RNA–Protein interactions for RNA: ENST00000573990.1

SPNS2-207, Transcript of sphingolipid transporter 2, humanhuman

TSL 3

Gene SPNS2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-207ENST00000573990 FMNL2Q96PY5 1086 aa25.78■■□□□ 1.72
SPNS2-207ENST00000573990 YY1P25490 414 aa25.77■■□□□ 1.72
SPNS2-207ENST00000573990 FKBP8Q14318 412 aa25.77■■□□□ 1.72
SPNS2-207ENST00000573990 NFE2L2Q16236 605 aa25.77■■□□□ 1.72
SPNS2-207ENST00000573990 MIS18AQ9NYP9 233 aa25.77■■□□□ 1.72
SPNS2-207ENST00000573990 USP42Q9H9J4 1324 aaKnown RBP25.77■■□□□ 1.72
SPNS2-207ENST00000573990 THUMPD2Q9BTF0 503 aaKnown RBP25.76■■□□□ 1.71
SPNS2-207ENST00000573990 DLG5Q8TDM6 1919 aa25.76■■□□□ 1.71
SPNS2-207ENST00000573990 MAPK8IP3Q9UPT6 1336 aa25.75■■□□□ 1.71
SPNS2-207ENST00000573990 PRAMEF22A3QJZ6 481 aa25.75■■□□□ 1.71
SPNS2-207ENST00000573990 STARD3NLO95772 234 aa25.75■■□□□ 1.71
SPNS2-207ENST00000573990 USPL1Q5W0Q7 1092 aa25.75■■□□□ 1.71
SPNS2-207ENST00000573990 YBX3P16989 372 aaKnown RBP eCLIP25.74■■□□□ 1.71
SPNS2-207ENST00000573990 TAF7Q15545 349 aaPredicted RBP25.74■■□□□ 1.71
SPNS2-207ENST00000573990 MRS2Q9HD23 443 aa25.74■■□□□ 1.71
SPNS2-207ENST00000573990 WWC3Q9ULE0 1092 aa25.74■■□□□ 1.71
SPNS2-207ENST00000573990 A1BGP04217 495 aa25.73■■□□□ 1.71
SPNS2-207ENST00000573990 USP16Q9Y5T5 823 aa25.73■■□□□ 1.71
SPNS2-207ENST00000573990 COL15A1P39059 1388 aa25.72■■□□□ 1.71
SPNS2-207ENST00000573990 ZPR1O75312 459 aa25.72■■□□□ 1.71
SPNS2-207ENST00000573990 CCDC146Q8IYE0 955 aa25.72■■□□□ 1.71
SPNS2-207ENST00000573990 TEX13AQ9BXU3 409 aaPredicted RBP25.72■■□□□ 1.71
SPNS2-207ENST00000573990 PARP3Q9Y6F1 533 aa25.72■■□□□ 1.71
SPNS2-207ENST00000573990 CCER2I3L3R5 266 aa25.7■■□□□ 1.7
SPNS2-207ENST00000573990 EIF5P55010 431 aaKnown RBP25.7■■□□□ 1.7
SPNS2-207ENST00000573990 DDR1Q08345 913 aa25.7■■□□□ 1.7
SPNS2-207ENST00000573990 BCL2L12Q9HB09 334 aa25.7■■□□□ 1.7
SPNS2-207ENST00000573990 NARFQ9UHQ1 456 aa25.7■■□□□ 1.7
SPNS2-207ENST00000573990 PIP4K2AP48426 406 aaPredicted RBP25.69■■□□□ 1.7
SPNS2-207ENST00000573990 ZNF330Q9Y3S2 320 aaPredicted RBP25.69■■□□□ 1.7
SPNS2-207ENST00000573990 TM4SF1P30408 202 aa25.68■■□□□ 1.7
SPNS2-207ENST00000573990 RIPK4P57078 832 aa25.68■■□□□ 1.7
SPNS2-207ENST00000573990 ADAMTS8Q9UP79 889 aa25.68■■□□□ 1.7
SPNS2-207ENST00000573990 RRP7AQ9Y3A4 280 aaKnown RBP25.68■■□□□ 1.7
SPNS2-207ENST00000573990 SNRPA1P09661 255 aaKnown RBP25.66■■□□□ 1.7
SPNS2-207ENST00000573990 TMPOP42166 694 aaKnown RBP25.66■■□□□ 1.7
SPNS2-207ENST00000573990 TBC1D2BQ9UPU7 963 aa25.66■■□□□ 1.7
SPNS2-207ENST00000573990 A0A0G2JLW4 131 aa25.65■■□□□ 1.7
SPNS2-207ENST00000573990 C10orf71Q711Q0 1435 aa25.64■■□□□ 1.7
SPNS2-207ENST00000573990 POLRMTO00411 1230 aaKnown RBP25.64■■□□□ 1.7
SPNS2-207ENST00000573990 NFIXQ14938 502 aa25.64■■□□□ 1.7
SPNS2-207ENST00000573990 NEUROD2Q15784 382 aa25.64■■□□□ 1.7
SPNS2-207ENST00000573990 PNISRQ8TF01 805 aaKnown RBP25.64■■□□□ 1.7
SPNS2-207ENST00000573990 A0A087WZG4 1122 aa25.63■■□□□ 1.69
SPNS2-207ENST00000573990 IL6STP40189 918 aaPredicted RBP25.63■■□□□ 1.69
SPNS2-207ENST00000573990 CCDC184Q52MB2 194 aa25.63■■□□□ 1.69
SPNS2-207ENST00000573990 PXDNLA1KZ92 1463 aa25.62■■□□□ 1.69
SPNS2-207ENST00000573990 RUNDC1Q96C34 613 aa25.62■■□□□ 1.69
SPNS2-207ENST00000573990 KIF13BQ9NQT8 1826 aa25.62■■□□□ 1.69
SPNS2-207ENST00000573990 N4BP2Q86UW6 1770 aaPredicted RBP25.61■■□□□ 1.69
SPNS2-207ENST00000573990 KIAA1551Q9HCM1 1747 aa25.61■■□□□ 1.69
SPNS2-207ENST00000573990 GRIN3BO60391 1043 aa25.61■■□□□ 1.69
SPNS2-207ENST00000573990 DPEP1P16444 411 aa25.61■■□□□ 1.69
SPNS2-207ENST00000573990 TGFB2P61812 414 aa25.61■■□□□ 1.69
SPNS2-207ENST00000573990 BICDL1Q6ZP65 573 aa25.61■■□□□ 1.69
SPNS2-207ENST00000573990 NBPF26B4DH59 902 aa25.6■■□□□ 1.69
SPNS2-207ENST00000573990 EIF4A1P60842 406 aaKnown RBP25.6■■□□□ 1.69
SPNS2-207ENST00000573990 NBPF10Q6P3W6 841 aaKnown RBP25.6■■□□□ 1.69
SPNS2-207ENST00000573990 NBPF15Q8N660 670 aa25.6■■□□□ 1.69
SPNS2-207ENST00000573990 KDM3BQ7LBC6 1761 aa25.59■■□□□ 1.69
SPNS2-207ENST00000573990 CHD4Q14839 1912 aa25.59■■□□□ 1.69
SPNS2-207ENST00000573990 TBC1D9BQ66K14 1250 aa25.58■■□□□ 1.69
SPNS2-207ENST00000573990 GIGYF1O75420 1035 aaPredicted RBP25.57■■□□□ 1.68
SPNS2-207ENST00000573990 SERPINB2P05120 415 aa25.57■■□□□ 1.68
SPNS2-207ENST00000573990 CAMTA2O94983 1202 aa25.56■■□□□ 1.68
SPNS2-207ENST00000573990 KCNA3P22001 575 aa25.56■■□□□ 1.68
SPNS2-207ENST00000573990 NPM2Q86SE8 214 aaKnown RBP25.56■■□□□ 1.68
SPNS2-207ENST00000573990 DZIP3Q86Y13 1208 aaKnown RBP25.56■■□□□ 1.68
SPNS2-207ENST00000573990 TSPYL4Q9UJ04 414 aa25.56■■□□□ 1.68
SPNS2-207ENST00000573990 TRIM35Q9UPQ4 493 aa25.56■■□□□ 1.68
SPNS2-207ENST00000573990 UTRNP46939 3433 aa25.56■■□□□ 1.68
SPNS2-207ENST00000573990 CHRNA5P30532 468 aa25.55■■□□□ 1.68
SPNS2-207ENST00000573990 MIER1Q8N108 512 aa25.55■■□□□ 1.68
SPNS2-207ENST00000573990 AFDNP55196 1824 aaKnown RBP25.54■■□□□ 1.68
SPNS2-207ENST00000573990 LMOD3Q0VAK6 560 aa25.54■■□□□ 1.68
SPNS2-207ENST00000573990 BCS1LQ9Y276 419 aa25.54■■□□□ 1.68
SPNS2-207ENST00000573990 ZNF784Q8NCA9 323 aaPredicted RBP25.53■■□□□ 1.68
SPNS2-207ENST00000573990 SCN7AQ01118 1682 aa25.52■■□□□ 1.68
SPNS2-207ENST00000573990 NGEFQ8N5V2 710 aa25.52■■□□□ 1.68
SPNS2-207ENST00000573990 GOLGB1Q14789 3259 aaKnown RBP25.52■■□□□ 1.68
SPNS2-207ENST00000573990 CCDC24Q8N4L8 307 aa25.51■■□□□ 1.67
SPNS2-207ENST00000573990 CARMIL3Q8ND23 1372 aa25.5■■□□□ 1.67
SPNS2-207ENST00000573990 NRXN2Q9P2S2 1712 aa25.5■■□□□ 1.67
SPNS2-207ENST00000573990 LAS1LQ9Y4W2 734 aaKnown RBP25.5■■□□□ 1.67
SPNS2-207ENST00000573990 LAMB4A4D0S4 1761 aa25.49■■□□□ 1.67
SPNS2-207ENST00000573990 APAF1O14727 1248 aa25.49■■□□□ 1.67
SPNS2-207ENST00000573990 NCBP3Q53F19 620 aaKnown RBP25.49■■□□□ 1.67
SPNS2-207ENST00000573990 FAM9BQ8IZU0 186 aa25.49■■□□□ 1.67
SPNS2-207ENST00000573990 PIM2Q9P1W9 311 aa25.48■■□□□ 1.67
SPNS2-207ENST00000573990 MYL6BP14649 208 aa25.47■■□□□ 1.67
SPNS2-207ENST00000573990 SETDB2Q96T68 719 aa25.47■■□□□ 1.67
SPNS2-207ENST00000573990 BCORQ6W2J9 1755 aa25.46■■□□□ 1.67
SPNS2-207ENST00000573990 SENP3-EIF4A1A0A087X0R7 540 aa25.46■■□□□ 1.67
SPNS2-207ENST00000573990 CHL1O00533 1208 aa25.46■■□□□ 1.67
SPNS2-207ENST00000573990 HLFQ16534 295 aa25.46■■□□□ 1.67
SPNS2-207ENST00000573990 KRT24Q2M2I5 525 aa25.46■■□□□ 1.67
SPNS2-207ENST00000573990 BABAM1Q9NWV8 329 aa25.46■■□□□ 1.67
SPNS2-207ENST00000573990 BRCA1P38398 1863 aaKnown RBP25.45■■□□□ 1.67
SPNS2-207ENST00000573990 EIF2S2P20042 333 aaKnown RBP25.45■■□□□ 1.66
SPNS2-207ENST00000573990 PRR5LQ6MZQ0 368 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms