1.01
SREBF1-218ENST00000578469 HEG1Q9ULI3 1381 aa21.34■■□□□ 1.01
SREBF1-218ENST00000578469 QSER1Q2KHR3 1735 aa21.33■■□□□ 1.01
SREBF1-218ENST00000578469 ERVV-2B6SEH9 535 aa21.33■■□□□ 1.01
SREBF1-218ENST00000578469 C1QTNF8P60827 252 aa21.31■■□□□ 1
SREBF1-218ENST00000578469 DDX54Q8TDD1 881 aaKnown RBP21.31■■□□□ 1
SREBF1-218ENST00000578469 LRRC4BQ9NT99 713 aa21.31■■□□□ 1
SREBF1-218ENST00000578469 DBF4Q9UBU7 674 aaPredicted RBP21.31■■□□□ 1
SREBF1-218ENST00000578469 SLC4A10Q6U841 1118 aa21.3■■□□□ 1
SREBF1-218ENST00000578469 SLC39A6Q13433 755 aa21.29■■□□□ 1
SREBF1-218ENST00000578469 AKT1S1Q96B36 256 aa21.29■■□□□ 1
SREBF1-218ENST00000578469 SYTL4Q96C24 671 aaPredicted RBP21.29■■□□□ 1
SREBF1-218ENST00000578469 FMNL2Q96PY5 1086 aa21.29■■□□□ 1
SREBF1-218ENST00000578469 TFCP2L1Q9NZI6 479 aa21.29■■□□□ 1
SREBF1-218ENST00000578469 CHPF2Q9P2E5 772 aa21.29■■□□□ 1
SREBF1-218ENST00000578469 F6X3S4 739 aa21.27■■□□□ 1
SREBF1-218ENST00000578469 PNPLA7Q6ZV29 1317 aa21.27■□□□□ 0.99
SREBF1-218ENST00000578469 PXDNLA1KZ92 1463 aa21.26■□□□□ 0.99
SREBF1-218ENST00000578469 SNRPA1P09661 255 aaKnown RBP21.26■□□□□ 0.99
SREBF1-218ENST00000578469 HYPKQ9NX55 129 aa21.26■□□□□ 0.99
SREBF1-218ENST00000578469 DOT1LQ8TEK3 1739 aa21.25■□□□□ 0.99
SREBF1-218ENST00000578469 PHAXQ9H814 394 aaKnown RBP21.25■□□□□ 0.99
SREBF1-218ENST00000578469 COL24A1Q17RW2 1714 aa21.24■□□□□ 0.99
SREBF1-218ENST00000578469 RGS3P49796 1198 aa21.24■□□□□ 0.99
SREBF1-218ENST00000578469 RPAP2Q8IXW5 612 aaPredicted RBP21.24■□□□□ 0.99
SREBF1-218ENST00000578469 SMC5Q8IY18 1101 aa21.24■□□□□ 0.99
SREBF1-218ENST00000578469 ZNF496Q96IT1 587 aaPredicted RBP21.24■□□□□ 0.99
SREBF1-218ENST00000578469 C1orf115Q9H7X2 142 aa21.24■□□□□ 0.99
SREBF1-218ENST00000578469 DDX21Q9NR30 783 aaKnown RBP eCLIP21.24■□□□□ 0.99
SREBF1-218ENST00000578469 PDZRN3Q9UPQ7 1066 aa21.24■□□□□ 0.99
SREBF1-218ENST00000578469 RBM19Q9Y4C8 960 aaKnown RBP21.24■□□□□ 0.99
SREBF1-218ENST00000578469 SHANK3Q9BYB0 1731 aa21.24■□□□□ 0.99
SREBF1-218ENST00000578469 TUBGCP6Q96RT7 1819 aa21.23■□□□□ 0.99
SREBF1-218ENST00000578469 GNAI3P08754 354 aa21.23■□□□□ 0.99
SREBF1-218ENST00000578469 GCC1Q96CN9 775 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms