RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 TRIM66O15016 1216 aa5.84□□□□□ -1.47
PTPRM-206ENST00000578093 NEUROD2Q15784 382 aa5.84□□□□□ -1.47
PTPRM-206ENST00000578093 LARP1Q6PKG0 1096 aaKnown RBP5.84□□□□□ -1.47
PTPRM-206ENST00000578093 NGDNQ8NEJ9 315 aaKnown RBP5.84□□□□□ -1.47
PTPRM-206ENST00000578093 RBM46Q8TBY0 533 aaKnown RBP5.84□□□□□ -1.47
PTPRM-206ENST00000578093 VPS9D1Q9Y2B5 631 aa5.84□□□□□ -1.47
PTPRM-206ENST00000578093 PAPPAQ13219 1627 aa5.84□□□□□ -1.47
PTPRM-206ENST00000578093 TUBGCP6Q96RT7 1819 aa5.83□□□□□ -1.48
PTPRM-206ENST00000578093 NHSQ6T4R5 1651 aa5.83□□□□□ -1.48
PTPRM-206ENST00000578093 YY1P25490 414 aa5.83□□□□□ -1.48
PTPRM-206ENST00000578093 FAM196AQ6ZSG2 479 aa5.83□□□□□ -1.48
PTPRM-206ENST00000578093 PTF1AQ7RTS3 328 aa5.83□□□□□ -1.48
PTPRM-206ENST00000578093 TTC13Q8NBP0 860 aa5.83□□□□□ -1.48
PTPRM-206ENST00000578093 NUDT16Q96DE0 195 aaKnown RBP5.83□□□□□ -1.48
PTPRM-206ENST00000578093 ZBED2Q9BTP6 218 aa5.83□□□□□ -1.48
PTPRM-206ENST00000578093 SLC4A5Q9BY07 1137 aa5.83□□□□□ -1.48
PTPRM-206ENST00000578093 PRKD2Q9BZL6 878 aa5.83□□□□□ -1.48
PTPRM-206ENST00000578093 PDGFDQ9GZP0 370 aaPredicted RBP5.83□□□□□ -1.48
PTPRM-206ENST00000578093 CHD4Q14839 1912 aa5.83□□□□□ -1.48
PTPRM-206ENST00000578093 CEP350Q5VT06 3117 aa5.83□□□□□ -1.48
PTPRM-206ENST00000578093 OVOS2A0A0G2JMS6 1433 aa5.82□□□□□ -1.48
PTPRM-206ENST00000578093 OVOS2A0A0J9YW53 1432 aa5.82□□□□□ -1.48
PTPRM-206ENST00000578093 OVOS2Q6IE36 1432 aa5.82□□□□□ -1.48
PTPRM-206ENST00000578093 CPDO75976 1380 aa5.82□□□□□ -1.48
PTPRM-206ENST00000578093 NINLQ9Y2I6 1382 aa5.82□□□□□ -1.48
PTPRM-206ENST00000578093 ACEP12821 1306 aa5.82□□□□□ -1.48
PTPRM-206ENST00000578093 PDE4DQ08499 809 aa5.82□□□□□ -1.48
PTPRM-206ENST00000578093 DAXXQ9UER7 740 aaPredicted RBP5.82□□□□□ -1.48
PTPRM-206ENST00000578093 TSKSQ9UJT2 592 aa5.82□□□□□ -1.48
PTPRM-206ENST00000578093 PNMA3Q9UL41 463 aa5.82□□□□□ -1.48
PTPRM-206ENST00000578093 PDZRN3Q9UPQ7 1066 aa5.82□□□□□ -1.48
PTPRM-206ENST00000578093 ADGRG1Q9Y653 693 aa5.82□□□□□ -1.48
PTPRM-206ENST00000578093 CRB1P82279 1406 aa5.82□□□□□ -1.48
PTPRM-206ENST00000578093 PPIP5K1Q6PFW1 1433 aa5.82□□□□□ -1.48
PTPRM-206ENST00000578093 BTAF1O14981 1849 aa5.81□□□□□ -1.48
PTPRM-206ENST00000578093 LTN1O94822 1766 aa5.81□□□□□ -1.48
PTPRM-206ENST00000578093 BHMG1C9JSJ3 638 aaPredicted RBP5.81□□□□□ -1.48
PTPRM-206ENST00000578093 AMHR2Q16671 573 aa5.81□□□□□ -1.48
PTPRM-206ENST00000578093 PROX2Q3B8N5 592 aa5.81□□□□□ -1.48
PTPRM-206ENST00000578093 NUDT18Q6ZVK8 323 aa5.81□□□□□ -1.48
PTPRM-206ENST00000578093 METTL3Q86U44 580 aaKnown RBP5.81□□□□□ -1.48
PTPRM-206ENST00000578093 PXYLP1Q8TE99 480 aa5.81□□□□□ -1.48
PTPRM-206ENST00000578093 DCAF11Q8TEB1 546 aa5.81□□□□□ -1.48
PTPRM-206ENST00000578093 TATDN2Q93075 761 aa5.81□□□□□ -1.48
PTPRM-206ENST00000578093 WNT2BQ93097 391 aa5.81□□□□□ -1.48
PTPRM-206ENST00000578093 CDK19Q9BWU1 502 aa5.81□□□□□ -1.48
PTPRM-206ENST00000578093 MON2Q7Z3U7 1717 aa5.81□□□□□ -1.48
PTPRM-206ENST00000578093 TRPM1Q7Z4N2 1603 aa5.81□□□□□ -1.48
PTPRM-206ENST00000578093 NFAT5O94916 1531 aa5.8□□□□□ -1.48
PTPRM-206ENST00000578093 USP54Q70EL1 1684 aa5.8□□□□□ -1.48
PTPRM-206ENST00000578093 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.8□□□□□ -1.48
PTPRM-206ENST00000578093 KCNQ2O43526 872 aa5.8□□□□□ -1.48
PTPRM-206ENST00000578093 CLCN1P35523 988 aa5.8□□□□□ -1.48
PTPRM-206ENST00000578093 BRPF1P55201 1214 aaPredicted RBP5.8□□□□□ -1.48
PTPRM-206ENST00000578093 NFX1Q12986 1120 aaKnown RBP5.8□□□□□ -1.48
PTPRM-206ENST00000578093 PDE3BQ13370 1112 aa5.8□□□□□ -1.48
PTPRM-206ENST00000578093 TTLL12Q14166 644 aaPredicted RBP5.8□□□□□ -1.48
PTPRM-206ENST00000578093 NBPF8Q3BBV2 869 aa5.8□□□□□ -1.48
PTPRM-206ENST00000578093 LCE2CQ5TA81 110 aa5.8□□□□□ -1.48
PTPRM-206ENST00000578093 TCP11L2Q8N4U5 519 aa5.8□□□□□ -1.48
PTPRM-206ENST00000578093 NBPF3Q9H094 633 aa5.8□□□□□ -1.48
PTPRM-206ENST00000578093 KIAA1468Q9P260 1216 aa5.8□□□□□ -1.48
PTPRM-206ENST00000578093 RABGEF1Q9UJ41 708 aa5.8□□□□□ -1.48
PTPRM-206ENST00000578093 USP6P35125 1406 aa5.8□□□□□ -1.48
PTPRM-206ENST00000578093 CPSF1Q10570 1443 aaKnown RBP5.8□□□□□ -1.48
PTPRM-206ENST00000578093 COL24A1Q17RW2 1714 aa5.79□□□□□ -1.48
PTPRM-206ENST00000578093 QSER1Q2KHR3 1735 aa5.79□□□□□ -1.48
PTPRM-206ENST00000578093 ZBTB7CA1YPR0 619 aa5.79□□□□□ -1.48
PTPRM-206ENST00000578093 EVA1CP58658 441 aa5.79□□□□□ -1.48
PTPRM-206ENST00000578093 FAM161AQ3B820 660 aa5.79□□□□□ -1.48
PTPRM-206ENST00000578093 ABTB2Q8N961 1025 aa5.79□□□□□ -1.48
PTPRM-206ENST00000578093 PSMG3-AS1Q96PY0 264 aa5.79□□□□□ -1.48
PTPRM-206ENST00000578093 SPON1Q9HCB6 807 aa5.79□□□□□ -1.48
PTPRM-206ENST00000578093 PPP1R1BQ9UD71 204 aaPredicted RBP5.79□□□□□ -1.48
PTPRM-206ENST00000578093 FAM198AQ9UFP1 575 aa5.79□□□□□ -1.48
PTPRM-206ENST00000578093 SHANK3Q9BYB0 1731 aa5.79□□□□□ -1.48
PTPRM-206ENST00000578093 ABCC6O95255 1503 aa5.79□□□□□ -1.48
PTPRM-206ENST00000578093 PLEKHG3A1L390 1219 aa5.78□□□□□ -1.48
PTPRM-206ENST00000578093 ZBTB7AO95365 584 aa5.78□□□□□ -1.48
PTPRM-206ENST00000578093 GCP02774 474 aa5.78□□□□□ -1.48
PTPRM-206ENST00000578093 DNAJB2P25686 324 aa5.78□□□□□ -1.48
PTPRM-206ENST00000578093 KCNC4Q03721 635 aa5.78□□□□□ -1.48
PTPRM-206ENST00000578093 NBPF1Q3BBV0 1214 aa5.78□□□□□ -1.48
PTPRM-206ENST00000578093 NBPF14Q5TI25 921 aa5.78□□□□□ -1.48
PTPRM-206ENST00000578093 TNS2Q63HR2 1409 aa5.78□□□□□ -1.48
PTPRM-206ENST00000578093 DOT1LQ8TEK3 1739 aa5.78□□□□□ -1.48
PTPRM-206ENST00000578093 GPCPD1Q9NPB8 672 aa5.78□□□□□ -1.48
PTPRM-206ENST00000578093 THRAP3Q9Y2W1 955 aaKnown RBP5.78□□□□□ -1.48
PTPRM-206ENST00000578093 AATKQ6ZMQ8 1374 aa5.78□□□□□ -1.48
PTPRM-206ENST00000578093 BCL9O00512 1426 aa5.77□□□□□ -1.49
PTPRM-206ENST00000578093 SLC4A3P48751 1232 aa5.77□□□□□ -1.49
PTPRM-206ENST00000578093 MDM2Q00987 491 aaPredicted RBP5.77□□□□□ -1.49
PTPRM-206ENST00000578093 LAPTM4BQ86VI4 370 aa5.77□□□□□ -1.49
PTPRM-206ENST00000578093 MARCH10Q8NA82 808 aaPredicted RBP5.77□□□□□ -1.49
PTPRM-206ENST00000578093 EYA1Q99502 592 aa5.77□□□□□ -1.49
PTPRM-206ENST00000578093 V9GY48 417 aaPredicted RBP5.77□□□□□ -1.49
PTPRM-206ENST00000578093 RGPD2P0DJD1 1756 aa5.77□□□□□ -1.49
PTPRM-206ENST00000578093 WDR17Q8IZU2 1322 aa5.76□□□□□ -1.49
PTPRM-206ENST00000578093 RCCD1A6NED2 376 aa5.76□□□□□ -1.49
PTPRM-206ENST00000578093 SMAPO00193 183 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms