RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 USP3Q9Y6I4 520 aa7.64□□□□□ -1.19
TSR1-203ENST00000575049 SLC35F4A4IF30 521 aa7.63□□□□□ -1.19
TSR1-203ENST00000575049 CDK2AP1O14519 115 aa7.63□□□□□ -1.19
TSR1-203ENST00000575049 FOXK2Q01167 660 aa7.63□□□□□ -1.19
TSR1-203ENST00000575049 ELOAQ14241 798 aaKnown RBP7.63□□□□□ -1.19
TSR1-203ENST00000575049 C4orf17Q53FE4 359 aa7.63□□□□□ -1.19
TSR1-203ENST00000575049 WDR44Q5JSH3 913 aa7.63□□□□□ -1.19
TSR1-203ENST00000575049 FAM200AQ8TCP9 573 aa7.63□□□□□ -1.19
TSR1-203ENST00000575049 BRD1O95696 1058 aa7.62□□□□□ -1.19
TSR1-203ENST00000575049 PHKA2P46019 1235 aa7.62□□□□□ -1.19
TSR1-203ENST00000575049 ZNF295-AS1Q8N0V1 137 aa7.62□□□□□ -1.19
TSR1-203ENST00000575049 CCDC155Q8N6L0 562 aa7.62□□□□□ -1.19
TSR1-203ENST00000575049 ZNF775Q96BV0 537 aaPredicted RBP7.62□□□□□ -1.19
TSR1-203ENST00000575049 ZMIZ1Q9ULJ6 1067 aa7.62□□□□□ -1.19
TSR1-203ENST00000575049 TERTO14746 1132 aaKnown RBP7.61□□□□□ -1.19
TSR1-203ENST00000575049 PPFIA3O75145 1194 aa7.61□□□□□ -1.19
TSR1-203ENST00000575049 SLC9A9Q8IVB4 645 aa7.61□□□□□ -1.19
TSR1-203ENST00000575049 NIFKQ9BYG3 293 aaKnown RBP7.61□□□□□ -1.19
TSR1-203ENST00000575049 TSPAN10Q9H1Z9 355 aaPredicted RBP7.61□□□□□ -1.19
TSR1-203ENST00000575049 TIMMDC1Q9NPL8 285 aa7.61□□□□□ -1.19
TSR1-203ENST00000575049 PLA2G4AP47712 749 aa7.6□□□□□ -1.19
TSR1-203ENST00000575049 VEGFBP49765 207 aa7.6□□□□□ -1.19
TSR1-203ENST00000575049 NPAS3Q8IXF0 933 aa7.6□□□□□ -1.19
TSR1-203ENST00000575049 STK32AQ8WU08 396 aa7.6□□□□□ -1.19
TSR1-203ENST00000575049 HINFPQ9BQA5 517 aa7.6□□□□□ -1.19
TSR1-203ENST00000575049 CABP1Q9NZU7 370 aa7.6□□□□□ -1.19
TSR1-203ENST00000575049 DYRK1BQ9Y463 629 aa7.6□□□□□ -1.19
TSR1-203ENST00000575049 H3BM21 787 aa7.59□□□□□ -1.19
TSR1-203ENST00000575049 CCDC27Q2M243 656 aa7.59□□□□□ -1.19
TSR1-203ENST00000575049 TBCELQ5QJ74 424 aa7.59□□□□□ -1.19
TSR1-203ENST00000575049 A0A1B0GTH6 734 aa7.58□□□□□ -1.2
TSR1-203ENST00000575049 LGR5O75473 907 aa7.58□□□□□ -1.2
TSR1-203ENST00000575049 ITGA6P23229 1130 aa7.58□□□□□ -1.2
TSR1-203ENST00000575049 ZDHHC1Q8WTX9 485 aa7.58□□□□□ -1.2
TSR1-203ENST00000575049 GAS2L1Q99501 681 aaPredicted RBP7.58□□□□□ -1.2
TSR1-203ENST00000575049 C21orf2O43822 256 aa7.57□□□□□ -1.2
TSR1-203ENST00000575049 PSMA6P60900 246 aaKnown RBP7.57□□□□□ -1.2
TSR1-203ENST00000575049 FAM69CQ0P6D2 419 aa7.57□□□□□ -1.2
TSR1-203ENST00000575049 NFX1Q12986 1120 aaKnown RBP7.57□□□□□ -1.2
TSR1-203ENST00000575049 TEAD4Q15561 434 aa7.57□□□□□ -1.2
TSR1-203ENST00000575049 TMEM164Q5U3C3 297 aa7.57□□□□□ -1.2
TSR1-203ENST00000575049 SLC16A10Q8TF71 515 aa7.57□□□□□ -1.2
TSR1-203ENST00000575049 SCG3Q8WXD2 468 aaKnown RBP7.57□□□□□ -1.2
TSR1-203ENST00000575049 ATAD2Q6PL18 1390 aa7.57□□□□□ -1.2
TSR1-203ENST00000575049 PPP1R12BO60237 982 aaPredicted RBP7.56□□□□□ -1.2
TSR1-203ENST00000575049 F11P03951 625 aa7.56□□□□□ -1.2
TSR1-203ENST00000575049 MSX1P28360 303 aa7.56□□□□□ -1.2
TSR1-203ENST00000575049 NOS2P35228 1153 aa7.56□□□□□ -1.2
TSR1-203ENST00000575049 SWI5Q1ZZU3 235 aa7.56□□□□□ -1.2
TSR1-203ENST00000575049 RIPOR1Q6ZS17 1223 aa7.56□□□□□ -1.2
TSR1-203ENST00000575049 GAS2L2Q8NHY3 880 aa7.56□□□□□ -1.2
TSR1-203ENST00000575049 L3MBTL2Q969R5 705 aa7.56□□□□□ -1.2
TSR1-203ENST00000575049 AIDAQ96BJ3 306 aa7.56□□□□□ -1.2
TSR1-203ENST00000575049 CUEDC1Q9NWM3 386 aaPredicted RBP7.56□□□□□ -1.2
TSR1-203ENST00000575049 USTQ9Y2C2 406 aa7.56□□□□□ -1.2
TSR1-203ENST00000575049 PARP3Q9Y6F1 533 aa7.56□□□□□ -1.2
TSR1-203ENST00000575049 SERTM1A2A2V5 107 aa7.55□□□□□ -1.2
TSR1-203ENST00000575049 UNCXA6NJT0 531 aa7.55□□□□□ -1.2
TSR1-203ENST00000575049 EML1O00423 815 aa7.55□□□□□ -1.2
TSR1-203ENST00000575049 WFS1O76024 890 aa7.55□□□□□ -1.2
TSR1-203ENST00000575049 IGFBP4P22692 258 aa7.55□□□□□ -1.2
TSR1-203ENST00000575049 NBPF1Q3BBV0 1214 aa7.55□□□□□ -1.2
TSR1-203ENST00000575049 GPAMQ9HCL2 828 aa7.55□□□□□ -1.2
TSR1-203ENST00000575049 ZDHHC3Q9NYG2 299 aa7.55□□□□□ -1.2
TSR1-203ENST00000575049 ZNF232Q9UNY5 417 aa7.55□□□□□ -1.2
TSR1-203ENST00000575049 CHMP3Q9Y3E7 222 aa7.55□□□□□ -1.2
TSR1-203ENST00000575049 ATP4AP20648 1035 aa7.54□□□□□ -1.2
TSR1-203ENST00000575049 WEE1P30291 646 aa7.54□□□□□ -1.2
TSR1-203ENST00000575049 TXLNAP40222 546 aa7.54□□□□□ -1.2
TSR1-203ENST00000575049 SH3PXD2AQ5TCZ1 1133 aa7.54□□□□□ -1.2
TSR1-203ENST00000575049 POTEAQ6S8J7 498 aa7.54□□□□□ -1.2
TSR1-203ENST00000575049 TREML4Q6UXN2 200 aa7.54□□□□□ -1.2
TSR1-203ENST00000575049 SND1Q7KZF4 910 aaKnown RBP eCLIP7.54□□□□□ -1.2
TSR1-203ENST00000575049 FAM177A1Q8N128 213 aaPredicted RBP7.54□□□□□ -1.2
TSR1-203ENST00000575049 C1orf216Q8TAB5 229 aa7.54□□□□□ -1.2
TSR1-203ENST00000575049 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
TSR1-203ENST00000575049 IGSF5Q9NSI5 407 aa7.54□□□□□ -1.2
TSR1-203ENST00000575049 IVNS1ABPQ9Y6Y0 642 aa7.54□□□□□ -1.2
TSR1-203ENST00000575049 ERBB4Q15303 1308 aa7.53□□□□□ -1.2
TSR1-203ENST00000575049 CDC14CA4D256 554 aa7.53□□□□□ -1.2
TSR1-203ENST00000575049 CSB-PGBD3P0DP91 1061 aa7.53□□□□□ -1.2
TSR1-203ENST00000575049 VSIG8P0DPA2 414 aa7.53□□□□□ -1.2
TSR1-203ENST00000575049 HIRAP54198 1017 aaPredicted RBP7.53□□□□□ -1.2
TSR1-203ENST00000575049 DBN1Q16643 649 aa7.53□□□□□ -1.2
TSR1-203ENST00000575049 TRIM22Q8IYM9 498 aa7.53□□□□□ -1.2
TSR1-203ENST00000575049 VWA5B2Q8N398 1253 aa7.53□□□□□ -1.2
TSR1-203ENST00000575049 STAG2Q8N3U4 1231 aa7.53□□□□□ -1.2
TSR1-203ENST00000575049 CHMP7Q8WUX9 453 aaPredicted RBP7.53□□□□□ -1.2
TSR1-203ENST00000575049 IRF7Q92985 503 aa7.53□□□□□ -1.2
TSR1-203ENST00000575049 ZNF837Q96EG3 531 aaPredicted RBP7.53□□□□□ -1.2
TSR1-203ENST00000575049 C2orf49Q9BVC5 232 aaPredicted RBP7.53□□□□□ -1.2
TSR1-203ENST00000575049 CHMP4AQ9BY43 222 aa7.53□□□□□ -1.2
TSR1-203ENST00000575049 RUBCNLQ9H714 662 aa7.53□□□□□ -1.2
TSR1-203ENST00000575049 H7C1W4 665 aa7.52□□□□□ -1.21
TSR1-203ENST00000575049 TATP17735 454 aaPredicted RBP7.52□□□□□ -1.21
TSR1-203ENST00000575049 LCE2CQ5TA81 110 aa7.52□□□□□ -1.21
TSR1-203ENST00000575049 PGBD3Q8N328 593 aa7.52□□□□□ -1.21
TSR1-203ENST00000575049 CLP1Q92989 425 aaKnown RBP7.52□□□□□ -1.21
TSR1-203ENST00000575049 GMCL1Q96IK5 515 aa7.52□□□□□ -1.21
TSR1-203ENST00000575049 PRIMPOLQ96LW4 560 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms