RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 C4AP0C0L4 1744 aa15.29■□□□□ 0.04
GGA3-204ENST00000578208 COL15A1P39059 1388 aa15.29■□□□□ 0.04
GGA3-204ENST00000578208 SOS1Q07889 1333 aaPredicted RBP15.29■□□□□ 0.04
GGA3-204ENST00000578208 ZPR1O75312 459 aa15.29■□□□□ 0.04
GGA3-204ENST00000578208 ZBTB1Q9Y2K1 713 aa15.29■□□□□ 0.04
GGA3-204ENST00000578208 USP42Q9H9J4 1324 aaKnown RBP15.28■□□□□ 0.04
GGA3-204ENST00000578208 KCNQ3O43525 872 aa15.28■□□□□ 0.04
GGA3-204ENST00000578208 CANXP27824 592 aaKnown RBP15.28■□□□□ 0.04
GGA3-204ENST00000578208 TMPOP42166 694 aaKnown RBP15.28■□□□□ 0.04
GGA3-204ENST00000578208 ADAMTS8Q9UP79 889 aa15.28■□□□□ 0.04
GGA3-204ENST00000578208 A0A087WZG4 1122 aa15.27■□□□□ 0.04
GGA3-204ENST00000578208 MMP10P09238 476 aa15.27■□□□□ 0.04
GGA3-204ENST00000578208 SNRPA1P09661 255 aaKnown RBP15.27■□□□□ 0.04
GGA3-204ENST00000578208 GYS1P13807 737 aa15.27■□□□□ 0.04
GGA3-204ENST00000578208 NEUROD2Q15784 382 aa15.26■□□□□ 0.03
GGA3-204ENST00000578208 THUMPD2Q9BTF0 503 aaKnown RBP15.26■□□□□ 0.03
GGA3-204ENST00000578208 SRP68Q9UHB9 627 aaKnown RBP15.26■□□□□ 0.03
GGA3-204ENST00000578208 RRP7AQ9Y3A4 280 aaKnown RBP15.26■□□□□ 0.03
GGA3-204ENST00000578208 ZNF330Q9Y3S2 320 aaPredicted RBP15.26■□□□□ 0.03
GGA3-204ENST00000578208 CD2APQ9Y5K6 639 aa15.26■□□□□ 0.03
GGA3-204ENST00000578208 PARP3Q9Y6F1 533 aa15.26■□□□□ 0.03
GGA3-204ENST00000578208 MIS18AQ9NYP9 233 aa15.25■□□□□ 0.03
GGA3-204ENST00000578208 KDM3BQ7LBC6 1761 aa15.24■□□□□ 0.03
GGA3-204ENST00000578208 IL6STP40189 918 aaPredicted RBP15.24■□□□□ 0.03
GGA3-204ENST00000578208 PELP1Q8IZL8 1130 aaKnown RBP15.24■□□□□ 0.03
GGA3-204ENST00000578208 NLGN2Q8NFZ4 835 aa15.24■□□□□ 0.03
GGA3-204ENST00000578208 NARFQ9UHQ1 456 aa15.24■□□□□ 0.03
GGA3-204ENST00000578208 TSPYL4Q9UJ04 414 aa15.24■□□□□ 0.03
GGA3-204ENST00000578208 GPR162Q16538 588 aa15.23■□□□□ 0.03
GGA3-204ENST00000578208 USPL1Q5W0Q7 1092 aa15.23■□□□□ 0.03
GGA3-204ENST00000578208 MRS2Q9HD23 443 aa15.23■□□□□ 0.03
GGA3-204ENST00000578208 A1BGP04217 495 aa15.22■□□□□ 0.03
GGA3-204ENST00000578208 EIF5P55010 431 aaKnown RBP15.22■□□□□ 0.03
GGA3-204ENST00000578208 FKBP8Q14318 412 aa15.22■□□□□ 0.03
GGA3-204ENST00000578208 BABAM1Q9NWV8 329 aa15.22■□□□□ 0.03
GGA3-204ENST00000578208 USP16Q9Y5T5 823 aa15.22■□□□□ 0.03
GGA3-204ENST00000578208 LAMB4A4D0S4 1761 aa15.21■□□□□ 0.03
GGA3-204ENST00000578208 EIF4A1P60842 406 aaKnown RBP15.21■□□□□ 0.03
GGA3-204ENST00000578208 PRAMEF22A3QJZ6 481 aa15.2■□□□□ 0.02
GGA3-204ENST00000578208 SCN7AQ01118 1682 aa15.19■□□□□ 0.02
GGA3-204ENST00000578208 C10orf71Q711Q0 1435 aa15.19■□□□□ 0.02
GGA3-204ENST00000578208 APAF1O14727 1248 aa15.19■□□□□ 0.02
GGA3-204ENST00000578208 CALD1Q05682 793 aaKnown RBP15.19■□□□□ 0.02
GGA3-204ENST00000578208 LAS1LQ9Y4W2 734 aaKnown RBP15.19■□□□□ 0.02
GGA3-204ENST00000578208 GIGYF1O75420 1035 aaPredicted RBP15.18■□□□□ 0.02
GGA3-204ENST00000578208 PIP4K2AP48426 406 aaPredicted RBP15.18■□□□□ 0.02
GGA3-204ENST00000578208 CCDC184Q52MB2 194 aa15.18■□□□□ 0.02
GGA3-204ENST00000578208 DZIP3Q86Y13 1208 aaKnown RBP15.18■□□□□ 0.02
GGA3-204ENST00000578208 TRIM35Q9UPQ4 493 aa15.18■□□□□ 0.02
GGA3-204ENST00000578208 TBC1D2BQ9UPU7 963 aa15.18■□□□□ 0.02
GGA3-204ENST00000578208 TGFB2P61812 414 aa15.17■□□□□ 0.02
GGA3-204ENST00000578208 DDR1Q08345 913 aa15.17■□□□□ 0.02
GGA3-204ENST00000578208 ZNF652Q9Y2D9 606 aa15.17■□□□□ 0.02
GGA3-204ENST00000578208 POLRMTO00411 1230 aaKnown RBP15.16■□□□□ 0.02
GGA3-204ENST00000578208 GRIN3BO60391 1043 aa15.16■□□□□ 0.02
GGA3-204ENST00000578208 TM4SF1P30408 202 aa15.16■□□□□ 0.02
GGA3-204ENST00000578208 NFIXQ14938 502 aa15.16■□□□□ 0.02
GGA3-204ENST00000578208 BICDL1Q6ZP65 573 aa15.16■□□□□ 0.02
GGA3-204ENST00000578208 BCL2L12Q9HB09 334 aa15.16■□□□□ 0.02
GGA3-204ENST00000578208 YY1P25490 414 aa15.15■□□□□ 0.02
GGA3-204ENST00000578208 BCORQ6W2J9 1755 aa15.15■□□□□ 0.02
GGA3-204ENST00000578208 KIF13BQ9NQT8 1826 aa15.15■□□□□ 0.02
GGA3-204ENST00000578208 ERBB4Q15303 1308 aa15.15■□□□□ 0.02
GGA3-204ENST00000578208 PXDNLA1KZ92 1463 aa15.14■□□□□ 0.01
GGA3-204ENST00000578208 CARMIL3Q8ND23 1372 aa15.14■□□□□ 0.01
GGA3-204ENST00000578208 CHL1O00533 1208 aa15.14■□□□□ 0.01
GGA3-204ENST00000578208 NPHP1O15259 732 aa15.14■□□□□ 0.01
GGA3-204ENST00000578208 CAMTA2O94983 1202 aa15.14■□□□□ 0.01
GGA3-204ENST00000578208 SERPINB2P05120 415 aa15.14■□□□□ 0.01
GGA3-204ENST00000578208 NBPF26B4DH59 902 aa15.13■□□□□ 0.01
GGA3-204ENST00000578208 EIF2S2P20042 333 aaKnown RBP15.13■□□□□ 0.01
GGA3-204ENST00000578208 GNAI1P63096 354 aa15.13■□□□□ 0.01
GGA3-204ENST00000578208 TBC1D9BQ66K14 1250 aa15.13■□□□□ 0.01
GGA3-204ENST00000578208 NBPF10Q6P3W6 841 aaKnown RBP15.13■□□□□ 0.01
GGA3-204ENST00000578208 KIF6Q6ZMV9 814 aa15.13■□□□□ 0.01
GGA3-204ENST00000578208 NGEFQ8N5V2 710 aa15.13■□□□□ 0.01
GGA3-204ENST00000578208 NBPF15Q8N660 670 aa15.13■□□□□ 0.01
GGA3-204ENST00000578208 CFAP44Q96MT7 982 aa15.13■□□□□ 0.01
GGA3-204ENST00000578208 SETDB2Q96T68 719 aa15.13■□□□□ 0.01
GGA3-204ENST00000578208 MYL6BP14649 208 aa15.12■□□□□ 0.01
GGA3-204ENST00000578208 YBX3P16989 372 aaKnown RBP eCLIP15.12■□□□□ 0.01
GGA3-204ENST00000578208 CLEC4GQ6UXB4 293 aa15.12■□□□□ 0.01
GGA3-204ENST00000578208 IFT57Q9NWB7 429 aa15.12■□□□□ 0.01
GGA3-204ENST00000578208 WWC3Q9ULE0 1092 aa15.12■□□□□ 0.01
GGA3-204ENST00000578208 A0A0G2JLW4 131 aa15.11■□□□□ 0.01
GGA3-204ENST00000578208 RGL2O15211 777 aa15.11■□□□□ 0.01
GGA3-204ENST00000578208 DPEP1P16444 411 aa15.11■□□□□ 0.01
GGA3-204ENST00000578208 NRXN2Q9P2S2 1712 aa15.11■□□□□ 0.01
GGA3-204ENST00000578208 N4BP2Q86UW6 1770 aaPredicted RBP15.11■□□□□ 0.01
GGA3-204ENST00000578208 KIAA1551Q9HCM1 1747 aa15.1■□□□□ 0.01
GGA3-204ENST00000578208 HOXB7P09629 217 aa15.1■□□□□ 0.01
GGA3-204ENST00000578208 ST5P78524 1137 aa15.1■□□□□ 0.01
GGA3-204ENST00000578208 FAM9BQ8IZU0 186 aa15.1■□□□□ 0.01
GGA3-204ENST00000578208 BCS1LQ9Y276 419 aa15.1■□□□□ 0.01
GGA3-204ENST00000578208 AFDNP55196 1824 aaKnown RBP15.1■□□□□ 0.01
GGA3-204ENST00000578208 CNBD1Q8NA66 436 aa15.09■□□□□ 0.01
GGA3-204ENST00000578208 NECTIN2Q92692 538 aa15.09■□□□□ 0.01
GGA3-204ENST00000578208 MBIPQ9NS73 344 aa15.09■□□□□ 0.01
GGA3-204ENST00000578208 PIM2Q9P1W9 311 aa15.09■□□□□ 0.01
GGA3-204ENST00000578208 ERVV-1B6SEH8 477 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms