RNA–Protein interactions for RNA: ENST00000578294.1

NUP85-207, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-207ENST00000578294 USP42Q9H9J4 1324 aaKnown RBP17.1■□□□□ 0.33
NUP85-207ENST00000578294 ANP32CO43423 234 aa17.09■□□□□ 0.33
NUP85-207ENST00000578294 ZPR1O75312 459 aa17.09■□□□□ 0.33
NUP85-207ENST00000578294 SNRPA1P09661 255 aaKnown RBP17.09■□□□□ 0.33
NUP85-207ENST00000578294 TMPOP42166 694 aaKnown RBP17.09■□□□□ 0.33
NUP85-207ENST00000578294 ADAMTS8Q9UP79 889 aa17.09■□□□□ 0.33
NUP85-207ENST00000578294 ZBTB1Q9Y2K1 713 aa17.09■□□□□ 0.33
NUP85-207ENST00000578294 COL15A1P39059 1388 aa17.09■□□□□ 0.33
NUP85-207ENST00000578294 DLG5Q8TDM6 1919 aa17.09■□□□□ 0.33
NUP85-207ENST00000578294 C4AP0C0L4 1744 aa17.08■□□□□ 0.32
NUP85-207ENST00000578294 MMP10P09238 476 aa17.08■□□□□ 0.32
NUP85-207ENST00000578294 NPM2Q86SE8 214 aaKnown RBP17.08■□□□□ 0.32
NUP85-207ENST00000578294 BABAM1Q9NWV8 329 aa17.08■□□□□ 0.32
NUP85-207ENST00000578294 KCNQ3O43525 872 aa17.07■□□□□ 0.32
NUP85-207ENST00000578294 CANXP27824 592 aaKnown RBP17.07■□□□□ 0.32
NUP85-207ENST00000578294 IL6STP40189 918 aaPredicted RBP17.07■□□□□ 0.32
NUP85-207ENST00000578294 NARFQ9UHQ1 456 aa17.07■□□□□ 0.32
NUP85-207ENST00000578294 EIF5P55010 431 aaKnown RBP17.06■□□□□ 0.32
NUP85-207ENST00000578294 PARP3Q9Y6F1 533 aa17.06■□□□□ 0.32
NUP85-207ENST00000578294 CCDC146Q8IYE0 955 aa17.05■□□□□ 0.32
NUP85-207ENST00000578294 USPL1Q5W0Q7 1092 aa17.04■□□□□ 0.32
NUP85-207ENST00000578294 SRP68Q9UHB9 627 aaKnown RBP17.04■□□□□ 0.32
NUP85-207ENST00000578294 KDM3BQ7LBC6 1761 aa17.03■□□□□ 0.32
NUP85-207ENST00000578294 FKBP8Q14318 412 aa17.03■□□□□ 0.32
NUP85-207ENST00000578294 GPR162Q16538 588 aa17.03■□□□□ 0.32
NUP85-207ENST00000578294 NLGN2Q8NFZ4 835 aa17.03■□□□□ 0.32
NUP85-207ENST00000578294 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
NUP85-207ENST00000578294 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
NUP85-207ENST00000578294 MIS18AQ9NYP9 233 aa17.02■□□□□ 0.32
NUP85-207ENST00000578294 TSPYL4Q9UJ04 414 aa17.02■□□□□ 0.32
NUP85-207ENST00000578294 A1BGP04217 495 aa17.01■□□□□ 0.31
NUP85-207ENST00000578294 TM4SF1P30408 202 aa17.01■□□□□ 0.31
NUP85-207ENST00000578294 EIF4A1P60842 406 aaKnown RBP17.01■□□□□ 0.31
NUP85-207ENST00000578294 TGFB2P61812 414 aa17.01■□□□□ 0.31
NUP85-207ENST00000578294 NEUROD2Q15784 382 aa17.01■□□□□ 0.31
NUP85-207ENST00000578294 RRP7AQ9Y3A4 280 aaKnown RBP17.01■□□□□ 0.31
NUP85-207ENST00000578294 GRIN3BO60391 1043 aa17■□□□□ 0.31
NUP85-207ENST00000578294 GIGYF1O75420 1035 aaPredicted RBP17■□□□□ 0.31
NUP85-207ENST00000578294 C10orf71Q711Q0 1435 aa17■□□□□ 0.31
NUP85-207ENST00000578294 ZNF330Q9Y3S2 320 aaPredicted RBP17■□□□□ 0.31
NUP85-207ENST00000578294 RGL2O15211 777 aa16.99■□□□□ 0.31
NUP85-207ENST00000578294 CALD1Q05682 793 aaKnown RBP16.99■□□□□ 0.31
NUP85-207ENST00000578294 TRIM35Q9UPQ4 493 aa16.99■□□□□ 0.31
NUP85-207ENST00000578294 LAMB4A4D0S4 1761 aa16.98■□□□□ 0.31
NUP85-207ENST00000578294 PRAMEF22A3QJZ6 481 aa16.98■□□□□ 0.31
NUP85-207ENST00000578294 POLRMTO00411 1230 aaKnown RBP16.98■□□□□ 0.31
NUP85-207ENST00000578294 PELP1Q8IZL8 1130 aaKnown RBP16.98■□□□□ 0.31
NUP85-207ENST00000578294 MRS2Q9HD23 443 aa16.98■□□□□ 0.31
NUP85-207ENST00000578294 KIF13BQ9NQT8 1826 aa16.98■□□□□ 0.31
NUP85-207ENST00000578294 ERBB4Q15303 1308 aa16.97■□□□□ 0.31
NUP85-207ENST00000578294 DDR1Q08345 913 aa16.97■□□□□ 0.31
NUP85-207ENST00000578294 NFIXQ14938 502 aa16.97■□□□□ 0.31
NUP85-207ENST00000578294 DZIP3Q86Y13 1208 aaKnown RBP16.97■□□□□ 0.31
NUP85-207ENST00000578294 BCL2L12Q9HB09 334 aa16.97■□□□□ 0.31
NUP85-207ENST00000578294 TBC1D2BQ9UPU7 963 aa16.97■□□□□ 0.31
NUP85-207ENST00000578294 ZNF652Q9Y2D9 606 aa16.97■□□□□ 0.31
NUP85-207ENST00000578294 SCN7AQ01118 1682 aa16.97■□□□□ 0.31
NUP85-207ENST00000578294 CHL1O00533 1208 aa16.96■□□□□ 0.31
NUP85-207ENST00000578294 APAF1O14727 1248 aa16.96■□□□□ 0.31
NUP85-207ENST00000578294 CLEC4GQ6UXB4 293 aa16.96■□□□□ 0.31
NUP85-207ENST00000578294 CAMTA2O94983 1202 aa16.95■□□□□ 0.3
NUP85-207ENST00000578294 YY1P25490 414 aa16.95■□□□□ 0.3
NUP85-207ENST00000578294 PXDNLA1KZ92 1463 aa16.94■□□□□ 0.3
NUP85-207ENST00000578294 NBPF26B4DH59 902 aa16.94■□□□□ 0.3
NUP85-207ENST00000578294 SERPINB2P05120 415 aa16.94■□□□□ 0.3
NUP85-207ENST00000578294 CCDC184Q52MB2 194 aa16.94■□□□□ 0.3
NUP85-207ENST00000578294 NCBP3Q53F19 620 aaKnown RBP16.94■□□□□ 0.3
NUP85-207ENST00000578294 NBPF10Q6P3W6 841 aaKnown RBP16.94■□□□□ 0.3
NUP85-207ENST00000578294 NBPF15Q8N660 670 aa16.94■□□□□ 0.3
NUP85-207ENST00000578294 CFAP44Q96MT7 982 aa16.94■□□□□ 0.3
NUP85-207ENST00000578294 CARMIL3Q8ND23 1372 aa16.93■□□□□ 0.3
NUP85-207ENST00000578294 SETDB2Q96T68 719 aa16.93■□□□□ 0.3
NUP85-207ENST00000578294 HOXB7P09629 217 aa16.92■□□□□ 0.3
NUP85-207ENST00000578294 YBX3P16989 372 aaKnown RBP eCLIP16.92■□□□□ 0.3
NUP85-207ENST00000578294 PIP4K2AP48426 406 aaPredicted RBP16.92■□□□□ 0.3
NUP85-207ENST00000578294 TBC1D9BQ66K14 1250 aa16.92■□□□□ 0.3
NUP85-207ENST00000578294 IFT57Q9NWB7 429 aa16.92■□□□□ 0.3
NUP85-207ENST00000578294 PDZRN3Q9UPQ7 1066 aa16.92■□□□□ 0.3
NUP85-207ENST00000578294 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
NUP85-207ENST00000578294 BCORQ6W2J9 1755 aa16.92■□□□□ 0.3
NUP85-207ENST00000578294 NRXN2Q9P2S2 1712 aa16.91■□□□□ 0.3
NUP85-207ENST00000578294 GNAI1P63096 354 aa16.91■□□□□ 0.3
NUP85-207ENST00000578294 CCDC27Q2M243 656 aa16.91■□□□□ 0.3
NUP85-207ENST00000578294 KIF6Q6ZMV9 814 aa16.91■□□□□ 0.3
NUP85-207ENST00000578294 BICDL1Q6ZP65 573 aa16.91■□□□□ 0.3
NUP85-207ENST00000578294 A0A0G2JLW4 131 aa16.9■□□□□ 0.3
NUP85-207ENST00000578294 ERVV-1B6SEH8 477 aa16.9■□□□□ 0.3
NUP85-207ENST00000578294 DPEP1P16444 411 aa16.9■□□□□ 0.3
NUP85-207ENST00000578294 PIM2Q9P1W9 311 aa16.9■□□□□ 0.3
NUP85-207ENST00000578294 KIAA1551Q9HCM1 1747 aa16.9■□□□□ 0.3
NUP85-207ENST00000578294 ZNF853P0CG23 659 aa16.89■□□□□ 0.29
NUP85-207ENST00000578294 CHMP4AQ9BY43 222 aa16.89■□□□□ 0.29
NUP85-207ENST00000578294 NPHP1O15259 732 aa16.88■□□□□ 0.29
NUP85-207ENST00000578294 MYL6BP14649 208 aa16.88■□□□□ 0.29
NUP85-207ENST00000578294 EIF2S2P20042 333 aaKnown RBP16.88■□□□□ 0.29
NUP85-207ENST00000578294 AFDNP55196 1824 aaKnown RBP16.87■□□□□ 0.29
NUP85-207ENST00000578294 PDE6BP35913 854 aa16.87■□□□□ 0.29
NUP85-207ENST00000578294 ST5P78524 1137 aa16.87■□□□□ 0.29
NUP85-207ENST00000578294 DALRD3Q5D0E6 543 aaKnown RBP16.87■□□□□ 0.29
NUP85-207ENST00000578294 CNBD1Q8NA66 436 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms