RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 UBR3Q6ZT12 1888 aa8.36□□□□□ -1.07
CACNA1A-203ENST00000573891 MAP2P11137 1827 aaKnown RBP8.36□□□□□ -1.07
CACNA1A-203ENST00000573891 PLEKHG2Q9H7P9 1386 aa8.35□□□□□ -1.07
CACNA1A-203ENST00000573891 GNPATO15228 680 aa8.35□□□□□ -1.07
CACNA1A-203ENST00000573891 FXR2P51116 673 aaKnown RBP eCLIP8.35□□□□□ -1.07
CACNA1A-203ENST00000573891 ITPK1Q13572 414 aa8.35□□□□□ -1.07
CACNA1A-203ENST00000573891 IFFO2Q5TF58 517 aa8.35□□□□□ -1.07
CACNA1A-203ENST00000573891 EYA1Q99502 592 aa8.35□□□□□ -1.07
CACNA1A-203ENST00000573891 TMOD3Q9NYL9 352 aa8.35□□□□□ -1.07
CACNA1A-203ENST00000573891 ITGB4P16144 1822 aa8.35□□□□□ -1.07
CACNA1A-203ENST00000573891 KDRP35968 1356 aa8.35□□□□□ -1.07
CACNA1A-203ENST00000573891 CICQ96RK0 1608 aaPredicted RBP8.34□□□□□ -1.07
CACNA1A-203ENST00000573891 PPM1GO15355 546 aaPredicted RBP8.34□□□□□ -1.07
CACNA1A-203ENST00000573891 PHKG2P15735 406 aa8.34□□□□□ -1.07
CACNA1A-203ENST00000573891 HSPA6P17066 643 aa8.34□□□□□ -1.07
CACNA1A-203ENST00000573891 POLKQ9UBT6 870 aa8.34□□□□□ -1.07
CACNA1A-203ENST00000573891 ASAP1Q9ULH1 1129 aa8.34□□□□□ -1.07
CACNA1A-203ENST00000573891 PXDNLA1KZ92 1463 aa8.33□□□□□ -1.08
CACNA1A-203ENST00000573891 ATP6V1AP38606 617 aa8.33□□□□□ -1.08
CACNA1A-203ENST00000573891 IFNL2Q8IZJ0 200 aa8.33□□□□□ -1.08
CACNA1A-203ENST00000573891 ZNF526Q8TF50 670 aaPredicted RBP8.33□□□□□ -1.08
CACNA1A-203ENST00000573891 WWC3Q9ULE0 1092 aa8.33□□□□□ -1.08
CACNA1A-203ENST00000573891 KIF3CO14782 793 aa8.32□□□□□ -1.08
CACNA1A-203ENST00000573891 MMP10P09238 476 aa8.32□□□□□ -1.08
CACNA1A-203ENST00000573891 EIF4A2Q14240 407 aaKnown RBP8.32□□□□□ -1.08
CACNA1A-203ENST00000573891 EFCAB3Q8N7B9 438 aa8.32□□□□□ -1.08
CACNA1A-203ENST00000573891 SLC4A9Q96Q91 983 aa8.32□□□□□ -1.08
CACNA1A-203ENST00000573891 ATG3Q9NT62 314 aa8.32□□□□□ -1.08
CACNA1A-203ENST00000573891 C10orf71Q711Q0 1435 aa8.31□□□□□ -1.08
CACNA1A-203ENST00000573891 ERVV-2B6SEH9 535 aa8.31□□□□□ -1.08
CACNA1A-203ENST00000573891 CHADLQ6NUI6 762 aa8.31□□□□□ -1.08
CACNA1A-203ENST00000573891 ARIH1Q9Y4X5 557 aaPredicted RBP8.31□□□□□ -1.08
CACNA1A-203ENST00000573891 CNTNAP4Q9C0A0 1308 aa8.3□□□□□ -1.08
CACNA1A-203ENST00000573891 KIAA1551Q9HCM1 1747 aa8.3□□□□□ -1.08
CACNA1A-203ENST00000573891 TGFB2P61812 414 aa8.3□□□□□ -1.08
CACNA1A-203ENST00000573891 TRAPPC3LQ5T215 181 aa8.3□□□□□ -1.08
CACNA1A-203ENST00000573891 RC3H1Q5TC82 1133 aaKnown RBP8.3□□□□□ -1.08
CACNA1A-203ENST00000573891 SMYD5Q6GMV2 418 aa8.3□□□□□ -1.08
CACNA1A-203ENST00000573891 NLGN1Q8N2Q7 840 aa8.3□□□□□ -1.08
CACNA1A-203ENST00000573891 DCAF5Q96JK2 942 aa8.3□□□□□ -1.08
CACNA1A-203ENST00000573891 RTCBQ9Y3I0 505 aaKnown RBP8.3□□□□□ -1.08
CACNA1A-203ENST00000573891 ZNF831Q5JPB2 1677 aa8.3□□□□□ -1.08
CACNA1A-203ENST00000573891 KDM6AO15550 1401 aaPredicted RBP8.29□□□□□ -1.08
CACNA1A-203ENST00000573891 KIF13BQ9NQT8 1826 aa8.29□□□□□ -1.08
CACNA1A-203ENST00000573891 RPS6KA4O75676 772 aa8.29□□□□□ -1.08
CACNA1A-203ENST00000573891 HSP90AB1P08238 724 aaKnown RBP8.29□□□□□ -1.08
CACNA1A-203ENST00000573891 GYS1P13807 737 aa8.29□□□□□ -1.08
CACNA1A-203ENST00000573891 MFSD10Q14728 455 aa8.29□□□□□ -1.08
CACNA1A-203ENST00000573891 FARP1Q9Y4F1 1045 aaPredicted RBP8.29□□□□□ -1.08
CACNA1A-203ENST00000573891 A0A0G2JLW4 131 aa8.28□□□□□ -1.08
CACNA1A-203ENST00000573891 TNNT2P45379 298 aaPredicted RBP8.28□□□□□ -1.08
CACNA1A-203ENST00000573891 CCDC87Q9NVE4 849 aa8.28□□□□□ -1.08
CACNA1A-203ENST00000573891 BCS1LQ9Y276 419 aa8.28□□□□□ -1.08
CACNA1A-203ENST00000573891 C4AP0C0L4 1744 aa8.27□□□□□ -1.09
CACNA1A-203ENST00000573891 COL5A3P25940 1745 aaPredicted RBP8.27□□□□□ -1.09
CACNA1A-203ENST00000573891 DPEP1P16444 411 aa8.27□□□□□ -1.09
CACNA1A-203ENST00000573891 PDE4AP27815 886 aa8.27□□□□□ -1.09
CACNA1A-203ENST00000573891 RFC4P35249 363 aa8.27□□□□□ -1.09
CACNA1A-203ENST00000573891 CABP4P57796 275 aa8.27□□□□□ -1.09
CACNA1A-203ENST00000573891 AMOTQ4VCS5 1084 aa8.27□□□□□ -1.09
CACNA1A-203ENST00000573891 PLEKHO1Q53GL0 409 aaPredicted RBP8.27□□□□□ -1.09
CACNA1A-203ENST00000573891 ZNF530Q6P9A1 599 aaPredicted RBP8.27□□□□□ -1.09
CACNA1A-203ENST00000573891 LARP6Q9BRS8 491 aaKnown RBP8.27□□□□□ -1.09
CACNA1A-203ENST00000573891 PARP3Q9Y6F1 533 aa8.27□□□□□ -1.09
CACNA1A-203ENST00000573891 TOMM70O94826 608 aa8.26□□□□□ -1.09
CACNA1A-203ENST00000573891 FCHSD2O94868 740 aa8.26□□□□□ -1.09
CACNA1A-203ENST00000573891 KCNA3P22001 575 aa8.26□□□□□ -1.09
CACNA1A-203ENST00000573891 CRKLP46109 303 aaKnown RBP8.26□□□□□ -1.09
CACNA1A-203ENST00000573891 APLP1P51693 650 aa8.26□□□□□ -1.09
CACNA1A-203ENST00000573891 TRIM26Q12899 539 aaPredicted RBP8.26□□□□□ -1.09
CACNA1A-203ENST00000573891 IFNL1Q8IU54 200 aa8.26□□□□□ -1.09
CACNA1A-203ENST00000573891 USP42Q9H9J4 1324 aaKnown RBP8.26□□□□□ -1.09
CACNA1A-203ENST00000573891 N4BP2Q86UW6 1770 aaPredicted RBP8.25□□□□□ -1.09
CACNA1A-203ENST00000573891 MYH14Q7Z406 1995 aaKnown RBP8.25□□□□□ -1.09
CACNA1A-203ENST00000573891 PTCD1O75127 700 aaKnown RBP8.25□□□□□ -1.09
CACNA1A-203ENST00000573891 MTHFSP49914 203 aa8.25□□□□□ -1.09
CACNA1A-203ENST00000573891 ARHGAP27Q6ZUM4 889 aa8.25□□□□□ -1.09
CACNA1A-203ENST00000573891 AEBP1Q8IUX7 1158 aa8.25□□□□□ -1.09
CACNA1A-203ENST00000573891 DNAJC5GQ8N7S2 189 aa8.25□□□□□ -1.09
CACNA1A-203ENST00000573891 SP7Q8TDD2 431 aaPredicted RBP8.25□□□□□ -1.09
CACNA1A-203ENST00000573891 CRISPLD2Q9H0B8 497 aa8.25□□□□□ -1.09
CACNA1A-203ENST00000573891 NMRK2Q9NPI5 230 aa8.25□□□□□ -1.09
CACNA1A-203ENST00000573891 PODXL2Q9NZ53 605 aa8.25□□□□□ -1.09
CACNA1A-203ENST00000573891 CLSPNQ9HAW4 1339 aa8.25□□□□□ -1.09
CACNA1A-203ENST00000573891 BRCA1P38398 1863 aaKnown RBP8.24□□□□□ -1.09
CACNA1A-203ENST00000573891 DDR1Q08345 913 aa8.24□□□□□ -1.09
CACNA1A-203ENST00000573891 CAMK2BQ13554 666 aa8.24□□□□□ -1.09
CACNA1A-203ENST00000573891 C1orf141Q5JVX7 400 aa8.24□□□□□ -1.09
CACNA1A-203ENST00000573891 NFATC2IPQ8NCF5 419 aa8.24□□□□□ -1.09
CACNA1A-203ENST00000573891 POLR3GLQ9BT43 218 aa8.24□□□□□ -1.09
CACNA1A-203ENST00000573891 PANK3Q9H999 370 aa8.24□□□□□ -1.09
CACNA1A-203ENST00000573891 PIM2Q9P1W9 311 aa8.24□□□□□ -1.09
CACNA1A-203ENST00000573891 SRP68Q9UHB9 627 aaKnown RBP8.24□□□□□ -1.09
CACNA1A-203ENST00000573891 DALRD3Q5D0E6 543 aaKnown RBP8.23□□□□□ -1.09
CACNA1A-203ENST00000573891 C9orf131Q5VYM1 1079 aa8.23□□□□□ -1.09
CACNA1A-203ENST00000573891 INTS5Q6P9B9 1019 aaKnown RBP8.23□□□□□ -1.09
CACNA1A-203ENST00000573891 RBM46Q8TBY0 533 aaKnown RBP8.23□□□□□ -1.09
CACNA1A-203ENST00000573891 TJP1Q07157 1748 aa8.23□□□□□ -1.09
CACNA1A-203ENST00000573891 ARFGEF1Q9Y6D6 1849 aa8.22□□□□□ -1.09
CACNA1A-203ENST00000573891 ADAMTS7Q9UKP4 1686 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms