RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 MYH16Q9H6N6 1097 aa16.07■□□□□ 0.16
RARA-208ENST00000577646 CCDC87Q9NVE4 849 aa16.07■□□□□ 0.16
RARA-208ENST00000577646 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
RARA-208ENST00000577646 RTCBQ9Y3I0 505 aaKnown RBP16.07■□□□□ 0.16
RARA-208ENST00000577646 LAS1LQ9Y4W2 734 aaKnown RBP16.07■□□□□ 0.16
RARA-208ENST00000577646 ZNF521Q96K83 1311 aa16.07■□□□□ 0.16
RARA-208ENST00000577646 C4BP0C0L5 1744 aa16.06■□□□□ 0.16
RARA-208ENST00000577646 ERBB4Q15303 1308 aa16.06■□□□□ 0.16
RARA-208ENST00000577646 YY1P25490 414 aa16.06■□□□□ 0.16
RARA-208ENST00000577646 CRKLP46109 303 aaKnown RBP16.06■□□□□ 0.16
RARA-208ENST00000577646 COL5A3P25940 1745 aaPredicted RBP16.05■□□□□ 0.16
RARA-208ENST00000577646 QSER1Q2KHR3 1735 aa16.05■□□□□ 0.16
RARA-208ENST00000577646 DCAF8L1A6NGE4 600 aa16.05■□□□□ 0.16
RARA-208ENST00000577646 GOLGA2Q08379 1002 aa16.05■□□□□ 0.16
RARA-208ENST00000577646 MBIPQ9NS73 344 aa16.05■□□□□ 0.16
RARA-208ENST00000577646 TJP1Q07157 1748 aa16.05■□□□□ 0.16
RARA-208ENST00000577646 A0A087WZG4 1122 aa16.04■□□□□ 0.16
RARA-208ENST00000577646 IL6STP40189 918 aaPredicted RBP16.04■□□□□ 0.16
RARA-208ENST00000577646 TRAPPC3LQ5T215 181 aa16.04■□□□□ 0.16
RARA-208ENST00000577646 INTS5Q6P9B9 1019 aaKnown RBP16.04■□□□□ 0.16
RARA-208ENST00000577646 CASZ1Q86V15 1759 aa16.04■□□□□ 0.16
RARA-208ENST00000577646 E9PSI1 815 aa16.03■□□□□ 0.16
RARA-208ENST00000577646 GNPATO15228 680 aa16.03■□□□□ 0.16
RARA-208ENST00000577646 NPM2Q86SE8 214 aaKnown RBP16.03■□□□□ 0.16
RARA-208ENST00000577646 SALL2Q9Y467 1007 aaPredicted RBP16.03■□□□□ 0.16
RARA-208ENST00000577646 USP16Q9Y5T5 823 aa16.03■□□□□ 0.16
RARA-208ENST00000577646 RGL2O15211 777 aa16.02■□□□□ 0.16
RARA-208ENST00000577646 MSH5O43196 834 aa16.02■□□□□ 0.16
RARA-208ENST00000577646 PNPLA7Q6ZV29 1317 aa16.01■□□□□ 0.15
RARA-208ENST00000577646 PTGER2P43116 358 aa16.01■□□□□ 0.15
RARA-208ENST00000577646 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16■□□□□ 0.15
RARA-208ENST00000577646 POLD1P28340 1107 aa16■□□□□ 0.15
RARA-208ENST00000577646 EIF5P55010 431 aaKnown RBP16■□□□□ 0.15
RARA-208ENST00000577646 DUSP27Q5VZP5 1158 aa16■□□□□ 0.15
RARA-208ENST00000577646 UTRNP46939 3433 aa15.99■□□□□ 0.15
RARA-208ENST00000577646 RFC4P35249 363 aa15.99■□□□□ 0.15
RARA-208ENST00000577646 HNRNPUQ00839 825 aaKnown RBP eCLIP15.99■□□□□ 0.15
RARA-208ENST00000577646 COL23A1Q86Y22 540 aaPredicted RBP15.99■□□□□ 0.15
RARA-208ENST00000577646 ARXQ96QS3 562 aa15.99■□□□□ 0.15
RARA-208ENST00000577646 UBR3Q6ZT12 1888 aa15.99■□□□□ 0.15
RARA-208ENST00000577646 FANCIQ9NVI1 1328 aa15.98■□□□□ 0.15
RARA-208ENST00000577646 A1BGP04217 495 aa15.98■□□□□ 0.15
RARA-208ENST00000577646 SLFN5Q08AF3 891 aa15.98■□□□□ 0.15
RARA-208ENST00000577646 TRMT2AQ8IZ69 625 aaKnown RBP15.98■□□□□ 0.15
RARA-208ENST00000577646 ARHGEF1Q92888 912 aaKnown RBP15.98■□□□□ 0.15
RARA-208ENST00000577646 ZNF428Q96B54 188 aa15.98■□□□□ 0.15
RARA-208ENST00000577646 ZBTB1Q9Y2K1 713 aa15.98■□□□□ 0.15
RARA-208ENST00000577646 LAMB4A4D0S4 1761 aa15.98■□□□□ 0.15
RARA-208ENST00000577646 MYH14Q7Z406 1995 aaKnown RBP15.97■□□□□ 0.15
RARA-208ENST00000577646 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
RARA-208ENST00000577646 CANXP27824 592 aaKnown RBP15.97■□□□□ 0.15
RARA-208ENST00000577646 CCDC30Q5VVM6 783 aa15.97■□□□□ 0.15
RARA-208ENST00000577646 NLGN1Q8N2Q7 840 aa15.97■□□□□ 0.15
RARA-208ENST00000577646 DDX21Q9NR30 783 aaKnown RBP eCLIP15.97■□□□□ 0.15
RARA-208ENST00000577646 DBF4Q9UBU7 674 aaPredicted RBP15.97■□□□□ 0.15
RARA-208ENST00000577646 NARFQ9UHQ1 456 aa15.97■□□□□ 0.15
RARA-208ENST00000577646 ZBED9Q6R2W3 1325 aa15.96■□□□□ 0.15
RARA-208ENST00000577646 PRAMEF22A3QJZ6 481 aa15.96■□□□□ 0.15
RARA-208ENST00000577646 ZPR1O75312 459 aa15.96■□□□□ 0.15
RARA-208ENST00000577646 HDGFL1Q5TGJ6 251 aa15.96■□□□□ 0.15
RARA-208ENST00000577646 C8orf58Q8NAV2 365 aa15.96■□□□□ 0.15
RARA-208ENST00000577646 TSR2Q969E8 191 aaKnown RBP15.96■□□□□ 0.15
RARA-208ENST00000577646 COL15A1P39059 1388 aa15.96■□□□□ 0.15
RARA-208ENST00000577646 EIF2S2P20042 333 aaKnown RBP15.95■□□□□ 0.14
RARA-208ENST00000577646 TWISTNBQ3B726 338 aaPredicted RBP15.95■□□□□ 0.14
RARA-208ENST00000577646 SGIP1Q9BQI5 828 aa15.95■□□□□ 0.14
RARA-208ENST00000577646 FHDC1Q9C0D6 1143 aaPredicted RBP15.95■□□□□ 0.14
RARA-208ENST00000577646 HYPKQ9NX55 129 aa15.95■□□□□ 0.14
RARA-208ENST00000577646 SENP3-EIF4A1A0A087X0R7 540 aa15.94■□□□□ 0.14
RARA-208ENST00000577646 NBPF26B4DH59 902 aa15.94■□□□□ 0.14
RARA-208ENST00000577646 PHF14O94880 888 aa15.94■□□□□ 0.14
RARA-208ENST00000577646 NBPF10Q6P3W6 841 aaKnown RBP15.94■□□□□ 0.14
RARA-208ENST00000577646 CLEC4GQ6UXB4 293 aa15.94■□□□□ 0.14
RARA-208ENST00000577646 NBPF15Q8N660 670 aa15.94■□□□□ 0.14
RARA-208ENST00000577646 SPINK5Q9NQ38 1064 aaPredicted RBP15.94■□□□□ 0.14
RARA-208ENST00000577646 USP42Q9H9J4 1324 aaKnown RBP15.94■□□□□ 0.14
RARA-208ENST00000577646 ERVV-1B6SEH8 477 aa15.93■□□□□ 0.14
RARA-208ENST00000577646 EXOSC9Q06265 439 aaKnown RBP15.93■□□□□ 0.14
RARA-208ENST00000577646 PDIA6Q15084 440 aa15.93■□□□□ 0.14
RARA-208ENST00000577646 SYT17Q9BSW7 474 aa15.93■□□□□ 0.14
RARA-208ENST00000577646 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
RARA-208ENST00000577646 TUBGCP6Q96RT7 1819 aa15.92■□□□□ 0.14
RARA-208ENST00000577646 VAMP4O75379 141 aa15.92■□□□□ 0.14
RARA-208ENST00000577646 KRT24Q2M2I5 525 aa15.92■□□□□ 0.14
RARA-208ENST00000577646 AMIGO3Q86WK7 504 aa15.92■□□□□ 0.14
RARA-208ENST00000577646 KLHL34Q8N239 644 aa15.92■□□□□ 0.14
RARA-208ENST00000577646 ZNF652Q9Y2D9 606 aa15.92■□□□□ 0.14
RARA-208ENST00000577646 ELL2O00472 640 aaPredicted RBP15.91■□□□□ 0.14
RARA-208ENST00000577646 GYS1P13807 737 aa15.91■□□□□ 0.14
RARA-208ENST00000577646 KIF6Q6ZMV9 814 aa15.91■□□□□ 0.14
RARA-208ENST00000577646 DZIP3Q86Y13 1208 aaKnown RBP15.91■□□□□ 0.14
RARA-208ENST00000577646 LRP10Q7Z4F1 713 aa15.9■□□□□ 0.14
RARA-208ENST00000577646 TSPYL6Q8N831 410 aa15.9■□□□□ 0.14
RARA-208ENST00000577646 COL24A1Q17RW2 1714 aa15.9■□□□□ 0.14
RARA-208ENST00000577646 MYL6BP14649 208 aa15.89■□□□□ 0.13
RARA-208ENST00000577646 MSL1Q68DK7 614 aa15.89■□□□□ 0.13
RARA-208ENST00000577646 CDCA7LQ96GN5 454 aa15.89■□□□□ 0.13
RARA-208ENST00000577646 CHPF2Q9P2E5 772 aa15.89■□□□□ 0.13
RARA-208ENST00000577646 CAMTA2O94983 1202 aa15.88■□□□□ 0.13
RARA-208ENST00000577646 DDX58O95786 925 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms