RNA–Protein interactions for RNA: ENST00000577028.5

EDC4-213, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 4

Gene EDC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-213ENST00000577028 SOS1Q07889 1333 aaPredicted RBP23.08■■□□□ 1.29
EDC4-213ENST00000577028 USP42Q9H9J4 1324 aaKnown RBP23.08■■□□□ 1.29
EDC4-213ENST00000577028 KCNQ3O43525 872 aa23.08■■□□□ 1.29
EDC4-213ENST00000577028 STARD3NLO95772 234 aa23.08■■□□□ 1.29
EDC4-213ENST00000577028 YY1P25490 414 aa23.08■■□□□ 1.29
EDC4-213ENST00000577028 WDR43Q15061 677 aaKnown RBP eCLIP23.08■■□□□ 1.29
EDC4-213ENST00000577028 NFE2L2Q16236 605 aa23.08■■□□□ 1.29
EDC4-213ENST00000577028 PLEKHF1Q96S99 279 aa23.08■■□□□ 1.29
EDC4-213ENST00000577028 CD2APQ9Y5K6 639 aa23.08■■□□□ 1.29
EDC4-213ENST00000577028 HTATSF1O43719 755 aaKnown RBP23.07■■□□□ 1.28
EDC4-213ENST00000577028 ZPR1O75312 459 aa23.07■■□□□ 1.28
EDC4-213ENST00000577028 PRKRIP1Q9H875 184 aaPredicted RBP23.07■■□□□ 1.28
EDC4-213ENST00000577028 GOLGB1Q14789 3259 aaKnown RBP23.07■■□□□ 1.28
EDC4-213ENST00000577028 SCN7AQ01118 1682 aa23.06■■□□□ 1.28
EDC4-213ENST00000577028 WWC3Q9ULE0 1092 aa23.06■■□□□ 1.28
EDC4-213ENST00000577028 PARP3Q9Y6F1 533 aa23.05■■□□□ 1.28
EDC4-213ENST00000577028 AFDNP55196 1824 aaKnown RBP23.05■■□□□ 1.28
EDC4-213ENST00000577028 KIAA1551Q9HCM1 1747 aa23.05■■□□□ 1.28
EDC4-213ENST00000577028 USPL1Q5W0Q7 1092 aa23.04■■□□□ 1.28
EDC4-213ENST00000577028 CCDC146Q8IYE0 955 aa23.04■■□□□ 1.28
EDC4-213ENST00000577028 THUMPD2Q9BTF0 503 aaKnown RBP23.04■■□□□ 1.28
EDC4-213ENST00000577028 TEX13AQ9BXU3 409 aaPredicted RBP23.04■■□□□ 1.28
EDC4-213ENST00000577028 UTRNP46939 3433 aa23.04■■□□□ 1.28
EDC4-213ENST00000577028 FKBP8Q14318 412 aa23.03■■□□□ 1.28
EDC4-213ENST00000577028 BCORQ6W2J9 1755 aa23.02■■□□□ 1.28
EDC4-213ENST00000577028 TAF7Q15545 349 aaPredicted RBP23.02■■□□□ 1.28
EDC4-213ENST00000577028 MIS18AQ9NYP9 233 aa23.02■■□□□ 1.28
EDC4-213ENST00000577028 C10orf71Q711Q0 1435 aa23.01■■□□□ 1.27
EDC4-213ENST00000577028 ZNF316A6NFI3 1004 aaPredicted RBP23.01■■□□□ 1.27
EDC4-213ENST00000577028 NPM2Q86SE8 214 aaKnown RBP23.01■■□□□ 1.27
EDC4-213ENST00000577028 YBX3P16989 372 aaKnown RBP eCLIP23■■□□□ 1.27
EDC4-213ENST00000577028 PRAMEF22A3QJZ6 481 aa22.99■■□□□ 1.27
EDC4-213ENST00000577028 A1BGP04217 495 aa22.99■■□□□ 1.27
EDC4-213ENST00000577028 RIPK4P57078 832 aa22.99■■□□□ 1.27
EDC4-213ENST00000577028 NARFQ9UHQ1 456 aa22.99■■□□□ 1.27
EDC4-213ENST00000577028 RRP7AQ9Y3A4 280 aaKnown RBP22.99■■□□□ 1.27
EDC4-213ENST00000577028 BRCA1P38398 1863 aaKnown RBP22.98■■□□□ 1.27
EDC4-213ENST00000577028 SNRPA1P09661 255 aaKnown RBP22.98■■□□□ 1.27
EDC4-213ENST00000577028 PIP4K2AP48426 406 aaPredicted RBP22.98■■□□□ 1.27
EDC4-213ENST00000577028 NEUROD2Q15784 382 aa22.98■■□□□ 1.27
EDC4-213ENST00000577028 PXDNLA1KZ92 1463 aa22.98■■□□□ 1.27
EDC4-213ENST00000577028 A0A087WZG4 1122 aa22.97■■□□□ 1.27
EDC4-213ENST00000577028 DDR1Q08345 913 aa22.97■■□□□ 1.27
EDC4-213ENST00000577028 PNISRQ8TF01 805 aaKnown RBP22.97■■□□□ 1.27
EDC4-213ENST00000577028 USP16Q9Y5T5 823 aa22.97■■□□□ 1.27
EDC4-213ENST00000577028 EIF5P55010 431 aaKnown RBP22.96■■□□□ 1.27
EDC4-213ENST00000577028 IL6STP40189 918 aaPredicted RBP22.95■■□□□ 1.26
EDC4-213ENST00000577028 TMPOP42166 694 aaKnown RBP22.95■■□□□ 1.26
EDC4-213ENST00000577028 LMOD3Q0VAK6 560 aa22.95■■□□□ 1.26
EDC4-213ENST00000577028 BICDL1Q6ZP65 573 aa22.95■■□□□ 1.26
EDC4-213ENST00000577028 RUNDC1Q96C34 613 aa22.95■■□□□ 1.26
EDC4-213ENST00000577028 TBC1D2BQ9UPU7 963 aa22.95■■□□□ 1.26
EDC4-213ENST00000577028 NRXN2Q9P2S2 1712 aa22.94■■□□□ 1.26
EDC4-213ENST00000577028 GRIN3BO60391 1043 aa22.94■■□□□ 1.26
EDC4-213ENST00000577028 ADAMTS8Q9UP79 889 aa22.94■■□□□ 1.26
EDC4-213ENST00000577028 POLRMTO00411 1230 aaKnown RBP22.93■■□□□ 1.26
EDC4-213ENST00000577028 A0A0G2JLW4 131 aa22.92■■□□□ 1.26
EDC4-213ENST00000577028 NFIXQ14938 502 aa22.92■■□□□ 1.26
EDC4-213ENST00000577028 BCL2L12Q9HB09 334 aa22.92■■□□□ 1.26
EDC4-213ENST00000577028 TSPYL4Q9UJ04 414 aa22.92■■□□□ 1.26
EDC4-213ENST00000577028 DZIP3Q86Y13 1208 aaKnown RBP22.91■■□□□ 1.26
EDC4-213ENST00000577028 ARFGEF1Q9Y6D6 1849 aa22.91■■□□□ 1.26
EDC4-213ENST00000577028 TM4SF1P30408 202 aa22.9■■□□□ 1.26
EDC4-213ENST00000577028 TGFB2P61812 414 aa22.9■■□□□ 1.26
EDC4-213ENST00000577028 DLEC1Q9Y238 1755 aa22.9■■□□□ 1.26
EDC4-213ENST00000577028 DPEP1P16444 411 aa22.89■■□□□ 1.25
EDC4-213ENST00000577028 CACNA1SQ13698 1873 aa22.88■■□□□ 1.25
EDC4-213ENST00000577028 ANKRD31Q8N7Z5 1873 aa22.88■■□□□ 1.25
EDC4-213ENST00000577028 EIF4A1P60842 406 aaKnown RBP22.88■■□□□ 1.25
EDC4-213ENST00000577028 TBC1D9BQ66K14 1250 aa22.88■■□□□ 1.25
EDC4-213ENST00000577028 BCS1LQ9Y276 419 aa22.88■■□□□ 1.25
EDC4-213ENST00000577028 LAS1LQ9Y4W2 734 aaKnown RBP22.88■■□□□ 1.25
EDC4-213ENST00000577028 ANP32CO43423 234 aa22.87■■□□□ 1.25
EDC4-213ENST00000577028 SERPINB2P05120 415 aa22.87■■□□□ 1.25
EDC4-213ENST00000577028 NUP98P52948 1817 aa22.87■■□□□ 1.25
EDC4-213ENST00000577028 NPHP1O15259 732 aa22.86■■□□□ 1.25
EDC4-213ENST00000577028 CAMTA2O94983 1202 aa22.86■■□□□ 1.25
EDC4-213ENST00000577028 NBPF26B4DH59 902 aa22.85■■□□□ 1.25
EDC4-213ENST00000577028 GIGYF1O75420 1035 aaPredicted RBP22.85■■□□□ 1.25
EDC4-213ENST00000577028 CHRNA5P30532 468 aa22.85■■□□□ 1.25
EDC4-213ENST00000577028 NBPF10Q6P3W6 841 aaKnown RBP22.85■■□□□ 1.25
EDC4-213ENST00000577028 NGEFQ8N5V2 710 aa22.85■■□□□ 1.25
EDC4-213ENST00000577028 NBPF15Q8N660 670 aa22.85■■□□□ 1.25
EDC4-213ENST00000577028 CARMIL3Q8ND23 1372 aa22.85■■□□□ 1.25
EDC4-213ENST00000577028 CCDC184Q52MB2 194 aa22.84■■□□□ 1.25
EDC4-213ENST00000577028 COL11A2P13942 1736 aaPredicted RBP22.84■■□□□ 1.25
EDC4-213ENST00000577028 MYL6BP14649 208 aa22.83■■□□□ 1.25
EDC4-213ENST00000577028 TRIM35Q9UPQ4 493 aa22.83■■□□□ 1.25
EDC4-213ENST00000577028 ZNF652Q9Y2D9 606 aa22.83■■□□□ 1.25
EDC4-213ENST00000577028 ZNF784Q8NCA9 323 aaPredicted RBP22.82■■□□□ 1.24
EDC4-213ENST00000577028 SETDB2Q96T68 719 aa22.82■■□□□ 1.24
EDC4-213ENST00000577028 APAF1O14727 1248 aa22.81■■□□□ 1.24
EDC4-213ENST00000577028 CCDC24Q8N4L8 307 aa22.81■■□□□ 1.24
EDC4-213ENST00000577028 MRS2Q9HD23 443 aa22.81■■□□□ 1.24
EDC4-213ENST00000577028 PIM2Q9P1W9 311 aa22.81■■□□□ 1.24
EDC4-213ENST00000577028 EIF2S2P20042 333 aaKnown RBP22.8■■□□□ 1.24
EDC4-213ENST00000577028 CNBD1Q8NA66 436 aa22.79■■□□□ 1.24
EDC4-213ENST00000577028 BABAM1Q9NWV8 329 aa22.79■■□□□ 1.24
EDC4-213ENST00000577028 SENP3-EIF4A1A0A087X0R7 540 aa22.78■■□□□ 1.24
EDC4-213ENST00000577028 KCNA3P22001 575 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms